RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 EN2P19622 333 aaPredicted RBP11.28□□□□□ -0.6
SHROOM3-203ENST00000469923 PLCD1P51178 756 aa11.28□□□□□ -0.6
SHROOM3-203ENST00000469923 SPP2Q13103 211 aa11.28□□□□□ -0.6
SHROOM3-203ENST00000469923 NOM1Q5C9Z4 860 aaKnown RBP11.28□□□□□ -0.6
SHROOM3-203ENST00000469923 FBXO46Q6PJ61 603 aaPredicted RBP11.28□□□□□ -0.6
SHROOM3-203ENST00000469923 GADL1Q6ZQY3 521 aa11.28□□□□□ -0.6
SHROOM3-203ENST00000469923 SCYL3Q8IZE3 742 aa11.28□□□□□ -0.6
SHROOM3-203ENST00000469923 SH3TC2Q8TF17 1288 aa11.28□□□□□ -0.6
SHROOM3-203ENST00000469923 ZNF512BQ96KM6 892 aaPredicted RBP11.28□□□□□ -0.6
SHROOM3-203ENST00000469923 TRIM47Q96LD4 638 aa11.28□□□□□ -0.6
SHROOM3-203ENST00000469923 EFCC1Q9HA90 598 aa11.28□□□□□ -0.6
SHROOM3-203ENST00000469923 ZFYVE28Q9HCC9 887 aa11.28□□□□□ -0.6
SHROOM3-203ENST00000469923 GABRQQ9UN88 632 aa11.28□□□□□ -0.6
SHROOM3-203ENST00000469923 ADGRA2Q96PE1 1338 aa11.28□□□□□ -0.6
SHROOM3-203ENST00000469923 RPAP1Q9BWH6 1393 aaPredicted RBP11.28□□□□□ -0.6
SHROOM3-203ENST00000469923 CYP2D7A0A087X1C5 515 aa11.27□□□□□ -0.61
SHROOM3-203ENST00000469923 TCRBV5S4A2TA0A5A2 114 aa11.27□□□□□ -0.61
SHROOM3-203ENST00000469923 MLLT1Q03111 559 aaPredicted RBP11.27□□□□□ -0.61
SHROOM3-203ENST00000469923 RPAP2Q8IXW5 612 aaPredicted RBP11.27□□□□□ -0.61
SHROOM3-203ENST00000469923 DNAJC2Q99543 621 aaKnown RBP11.27□□□□□ -0.61
SHROOM3-203ENST00000469923 PCDH10Q9P2E7 1040 aa11.27□□□□□ -0.61
SHROOM3-203ENST00000469923 FLT1P17948 1338 aa11.27□□□□□ -0.61
SHROOM3-203ENST00000469923 A0A0G2JLL6 359 aaPredicted RBP11.26□□□□□ -0.61
SHROOM3-203ENST00000469923 CXCL11O14625 94 aa11.26□□□□□ -0.61
SHROOM3-203ENST00000469923 CTNND1O60716 968 aaKnown RBP11.26□□□□□ -0.61
SHROOM3-203ENST00000469923 MAP4K4O95819 1239 aaPredicted RBP11.26□□□□□ -0.61
SHROOM3-203ENST00000469923 PDE6AP16499 860 aa11.26□□□□□ -0.61
SHROOM3-203ENST00000469923 GSTO1P78417 241 aa11.26□□□□□ -0.61
SHROOM3-203ENST00000469923 OTUD7BQ6GQQ9 843 aa11.26□□□□□ -0.61
SHROOM3-203ENST00000469923 PRRT2Q7Z6L0 340 aaPredicted RBP11.26□□□□□ -0.61
SHROOM3-203ENST00000469923 ANKRD23Q86SG2 305 aa11.26□□□□□ -0.61
SHROOM3-203ENST00000469923 CRBNQ96SW2 442 aa11.26□□□□□ -0.61
SHROOM3-203ENST00000469923 RIOK1Q9BRS2 568 aaKnown RBP11.26□□□□□ -0.61
SHROOM3-203ENST00000469923 DDX19BQ9UMR2 479 aa11.26□□□□□ -0.61
SHROOM3-203ENST00000469923 TBC1D12O60347 775 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 SLC34A2O95436 690 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 BCRP11274 1271 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 CAP2P40123 477 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 PSMC4P43686 418 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 HMGCS2P54868 508 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 LACTBP83111 547 aaPredicted RBP11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 MTFR1Q15390 333 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 SLC9C2Q5TAH2 1124 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 SLF2Q8IX21 1173 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 LCORLQ8N3X6 602 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 SLC44A5Q8NCS7 719 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 ACER1Q8TDN7 264 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 SDR42E1Q8WUS8 393 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 DYNLL2Q96FJ2 89 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 ARMT1Q9H993 441 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 PICK1Q9NRD5 415 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 ZNF532Q9HCE3 1301 aa11.25□□□□□ -0.61
SHROOM3-203ENST00000469923 SIPA1L1O43166 1804 aa11.24□□□□□ -0.61
SHROOM3-203ENST00000469923 NPM3O75607 178 aaKnown RBP11.24□□□□□ -0.61
SHROOM3-203ENST00000469923 IFIT2P09913 472 aaKnown RBP11.24□□□□□ -0.61
SHROOM3-203ENST00000469923 OSBPP22059 807 aa11.24□□□□□ -0.61
SHROOM3-203ENST00000469923 GUCY1A2P33402 732 aa11.24□□□□□ -0.61
SHROOM3-203ENST00000469923 PDE3AQ14432 1141 aa11.24□□□□□ -0.61
SHROOM3-203ENST00000469923 KIAA1755Q5JYT7 1200 aa11.24□□□□□ -0.61
SHROOM3-203ENST00000469923 METTL16Q86W50 562 aaKnown RBP11.24□□□□□ -0.61
SHROOM3-203ENST00000469923 KIF1BPQ96EK5 621 aa11.24□□□□□ -0.61
SHROOM3-203ENST00000469923 ERO1AQ96HE7 468 aa11.24□□□□□ -0.61
SHROOM3-203ENST00000469923 P2RX7Q99572 595 aaKnown RBP11.24□□□□□ -0.61
SHROOM3-203ENST00000469923 CEP290O15078 2479 aa11.23□□□□□ -0.61
SHROOM3-203ENST00000469923 SHMT1P34896 483 aa11.23□□□□□ -0.61
SHROOM3-203ENST00000469923 PKN2Q16513 984 aaKnown RBP11.23□□□□□ -0.61
SHROOM3-203ENST00000469923 Q3C1V9 767 aa11.23□□□□□ -0.61
SHROOM3-203ENST00000469923 ERC1Q8IUD2 1116 aa11.23□□□□□ -0.61
SHROOM3-203ENST00000469923 CLEC10AQ8IUN9 316 aa11.23□□□□□ -0.61
SHROOM3-203ENST00000469923 CLASRPQ8N2M8 674 aaKnown RBP11.23□□□□□ -0.61
SHROOM3-203ENST00000469923 HOOK2Q96ED9 719 aa11.23□□□□□ -0.61
SHROOM3-203ENST00000469923 DCTPP1Q9H773 170 aa11.23□□□□□ -0.61
SHROOM3-203ENST00000469923 EMILIN3Q9NT22 766 aa11.23□□□□□ -0.61
SHROOM3-203ENST00000469923 PI4KBQ9UBF8 816 aa11.23□□□□□ -0.61
SHROOM3-203ENST00000469923 DOCK3Q8IZD9 2030 aa11.23□□□□□ -0.61
SHROOM3-203ENST00000469923 MAGEB6P1A0A0J9YX57 407 aa11.22□□□□□ -0.61
SHROOM3-203ENST00000469923 FMNL1O95466 1100 aaPredicted RBP11.22□□□□□ -0.61
SHROOM3-203ENST00000469923 BAG3O95817 575 aa11.22□□□□□ -0.61
SHROOM3-203ENST00000469923 GH2P01242 217 aa11.22□□□□□ -0.61
SHROOM3-203ENST00000469923 USP5P45974 858 aa11.22□□□□□ -0.61
SHROOM3-203ENST00000469923 TRIM32Q13049 653 aa11.22□□□□□ -0.61
SHROOM3-203ENST00000469923 MTMR2Q13614 643 aa11.22□□□□□ -0.61
SHROOM3-203ENST00000469923 ZYXQ15942 572 aaKnown RBP11.22□□□□□ -0.61
SHROOM3-203ENST00000469923 SIAH1Q8IUQ4 282 aa11.22□□□□□ -0.61
SHROOM3-203ENST00000469923 STK11IPQ8N1F8 1099 aa11.22□□□□□ -0.61
SHROOM3-203ENST00000469923 ANKRD13CQ8N6S4 541 aa11.22□□□□□ -0.61
SHROOM3-203ENST00000469923 ZNF280CQ8ND82 737 aa11.22□□□□□ -0.61
SHROOM3-203ENST00000469923 PHIPQ8WWQ0 1821 aa11.22□□□□□ -0.61
SHROOM3-203ENST00000469923 PUS7LQ9H0K6 701 aaKnown RBP11.22□□□□□ -0.61
SHROOM3-203ENST00000469923 TXNRD2Q9NNW7 524 aa11.22□□□□□ -0.61
SHROOM3-203ENST00000469923 A0A1W2PRG0 241 aa11.21□□□□□ -0.61
SHROOM3-203ENST00000469923 USP17L5A8MUK1 530 aa11.21□□□□□ -0.61
SHROOM3-203ENST00000469923 RAB11FIP3O75154 756 aa11.21□□□□□ -0.61
SHROOM3-203ENST00000469923 MBD4O95243 580 aa11.21□□□□□ -0.61
SHROOM3-203ENST00000469923 MS4A1P11836 297 aa11.21□□□□□ -0.61
SHROOM3-203ENST00000469923 ELNP15502 786 aa11.21□□□□□ -0.61
SHROOM3-203ENST00000469923 ATP5JP18859 108 aa11.21□□□□□ -0.61
SHROOM3-203ENST00000469923 RRP1P56182 461 aaKnown RBP11.21□□□□□ -0.61
SHROOM3-203ENST00000469923 PRKCZQ05513 592 aa11.21□□□□□ -0.61
SHROOM3-203ENST00000469923 FOXP4Q8IVH2 680 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms