RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-233	ENST00000470710	ATRNL1	Q5VV63	1379 aa		10.27	□□□□□ -0.76
HDLBP-233	ENST00000470710	SMIM22	K7EJ46	135 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	WNT10B	O00744	389 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	MYO1B	O43795	1136 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	KDM4A	O75164	1064 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	SLC4A3	P48751	1232 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	PLCD1	P51178	756 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	EVC	P57679	992 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	EVX2	Q03828	476 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	PICALM	Q13492	652 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	CUL4A	Q13619	759 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710		Q6ZUG5	572 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	CYB5R4	Q7L1T6	521 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	TMEM87B	Q96K49	555 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	TCEANC2	Q96MN5	208 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	EHD4	Q9H223	541 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	INCENP	Q9NQS7	918 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	ZSWIM5	Q9P217	1185 aa		10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	CNOT7	Q9UIV1	285 aa	Known RBP	10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	DDX60L	Q5H9U9	1706 aa	Known RBP	10.27	□□□□□ -0.77
HDLBP-233	ENST00000470710	SHTN1	A0MZ66	631 aa		10.26	□□□□□ -0.77
HDLBP-233	ENST00000470710		H7C1D1	291 aa		10.26	□□□□□ -0.77
HDLBP-233	ENST00000470710	SH2B2	O14492	632 aa	Predicted RBP	10.26	□□□□□ -0.77
HDLBP-233	ENST00000470710	HLA-DOA	P06340	250 aa		10.26	□□□□□ -0.77
HDLBP-233	ENST00000470710	CACNB3	P54284	484 aa		10.26	□□□□□ -0.77
HDLBP-233	ENST00000470710	FGD1	P98174	961 aa		10.26	□□□□□ -0.77
HDLBP-233	ENST00000470710	GABPA	Q06546	454 aa		10.26	□□□□□ -0.77
HDLBP-233	ENST00000470710	RRP12	Q5JTH9	1297 aa	Known RBP	10.26	□□□□□ -0.77
HDLBP-233	ENST00000470710	NKX2-3	Q8TAU0	364 aa		10.26	□□□□□ -0.77
HDLBP-233	ENST00000470710	DYNLL2	Q96FJ2	89 aa		10.26	□□□□□ -0.77
HDLBP-233	ENST00000470710	TOMM22	Q9NS69	142 aa		10.26	□□□□□ -0.77
HDLBP-233	ENST00000470710	GPRC5D	Q9NZD1	345 aa		10.26	□□□□□ -0.77
HDLBP-233	ENST00000470710	TPCN1	Q9ULQ1	816 aa		10.26	□□□□□ -0.77
HDLBP-233	ENST00000470710	ADAMTSL1	Q8N6G6	1762 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	CLRN2	A0PK11	232 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	RANBP6	O60518	1105 aa	Known RBP	10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	PRDM1	O75626	825 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	LIFR	P42702	1097 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	CDK8	P49336	464 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	SART3	Q15020	963 aa	Known RBP	10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	KIF4B	Q2VIQ3	1234 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	NBPF9	Q3BBW0	867 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	NOL8	Q76FK4	1167 aa	Known RBP	10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	SH3BP5L	Q7L8J4	393 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	CHST3	Q7LGC8	479 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	FAM83A	Q86UY5	434 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	SGMS1	Q86VZ5	419 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	METTL16	Q86W50	562 aa	Known RBP	10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	ZFPM1	Q8IX07	1006 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	IGDCC4	Q8TDY8	1250 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	FAM151A	Q8WW52	585 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	BRF1	Q92994	677 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	INTS4	Q96HW7	963 aa	Known RBP	10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	LRRC2	Q9BYS8	371 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	MKNK2	Q9HBH9	465 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	PI4KB	Q9UBF8	816 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	SWAP70	Q9UH65	585 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	SERPINB13	Q9UIV8	391 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	ANGEL1	Q9UNK9	670 aa	Known RBP	10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	NAV1	Q8NEY1	1877 aa		10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	DICER1	Q9UPY3	1922 aa	Known RBP	10.25	□□□□□ -0.77
HDLBP-233	ENST00000470710	SBF1	O95248	1867 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	DDTL	A6NHG4	134 aa	Predicted RBP	10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	IFIT3	O14879	490 aa	Known RBP	10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	EGFR	P00533	1210 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	RASA1	P20936	1047 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	TCP10	Q12799	353 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	TNFAIP1	Q13829	316 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	ME3	Q16798	604 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	SLC4A8	Q2Y0W8	1093 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	CCDC178	Q5BJE1	867 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	TMEM67	Q5HYA8	995 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	SAMD7	Q7Z3H4	446 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	IQCA1	Q86XH1	822 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	FOXP4	Q8IVH2	680 aa	Predicted RBP	10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	STK11IP	Q8N1F8	1099 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	TMTC2	Q8N394	836 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	SLC44A5	Q8NCS7	719 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	ZNF274	Q96GC6	653 aa	Predicted RBP	10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	UBAC1	Q9BSL1	405 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	LY9	Q9HBG7	655 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	GPHN	Q9NQX3	736 aa	Predicted RBP	10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	TCP11L1	Q9NUJ3	509 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	CNTNAP1	P78357	1384 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	PLIN4	Q96Q06	1357 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	LAMB1	P07942	1786 aa		10.24	□□□□□ -0.77
HDLBP-233	ENST00000470710	FOCAD	Q5VW36	1801 aa		10.23	□□□□□ -0.77
HDLBP-233	ENST00000470710	BAZ2A	Q9UIF9	1905 aa	Known RBP	10.23	□□□□□ -0.77
HDLBP-233	ENST00000470710	ERICH2	A1L162	156 aa		10.23	□□□□□ -0.77
HDLBP-233	ENST00000470710	TCP10L2	B9ZVM9	353 aa		10.23	□□□□□ -0.77
HDLBP-233	ENST00000470710	PFKFB2	O60825	505 aa		10.23	□□□□□ -0.77
HDLBP-233	ENST00000470710	DDN	O94850	711 aa	Predicted RBP	10.23	□□□□□ -0.77
HDLBP-233	ENST00000470710	LARGE1	O95461	756 aa		10.23	□□□□□ -0.77
HDLBP-233	ENST00000470710	HSP90AA1	P07900	732 aa	Known RBP	10.23	□□□□□ -0.77
HDLBP-233	ENST00000470710	LMOD1	P29536	600 aa	Predicted RBP	10.23	□□□□□ -0.77
HDLBP-233	ENST00000470710	RCAN1	P53805	252 aa		10.23	□□□□□ -0.77
HDLBP-233	ENST00000470710	APOBR	Q0VD83	1088 aa		10.23	□□□□□ -0.77
HDLBP-233	ENST00000470710	WTAP	Q15007	396 aa		10.23	□□□□□ -0.77
HDLBP-233	ENST00000470710	SEC23A	Q15436	765 aa		10.23	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms