RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 Q6ZUG5 572 aa20.6■□□□□ 0.89
HSPG2-208ENST00000471322 LARP6Q9BRS8 491 aaKnown RBP20.6■□□□□ 0.89
HSPG2-208ENST00000471322 CREBZFQ9NS37 354 aa20.6■□□□□ 0.89
HSPG2-208ENST00000471322 MYO5AQ9Y4I1 1855 aaKnown RBP20.6■□□□□ 0.89
HSPG2-208ENST00000471322 RASA3Q14644 834 aa20.6■□□□□ 0.89
HSPG2-208ENST00000471322 NAA16Q6N069 864 aaPredicted RBP20.6■□□□□ 0.89
HSPG2-208ENST00000471322 CDAN1Q8IWY9 1227 aa20.6■□□□□ 0.89
HSPG2-208ENST00000471322 NCOA7Q8NI08 942 aa20.6■□□□□ 0.89
HSPG2-208ENST00000471322 FZD1Q9UP38 647 aa20.6■□□□□ 0.89
HSPG2-208ENST00000471322 MYH2Q9UKX2 1941 aa20.59■□□□□ 0.89
HSPG2-208ENST00000471322 MROH7-TTC4A0A0A0MT08 1334 aa20.59■□□□□ 0.89
HSPG2-208ENST00000471322 WDR19Q8NEZ3 1342 aa20.59■□□□□ 0.89
HSPG2-208ENST00000471322 DOCK2Q92608 1830 aa20.59■□□□□ 0.89
HSPG2-208ENST00000471322 BTDP43251 543 aa20.59■□□□□ 0.89
HSPG2-208ENST00000471322 TRDNQ13061 729 aa20.59■□□□□ 0.89
HSPG2-208ENST00000471322 PRKG1Q13976 671 aa20.59■□□□□ 0.89
HSPG2-208ENST00000471322 CCDC83Q8IWF9 413 aa20.59■□□□□ 0.89
HSPG2-208ENST00000471322 TCEANC2Q96MN5 208 aa20.59■□□□□ 0.89
HSPG2-208ENST00000471322 AGXT2Q9BYV1 514 aa20.59■□□□□ 0.89
HSPG2-208ENST00000471322 TMEM39BQ9GZU3 492 aa20.59■□□□□ 0.89
HSPG2-208ENST00000471322 ARMT1Q9H993 441 aa20.59■□□□□ 0.89
HSPG2-208ENST00000471322 USP40Q9NVE5 1235 aa20.59■□□□□ 0.89
HSPG2-208ENST00000471322 MKRN1Q9UHC7 482 aaKnown RBP20.59■□□□□ 0.89
HSPG2-208ENST00000471322 GAKO14976 1311 aa20.58■□□□□ 0.89
HSPG2-208ENST00000471322 MAGEB6P1A0A0J9YX57 407 aa20.58■□□□□ 0.89
HSPG2-208ENST00000471322 BRD1O95696 1058 aa20.58■□□□□ 0.89
HSPG2-208ENST00000471322 MOB2Q70IA6 237 aa20.58■□□□□ 0.89
HSPG2-208ENST00000471322 RALYLQ86SE5 291 aaKnown RBP20.58■□□□□ 0.89
HSPG2-208ENST00000471322 ADGRA1Q86SQ6 560 aa20.58■□□□□ 0.89
HSPG2-208ENST00000471322 IFNL3Q8IZI9 196 aa20.58■□□□□ 0.89
HSPG2-208ENST00000471322 NAPBQ9H115 298 aa20.58■□□□□ 0.89
HSPG2-208ENST00000471322 ECM29Q5VYK3 1845 aa20.58■□□□□ 0.88
HSPG2-208ENST00000471322 WDR33Q9C0J8 1336 aaKnown RBP20.57■□□□□ 0.88
HSPG2-208ENST00000471322 LARGE1O95461 756 aa20.57■□□□□ 0.88
HSPG2-208ENST00000471322 MCM5P33992 734 aa20.57■□□□□ 0.88
HSPG2-208ENST00000471322 HAND2P61296 217 aa20.57■□□□□ 0.88
HSPG2-208ENST00000471322 TCP10Q12799 353 aa20.57■□□□□ 0.88
HSPG2-208ENST00000471322 NFIAQ12857 509 aa20.57■□□□□ 0.88
HSPG2-208ENST00000471322 SLF2Q8IX21 1173 aa20.57■□□□□ 0.88
HSPG2-208ENST00000471322 TMOD2Q9NZR1 351 aa20.57■□□□□ 0.88
HSPG2-208ENST00000471322 SLC4A4Q9Y6R1 1079 aa20.57■□□□□ 0.88
HSPG2-208ENST00000471322 TRPM7Q96QT4 1865 aa20.57■□□□□ 0.88
HSPG2-208ENST00000471322 GSTO1P78417 241 aa20.56■□□□□ 0.88
HSPG2-208ENST00000471322 GRM1Q13255 1194 aa20.56■□□□□ 0.88
HSPG2-208ENST00000471322 COL9A3Q14050 684 aaPredicted RBP20.56■□□□□ 0.88
HSPG2-208ENST00000471322 NBPF12Q5TAG4 269 aaPredicted RBP20.56■□□□□ 0.88
HSPG2-208ENST00000471322 GSG1L2A8MUP6 293 aa20.56■□□□□ 0.88
HSPG2-208ENST00000471322 BAG4O95429 457 aaKnown RBP20.56■□□□□ 0.88
HSPG2-208ENST00000471322 TNFAIP1Q13829 316 aa20.56■□□□□ 0.88
HSPG2-208ENST00000471322 TTLL12Q14166 644 aaPredicted RBP20.56■□□□□ 0.88
HSPG2-208ENST00000471322 PAXIP1Q6ZW49 1069 aaPredicted RBP20.56■□□□□ 0.88
HSPG2-208ENST00000471322 LCORLQ8N3X6 602 aa20.56■□□□□ 0.88
HSPG2-208ENST00000471322 BRF1Q92994 677 aa20.56■□□□□ 0.88
HSPG2-208ENST00000471322 FAM163AQ96GL9 167 aaPredicted RBP20.56■□□□□ 0.88
HSPG2-208ENST00000471322 GBA2Q9HCG7 927 aaPredicted RBP20.56■□□□□ 0.88
HSPG2-208ENST00000471322 AATFQ9NY61 560 aaKnown RBP eCLIP20.56■□□□□ 0.88
HSPG2-208ENST00000471322 ZDHHC9Q9Y397 364 aa20.56■□□□□ 0.88
HSPG2-208ENST00000471322 CNTNAP1P78357 1384 aa20.55■□□□□ 0.88
HSPG2-208ENST00000471322 PKP1Q13835 747 aa20.55■□□□□ 0.88
HSPG2-208ENST00000471322 MIGA1Q8NAN2 632 aa20.55■□□□□ 0.88
HSPG2-208ENST00000471322 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.55■□□□□ 0.88
HSPG2-208ENST00000471322 GPR75-ASB3A0A0A6YYF3 556 aa20.54■□□□□ 0.88
HSPG2-208ENST00000471322 LDHCP07864 332 aa20.54■□□□□ 0.88
HSPG2-208ENST00000471322 PDCP20941 246 aa20.54■□□□□ 0.88
HSPG2-208ENST00000471322 PICALMQ13492 652 aa20.54■□□□□ 0.88
HSPG2-208ENST00000471322 GIMAP6Q6P9H5 292 aa20.54■□□□□ 0.88
HSPG2-208ENST00000471322 SAPCD2Q86UD0 394 aa20.54■□□□□ 0.88
HSPG2-208ENST00000471322 ZFPM1Q8IX07 1006 aa20.54■□□□□ 0.88
HSPG2-208ENST00000471322 MB21D2Q8IYB1 491 aaPredicted RBP20.54■□□□□ 0.88
HSPG2-208ENST00000471322 DNAJC5GQ8N7S2 189 aa20.54■□□□□ 0.88
HSPG2-208ENST00000471322 C2orf69Q8N8R5 385 aa20.54■□□□□ 0.88
HSPG2-208ENST00000471322 NECAB1Q8N987 351 aa20.54■□□□□ 0.88
HSPG2-208ENST00000471322 GTF3C6Q969F1 213 aa20.54■□□□□ 0.88
HSPG2-208ENST00000471322 ZNF274Q96GC6 653 aaPredicted RBP20.54■□□□□ 0.88
HSPG2-208ENST00000471322 PFKFB2O60825 505 aa20.53■□□□□ 0.88
HSPG2-208ENST00000471322 GJB2P29033 226 aa20.53■□□□□ 0.88
HSPG2-208ENST00000471322 TDO2P48775 406 aa20.53■□□□□ 0.88
HSPG2-208ENST00000471322 TNNI2P48788 182 aa20.53■□□□□ 0.88
HSPG2-208ENST00000471322 HUNKP57058 714 aa20.53■□□□□ 0.88
HSPG2-208ENST00000471322 EVCP57679 992 aa20.53■□□□□ 0.88
HSPG2-208ENST00000471322 SKOR2Q2VWA4 1001 aaPredicted RBP20.53■□□□□ 0.88
HSPG2-208ENST00000471322 RIOK1Q9BRS2 568 aaKnown RBP20.53■□□□□ 0.88
HSPG2-208ENST00000471322 LLPHQ9BRT6 129 aaKnown RBP20.53■□□□□ 0.88
HSPG2-208ENST00000471322 CNNM2Q9H8M5 875 aa20.53■□□□□ 0.88
HSPG2-208ENST00000471322 EPB41L4AQ9HCS5 686 aaPredicted RBP20.53■□□□□ 0.88
HSPG2-208ENST00000471322 FAM198AQ9UFP1 575 aa20.53■□□□□ 0.88
HSPG2-208ENST00000471322 TLL2Q9Y6L7 1015 aa20.53■□□□□ 0.88
HSPG2-208ENST00000471322 PRC1O43663 620 aa20.53■□□□□ 0.88
HSPG2-208ENST00000471322 NF2P35240 595 aa20.53■□□□□ 0.88
HSPG2-208ENST00000471322 RHBDL3P58872 404 aa20.53■□□□□ 0.88
HSPG2-208ENST00000471322 DYNLL1P63167 89 aaKnown RBP20.53■□□□□ 0.88
HSPG2-208ENST00000471322 SH3RF3Q8TEJ3 882 aaPredicted RBP20.53■□□□□ 0.88
HSPG2-208ENST00000471322 TEPSINQ96N21 525 aa20.53■□□□□ 0.88
HSPG2-208ENST00000471322 UBE2Q2LH0YL09 131 aa20.52■□□□□ 0.88
HSPG2-208ENST00000471322 ST3GAL1Q11201 340 aa20.52■□□□□ 0.88
HSPG2-208ENST00000471322 DEFB115Q30KQ5 88 aa20.52■□□□□ 0.88
HSPG2-208ENST00000471322 LRRC2Q9BYS8 371 aa20.52■□□□□ 0.88
HSPG2-208ENST00000471322 KRT23Q9C075 422 aa20.52■□□□□ 0.88
HSPG2-208ENST00000471322 RNF41Q9H4P4 317 aaPredicted RBP20.52■□□□□ 0.88
HSPG2-208ENST00000471322 DDX4Q9NQI0 724 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms