RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 NFXL1Q6ZNB6 911 aa30.44■■■□□ 2.46
U2AF1-208ENST00000471250 ZKSCAN3Q9BRR0 538 aa30.44■■■□□ 2.46
U2AF1-208ENST00000471250 PTPDC1A2A3K4 754 aa30.43■■■□□ 2.46
U2AF1-208ENST00000471250 PRDM1O75626 825 aa30.43■■■□□ 2.46
U2AF1-208ENST00000471250 UBAC1Q9BSL1 405 aa30.43■■■□□ 2.46
U2AF1-208ENST00000471250 ADAMTSL1Q8N6G6 1762 aa30.43■■■□□ 2.46
U2AF1-208ENST00000471250 CCDC69A6NI79 296 aa30.42■■■□□ 2.46
U2AF1-208ENST00000471250 RANBP6O60518 1105 aaKnown RBP30.42■■■□□ 2.46
U2AF1-208ENST00000471250 POLR3DP05423 398 aaPredicted RBP30.42■■■□□ 2.46
U2AF1-208ENST00000471250 PTMSP20962 102 aa30.42■■■□□ 2.46
U2AF1-208ENST00000471250 CRKP46108 304 aa30.42■■■□□ 2.46
U2AF1-208ENST00000471250 PTGER2P43116 358 aa30.42■■■□□ 2.46
U2AF1-208ENST00000471250 SEC23AQ15436 765 aa30.42■■■□□ 2.46
U2AF1-208ENST00000471250 DDX11Q96FC9 970 aa30.42■■■□□ 2.46
U2AF1-208ENST00000471250 ZNF277Q9NRM2 450 aaPredicted RBP30.42■■■□□ 2.46
U2AF1-208ENST00000471250 MYH1P12882 1939 aa30.42■■■□□ 2.46
U2AF1-208ENST00000471250 GOLGA6L22H0YM25 854 aa30.41■■■□□ 2.46
U2AF1-208ENST00000471250 ZBTB43O43298 467 aa30.41■■■□□ 2.46
U2AF1-208ENST00000471250 F13A1P00488 732 aa30.41■■■□□ 2.46
U2AF1-208ENST00000471250 METAP2P50579 478 aaKnown RBP eCLIP30.41■■■□□ 2.46
U2AF1-208ENST00000471250 KIAA0825Q8IV33 1275 aa30.41■■■□□ 2.46
U2AF1-208ENST00000471250 LARGE2Q8N3Y3 721 aa30.41■■■□□ 2.46
U2AF1-208ENST00000471250 FAM184AQ8NB25 1140 aa30.41■■■□□ 2.46
U2AF1-208ENST00000471250 ZDHHC15Q96MV8 337 aa30.41■■■□□ 2.46
U2AF1-208ENST00000471250 SAP30BPQ9UHR5 308 aaKnown RBP30.41■■■□□ 2.46
U2AF1-208ENST00000471250 SLC12A7Q9Y666 1083 aa30.41■■■□□ 2.46
U2AF1-208ENST00000471250 TNKSO95271 1327 aa30.4■■■□□ 2.46
U2AF1-208ENST00000471250 APOBEC3HQ6NTF7 200 aaKnown RBP30.4■■■□□ 2.46
U2AF1-208ENST00000471250 RAB11FIP4Q86YS3 637 aa30.4■■■□□ 2.46
U2AF1-208ENST00000471250 ZSCAN10Q96SZ4 725 aaPredicted RBP30.4■■■□□ 2.46
U2AF1-208ENST00000471250 USP40Q9NVE5 1235 aa30.4■■■□□ 2.46
U2AF1-208ENST00000471250 NID2Q14112 1375 aa30.4■■■□□ 2.46
U2AF1-208ENST00000471250 SYNE3Q6ZMZ3 975 aa30.39■■■□□ 2.46
U2AF1-208ENST00000471250 IQCA1Q86XH1 822 aa30.39■■■□□ 2.46
U2AF1-208ENST00000471250 PPP1R1BQ9UD71 204 aaPredicted RBP30.39■■■□□ 2.46
U2AF1-208ENST00000471250 KIF3AQ9Y496 699 aa30.39■■■□□ 2.46
U2AF1-208ENST00000471250 VPS37CA5D8V6 355 aaPredicted RBP30.39■■■□□ 2.45
U2AF1-208ENST00000471250 PLCD1P51178 756 aa30.39■■■□□ 2.45
U2AF1-208ENST00000471250 SLC4A8Q2Y0W8 1093 aa30.39■■■□□ 2.45
U2AF1-208ENST00000471250 MCTP1Q6DN14 999 aa30.39■■■□□ 2.45
U2AF1-208ENST00000471250 ECM29Q5VYK3 1845 aa30.38■■■□□ 2.45
U2AF1-208ENST00000471250 CDC42EP5Q6NZY7 148 aa30.38■■■□□ 2.45
U2AF1-208ENST00000471250 DYNLL2Q96FJ2 89 aa30.38■■■□□ 2.45
U2AF1-208ENST00000471250 COL4A5P29400 1685 aa30.38■■■□□ 2.45
U2AF1-208ENST00000471250 FER1L6Q2WGJ9 1857 aa30.38■■■□□ 2.45
U2AF1-208ENST00000471250 CPLX1O14810 134 aa30.37■■■□□ 2.45
U2AF1-208ENST00000471250 WDHD1O75717 1129 aaPredicted RBP30.37■■■□□ 2.45
U2AF1-208ENST00000471250 RCAN1P53805 252 aa30.37■■■□□ 2.45
U2AF1-208ENST00000471250 MICU3Q86XE3 530 aa30.37■■■□□ 2.45
U2AF1-208ENST00000471250 SERPINA10Q9UK55 444 aa30.37■■■□□ 2.45
U2AF1-208ENST00000471250 GOLGA8AA7E2F4 631 aa30.36■■■□□ 2.45
U2AF1-208ENST00000471250 ENAHQ8N8S7 591 aaPredicted RBP30.36■■■□□ 2.45
U2AF1-208ENST00000471250 IARSP41252 1262 aaKnown RBP30.36■■■□□ 2.45
U2AF1-208ENST00000471250 ATP6V1DQ9Y5K8 247 aa30.36■■■□□ 2.45
U2AF1-208ENST00000471250 MYO3BQ8WXR4 1341 aa30.35■■■□□ 2.45
U2AF1-208ENST00000471250 FDPSP14324 419 aaKnown RBP30.35■■■□□ 2.45
U2AF1-208ENST00000471250 CDC27P30260 824 aa30.35■■■□□ 2.45
U2AF1-208ENST00000471250 FAM47AQ5JRC9 791 aa30.35■■■□□ 2.45
U2AF1-208ENST00000471250 C16orf86Q6ZW13 317 aa30.35■■■□□ 2.45
U2AF1-208ENST00000471250 CDC37L1Q7L3B6 337 aa30.35■■■□□ 2.45
U2AF1-208ENST00000471250 KLHL34Q8N239 644 aa30.35■■■□□ 2.45
U2AF1-208ENST00000471250 MYL10Q9BUA6 226 aa30.35■■■□□ 2.45
U2AF1-208ENST00000471250 MKNK2Q9HBH9 465 aa30.35■■■□□ 2.45
U2AF1-208ENST00000471250 FAM217BQ9NTX9 383 aaPredicted RBP30.35■■■□□ 2.45
U2AF1-208ENST00000471250 TSPY2A6NKD2 308 aa30.34■■■□□ 2.45
U2AF1-208ENST00000471250 RXRAP19793 462 aa30.34■■■□□ 2.45
U2AF1-208ENST00000471250 ADD1P35611 737 aaKnown RBP30.34■■■□□ 2.45
U2AF1-208ENST00000471250 ZNF654Q8IZM8 581 aa30.34■■■□□ 2.45
U2AF1-208ENST00000471250 CHAMP1Q96JM3 812 aa30.34■■■□□ 2.45
U2AF1-208ENST00000471250 ZNF287Q9HBT7 754 aa30.34■■■□□ 2.45
U2AF1-208ENST00000471250 DDX4Q9NQI0 724 aaKnown RBP30.34■■■□□ 2.45
U2AF1-208ENST00000471250 CDKL5O76039 1030 aa30.33■■■□□ 2.45
U2AF1-208ENST00000471250 VIL1P09327 827 aaKnown RBP30.33■■■□□ 2.45
U2AF1-208ENST00000471250 RSBN1LQ6PCB5 846 aaPredicted RBP30.33■■■□□ 2.45
U2AF1-208ENST00000471250 CPLX2Q6PUV4 134 aaKnown RBP30.33■■■□□ 2.45
U2AF1-208ENST00000471250 NIM1KQ8IY84 436 aa30.33■■■□□ 2.45
U2AF1-208ENST00000471250 PICALMQ13492 652 aa30.33■■■□□ 2.45
U2AF1-208ENST00000471250 IFIT1BQ5T764 474 aaKnown RBP30.33■■■□□ 2.45
U2AF1-208ENST00000471250 ZNRF3Q9ULT6 936 aa30.33■■■□□ 2.45
U2AF1-208ENST00000471250 TRAK2O60296 914 aa30.32■■■□□ 2.44
U2AF1-208ENST00000471250 TFAP4Q01664 338 aa30.32■■■□□ 2.44
U2AF1-208ENST00000471250 TTC6Q86TZ1 520 aa30.32■■■□□ 2.44
U2AF1-208ENST00000471250 TAOK3Q9H2K8 898 aa30.32■■■□□ 2.44
U2AF1-208ENST00000471250 ORC3Q9UBD5 711 aaPredicted RBP30.32■■■□□ 2.44
U2AF1-208ENST00000471250 CDK8P49336 464 aa30.31■■■□□ 2.44
U2AF1-208ENST00000471250 RBM5P52756 815 aaKnown RBP eCLIP30.31■■■□□ 2.44
U2AF1-208ENST00000471250 NTRK3Q16288 839 aa30.31■■■□□ 2.44
U2AF1-208ENST00000471250 CCDC144CPQ8IYA2 1237 aa30.31■■■□□ 2.44
U2AF1-208ENST00000471250 ZNF444Q8N0Y2 327 aaPredicted RBP30.31■■■□□ 2.44
U2AF1-208ENST00000471250 LMBRD1Q9NUN5 540 aa30.31■■■□□ 2.44
U2AF1-208ENST00000471250 H3BQV1 296 aa30.3■■■□□ 2.44
U2AF1-208ENST00000471250 PSMD14O00487 310 aa30.3■■■□□ 2.44
U2AF1-208ENST00000471250 RAD17O75943 681 aa30.3■■■□□ 2.44
U2AF1-208ENST00000471250 RASA1P20936 1047 aa30.3■■■□□ 2.44
U2AF1-208ENST00000471250 IFFO2Q5TF58 517 aa30.3■■■□□ 2.44
U2AF1-208ENST00000471250 SLC44A5Q8NCS7 719 aa30.3■■■□□ 2.44
U2AF1-208ENST00000471250 GMLQ99445 158 aa30.3■■■□□ 2.44
U2AF1-208ENST00000471250 OSBPL5Q9H0X9 879 aaPredicted RBP30.3■■■□□ 2.44
U2AF1-208ENST00000471250 PCDHAC2Q9Y5I4 1007 aa30.3■■■□□ 2.44
U2AF1-208ENST00000471250 RTN1Q16799 776 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms