RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 SEC23AQ15436 765 aa9.82□□□□□ -0.84
GTF3A-206ENST00000470606 SOGA3Q5TF21 947 aa9.82□□□□□ -0.84
GTF3A-206ENST00000470606 RSBN1LQ6PCB5 846 aaPredicted RBP9.82□□□□□ -0.84
GTF3A-206ENST00000470606 SLF2Q8IX21 1173 aa9.82□□□□□ -0.84
GTF3A-206ENST00000470606 ZNF274Q96GC6 653 aaPredicted RBP9.82□□□□□ -0.84
GTF3A-206ENST00000470606 PRMT6Q96LA8 375 aaPredicted RBP9.82□□□□□ -0.84
GTF3A-206ENST00000470606 KRT23Q9C075 422 aa9.82□□□□□ -0.84
GTF3A-206ENST00000470606 TOMM22Q9NS69 142 aa9.82□□□□□ -0.84
GTF3A-206ENST00000470606 FAM217BQ9NTX9 383 aaPredicted RBP9.82□□□□□ -0.84
GTF3A-206ENST00000470606 USP40Q9NVE5 1235 aa9.82□□□□□ -0.84
GTF3A-206ENST00000470606 ROBO3Q96MS0 1386 aa9.81□□□□□ -0.84
GTF3A-206ENST00000470606 KLF18A0A0U1RQI7 1052 aa9.81□□□□□ -0.84
GTF3A-206ENST00000470606 ORC4O43929 436 aa9.81□□□□□ -0.84
GTF3A-206ENST00000470606 GJB2P29033 226 aa9.81□□□□□ -0.84
GTF3A-206ENST00000470606 PICALMQ13492 652 aa9.81□□□□□ -0.84
GTF3A-206ENST00000470606 FAM47AQ5JRC9 791 aa9.81□□□□□ -0.84
GTF3A-206ENST00000470606 SGMS1Q86VZ5 419 aa9.81□□□□□ -0.84
GTF3A-206ENST00000470606 NOL10Q9BSC4 688 aaKnown RBP9.81□□□□□ -0.84
GTF3A-206ENST00000470606 MYL10Q9BUA6 226 aa9.81□□□□□ -0.84
GTF3A-206ENST00000470606 VPS33BQ9H267 617 aa9.81□□□□□ -0.84
GTF3A-206ENST00000470606 CNNM2Q9H8M5 875 aa9.81□□□□□ -0.84
GTF3A-206ENST00000470606 IFIT3O14879 490 aaKnown RBP9.8□□□□□ -0.84
GTF3A-206ENST00000470606 BRD1O95696 1058 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 PLCG2P16885 1265 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 SYT1P21579 422 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 CDC27P30260 824 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 HDLBPQ00341 1268 aaKnown RBP9.8□□□□□ -0.84
GTF3A-206ENST00000470606 NBR1Q14596 966 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 TMEM67Q5HYA8 995 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 FOXD4L5Q5VV16 416 aaPredicted RBP9.8□□□□□ -0.84
GTF3A-206ENST00000470606 APOA5Q6Q788 366 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 SH3BP5LQ7L8J4 393 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 ENAHQ8N8S7 591 aaPredicted RBP9.8□□□□□ -0.84
GTF3A-206ENST00000470606 NSUN7Q8NE18 718 aaKnown RBP9.8□□□□□ -0.84
GTF3A-206ENST00000470606 SMARCC2Q8TAQ2 1214 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 FOXD4L4Q8WXT5 416 aaPredicted RBP9.8□□□□□ -0.84
GTF3A-206ENST00000470606 TMEM87BQ96K49 555 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 RNF41Q9H4P4 317 aaPredicted RBP9.8□□□□□ -0.84
GTF3A-206ENST00000470606 IL17RBQ9NRM6 502 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 FAM198AQ9UFP1 575 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 SERPINA10Q9UK55 444 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 LTBP3Q9NS15 1303 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 RANBP6O60518 1105 aaKnown RBP9.8□□□□□ -0.84
GTF3A-206ENST00000470606 EGFRP00533 1210 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 MYH8P13535 1937 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 FDPSP14324 419 aaKnown RBP9.8□□□□□ -0.84
GTF3A-206ENST00000470606 LIFRP42702 1097 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 GABPAQ06546 454 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 CFAP100Q494V2 611 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 RCSD1Q6JBY9 416 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 CERS3Q8IU89 383 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 NIM1KQ8IY84 436 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 ESR2Q92731 530 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 SYT17Q9BSW7 474 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 TDRD3Q9H7E2 651 aaKnown RBP9.8□□□□□ -0.84
GTF3A-206ENST00000470606 DICER1Q9UPY3 1922 aaKnown RBP9.8□□□□□ -0.84
GTF3A-206ENST00000470606 SMC3Q9UQE7 1217 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.8□□□□□ -0.84
GTF3A-206ENST00000470606 TNKSO95271 1327 aa9.8□□□□□ -0.84
GTF3A-206ENST00000470606 GOLGA8BA8MQT2 603 aa9.79□□□□□ -0.84
GTF3A-206ENST00000470606 UBE2Q2LH0YL09 131 aa9.79□□□□□ -0.84
GTF3A-206ENST00000470606 RASA1P20936 1047 aa9.79□□□□□ -0.84
GTF3A-206ENST00000470606 ADD1P35611 737 aaKnown RBP9.79□□□□□ -0.84
GTF3A-206ENST00000470606 DDX11Q96FC9 970 aa9.79□□□□□ -0.84
GTF3A-206ENST00000470606 OSBPL5Q9H0X9 879 aaPredicted RBP9.79□□□□□ -0.84
GTF3A-206ENST00000470606 NAP1L2Q9ULW6 460 aaPredicted RBP9.79□□□□□ -0.84
GTF3A-206ENST00000470606 DDTLA6NHG4 134 aaPredicted RBP9.78□□□□□ -0.84
GTF3A-206ENST00000470606 POLR3DP05423 398 aaPredicted RBP9.78□□□□□ -0.84
GTF3A-206ENST00000470606 PCP11498 1178 aaKnown RBP9.78□□□□□ -0.84
GTF3A-206ENST00000470606 CDK8P49336 464 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 RBM5P52756 815 aaKnown RBP eCLIP9.78□□□□□ -0.84
GTF3A-206ENST00000470606 TCP10Q12799 353 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 NTRK3Q16288 839 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 C16orf86Q6ZW13 317 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 MICU3Q86XE3 530 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 CCDC144CPQ8IYA2 1237 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 ZSCAN10Q96SZ4 725 aaPredicted RBP9.78□□□□□ -0.84
GTF3A-206ENST00000470606 IDI2Q9BXS1 227 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 DNAJC18Q9H819 358 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 MTMR6Q9Y217 621 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 ZNF541Q9H0D2 1346 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 PTPDC1A2A3K4 754 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 SPDYE2BA6NHP3 402 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 FZD9O00144 591 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 SPDYE6P0CI01 402 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 YBX3P16989 372 aaKnown RBP eCLIP9.78□□□□□ -0.843e-8■■□□□ 13.6
GTF3A-206ENST00000470606 NUCB2P80303 420 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 TFAP4Q01664 338 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 SHROOM1Q2M3G4 852 aaPredicted RBP9.78□□□□□ -0.84
GTF3A-206ENST00000470606 CLEC17AQ6ZS10 378 aa9.78□□□□□ -0.84
GTF3A-206ENST00000470606 ZBED3Q96IU2 234 aaPredicted RBP9.78□□□□□ -0.84
GTF3A-206ENST00000470606 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.78□□□□□ -0.84
GTF3A-206ENST00000470606 MYO3BQ8WXR4 1341 aa9.77□□□□□ -0.85
GTF3A-206ENST00000470606 GREB1LQ9C091 1923 aaPredicted RBP9.77□□□□□ -0.85
GTF3A-206ENST00000470606 FAM196BA6NMK8 535 aa9.77□□□□□ -0.85
GTF3A-206ENST00000470606 STX6O43752 255 aa9.77□□□□□ -0.85
GTF3A-206ENST00000470606 PDE4BQ07343 736 aa9.77□□□□□ -0.85
GTF3A-206ENST00000470606 WTAPQ15007 396 aa9.77□□□□□ -0.85
GTF3A-206ENST00000470606 CIAPIN1Q6FI81 312 aa9.77□□□□□ -0.85
GTF3A-206ENST00000470606 CDC37L1Q7L3B6 337 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms