RNA–Protein interactions for RNA: ENST00000469882.5

FXR1-208, Transcript of FMR1 autosomal homolog 1, human

TSL 3

Gene FXR1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-208	ENST00000469882	CYP7A1	P22680	504 aa		13.74	□□□□□ -0.21
FXR1-208	ENST00000469882	RRP1B	Q14684	758 aa	Known RBP	13.74	□□□□□ -0.21
FXR1-208	ENST00000469882	ANKRD23	Q86SG2	305 aa		13.74	□□□□□ -0.21
FXR1-208	ENST00000469882	MAGEB6	Q8N7X4	407 aa		13.74	□□□□□ -0.21
FXR1-208	ENST00000469882	MIGA1	Q8NAN2	632 aa		13.74	□□□□□ -0.21
FXR1-208	ENST00000469882	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
FXR1-208	ENST00000469882	AFG3L2	Q9Y4W6	797 aa		13.74	□□□□□ -0.21
FXR1-208	ENST00000469882	ZHX2	Q9Y6X8	837 aa		13.74	□□□□□ -0.21
FXR1-208	ENST00000469882	LOC285556	D6RIA3	1793 aa		13.73	□□□□□ -0.21
FXR1-208	ENST00000469882	MYH1	P12882	1939 aa		13.73	□□□□□ -0.21
FXR1-208	ENST00000469882		A0A0G2JLL6	359 aa	Predicted RBP	13.73	□□□□□ -0.21
FXR1-208	ENST00000469882	PDHX	O00330	501 aa		13.73	□□□□□ -0.21
FXR1-208	ENST00000469882	CXCL11	O14625	94 aa		13.73	□□□□□ -0.21
FXR1-208	ENST00000469882	TLR2	O60603	784 aa		13.73	□□□□□ -0.21
FXR1-208	ENST00000469882	IFIT2	P09913	472 aa	Known RBP	13.73	□□□□□ -0.21
FXR1-208	ENST00000469882	GPAT2	Q6NUI2	795 aa		13.73	□□□□□ -0.21
FXR1-208	ENST00000469882	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.73	□□□□□ -0.21
FXR1-208	ENST00000469882	ARHGAP39	Q9C0H5	1083 aa		13.73	□□□□□ -0.21
FXR1-208	ENST00000469882	DNAJC18	Q9H819	358 aa		13.73	□□□□□ -0.21
FXR1-208	ENST00000469882	EFCC1	Q9HA90	598 aa		13.73	□□□□□ -0.21
FXR1-208	ENST00000469882	TRIM75P	A6NK02	468 aa		13.72	□□□□□ -0.21
FXR1-208	ENST00000469882	DNAJC2	Q99543	621 aa	Known RBP	13.72	□□□□□ -0.21
FXR1-208	ENST00000469882	SAP30BP	Q9UHR5	308 aa	Known RBP	13.72	□□□□□ -0.21
FXR1-208	ENST00000469882	PTPN22	Q9Y2R2	807 aa		13.72	□□□□□ -0.21
FXR1-208	ENST00000469882	NAV1	Q8NEY1	1877 aa		13.72	□□□□□ -0.21
FXR1-208	ENST00000469882	GOLIM4	O00461	696 aa		13.71	□□□□□ -0.21
FXR1-208	ENST00000469882	PDE6A	P16499	860 aa		13.71	□□□□□ -0.21
FXR1-208	ENST00000469882	LACTB	P83111	547 aa	Predicted RBP	13.71	□□□□□ -0.21
FXR1-208	ENST00000469882	MLLT1	Q03111	559 aa	Predicted RBP	13.71	□□□□□ -0.21
FXR1-208	ENST00000469882	MAP3K12	Q12852	859 aa		13.71	□□□□□ -0.21
FXR1-208	ENST00000469882	SLC4A8	Q2Y0W8	1093 aa		13.71	□□□□□ -0.21
FXR1-208	ENST00000469882	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
FXR1-208	ENST00000469882	EDC3	Q96F86	508 aa	Known RBP	13.71	□□□□□ -0.21
FXR1-208	ENST00000469882	DHX36	Q9H2U1	1008 aa	Known RBP	13.71	□□□□□ -0.21
FXR1-208	ENST00000469882	PI4KB	Q9UBF8	816 aa		13.71	□□□□□ -0.21
FXR1-208	ENST00000469882	CPA4	Q9UI42	421 aa		13.71	□□□□□ -0.21
FXR1-208	ENST00000469882	HERC5	Q9UII4	1024 aa	Known RBP	13.71	□□□□□ -0.21
FXR1-208	ENST00000469882	PALD1	Q9ULE6	856 aa		13.71	□□□□□ -0.21
FXR1-208	ENST00000469882	SMARCA5	O60264	1052 aa	Predicted RBP	13.7	□□□□□ -0.22
FXR1-208	ENST00000469882	CYP2C8	P10632	490 aa		13.7	□□□□□ -0.22
FXR1-208	ENST00000469882	CAP2	P40123	477 aa		13.7	□□□□□ -0.22
FXR1-208	ENST00000469882	JAG1	P78504	1218 aa		13.7	□□□□□ -0.22
FXR1-208	ENST00000469882	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.7	□□□□□ -0.22
FXR1-208	ENST00000469882	C17orf99	Q6UX52	265 aa		13.7	□□□□□ -0.22
FXR1-208	ENST00000469882	GADL1	Q6ZQY3	521 aa		13.7	□□□□□ -0.22
FXR1-208	ENST00000469882	METTL16	Q86W50	562 aa	Known RBP	13.7	□□□□□ -0.22
FXR1-208	ENST00000469882	PARK7	Q99497	189 aa	Known RBP	13.7	□□□□□ -0.22
FXR1-208	ENST00000469882	RIOK1	Q9BRS2	568 aa	Known RBP	13.7	□□□□□ -0.22
FXR1-208	ENST00000469882	MYH7	P12883	1935 aa		13.69	□□□□□ -0.22
FXR1-208	ENST00000469882	TCRBV5S4A2T	A0A5A2	114 aa		13.69	□□□□□ -0.22
FXR1-208	ENST00000469882	ECM2	O94769	699 aa	Predicted RBP	13.69	□□□□□ -0.22
FXR1-208	ENST00000469882	CTGF	P29279	349 aa		13.69	□□□□□ -0.22
FXR1-208	ENST00000469882	RRP1	P56182	461 aa	Known RBP	13.69	□□□□□ -0.22
FXR1-208	ENST00000469882	TTF1	Q15361	905 aa	Predicted RBP	13.69	□□□□□ -0.22
FXR1-208	ENST00000469882	SLC9C2	Q5TAH2	1124 aa		13.69	□□□□□ -0.22
FXR1-208	ENST00000469882	FASTKD5	Q7L8L6	764 aa	Known RBP	13.69	□□□□□ -0.22
FXR1-208	ENST00000469882	YTHDC1	Q96MU7	727 aa	Known RBP	13.69	□□□□□ -0.22
FXR1-208	ENST00000469882	LRRCC1	Q9C099	1032 aa		13.69	□□□□□ -0.22
FXR1-208	ENST00000469882	PTCH2	Q9Y6C5	1203 aa		13.69	□□□□□ -0.22
FXR1-208	ENST00000469882	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.68	□□□□□ -0.22
FXR1-208	ENST00000469882	ZNF532	Q9HCE3	1301 aa		13.68	□□□□□ -0.22
FXR1-208	ENST00000469882	ATP5J	P18859	108 aa		13.68	□□□□□ -0.22
FXR1-208	ENST00000469882	USP5	P45974	858 aa		13.68	□□□□□ -0.22
FXR1-208	ENST00000469882	TREML2	Q5T2D2	321 aa		13.68	□□□□□ -0.22
FXR1-208	ENST00000469882	TMED8	Q6PL24	325 aa	Predicted RBP	13.68	□□□□□ -0.22
FXR1-208	ENST00000469882	CERS3	Q8IU89	383 aa		13.68	□□□□□ -0.22
FXR1-208	ENST00000469882	BOLA2	Q9H3K6	86 aa		13.68	□□□□□ -0.22
FXR1-208	ENST00000469882	PAG1	Q9NWQ8	432 aa		13.68	□□□□□ -0.22
FXR1-208	ENST00000469882	MGAM	O43451	1857 aa		13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	MAGEB6P1	A0A0J9YX57	407 aa		13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	USP17L5	A8MUK1	530 aa		13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	GDF11	O95390	407 aa		13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	HLA-DOA	P06340	250 aa		13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	BCR	P11274	1271 aa		13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	SPP2	Q13103	211 aa		13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	SLFNL1	Q499Z3	407 aa		13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	ZNF280C	Q8ND82	737 aa		13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	ARMC5	Q96C12	935 aa		13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	TRIM47	Q96LD4	638 aa		13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	HAUS7	Q99871	368 aa		13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	TRIM34	Q9BYJ4	488 aa		13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	AGTPBP1	Q9UPW5	1226 aa		13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	SLC45A1	Q9Y2W3	748 aa		13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	PCDHB15	Q9Y5E8	787 aa		13.67	□□□□□ -0.22
FXR1-208	ENST00000469882	CHGB	P05060	677 aa		13.66	□□□□□ -0.22
FXR1-208	ENST00000469882	HMGCS2	P54868	508 aa		13.66	□□□□□ -0.22
FXR1-208	ENST00000469882	EVX2	Q03828	476 aa		13.66	□□□□□ -0.22
FXR1-208	ENST00000469882	KIF22	Q14807	665 aa		13.66	□□□□□ -0.22
FXR1-208	ENST00000469882	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.66	□□□□□ -0.22
FXR1-208	ENST00000469882	LCORL	Q8N3X6	602 aa		13.66	□□□□□ -0.22
FXR1-208	ENST00000469882	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.66	□□□□□ -0.22
FXR1-208	ENST00000469882	DCTPP1	Q9H773	170 aa		13.66	□□□□□ -0.22
FXR1-208	ENST00000469882	ZBTB21	Q9ULJ3	1066 aa		13.66	□□□□□ -0.22
FXR1-208	ENST00000469882	ASNS	P08243	561 aa		13.65	□□□□□ -0.22
FXR1-208	ENST00000469882	PSMC4	P43686	418 aa		13.65	□□□□□ -0.22
FXR1-208	ENST00000469882	MTMR2	Q13614	643 aa		13.65	□□□□□ -0.22
FXR1-208	ENST00000469882	ARHGEF6	Q15052	776 aa		13.65	□□□□□ -0.22
FXR1-208	ENST00000469882	TSHZ3	Q63HK5	1081 aa		13.65	□□□□□ -0.22
FXR1-208	ENST00000469882	TBC1D2	Q9BYX2	928 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms