RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 EXOSC10Q01780 885 aaKnown RBP12.32□□□□□ -0.44
THBS3-206ENST00000469769 EVX2Q03828 476 aa12.32□□□□□ -0.44
THBS3-206ENST00000469769 TNFAIP1Q13829 316 aa12.32□□□□□ -0.44
THBS3-206ENST00000469769 COL9A3Q14050 684 aaPredicted RBP12.32□□□□□ -0.44
THBS3-206ENST00000469769 C16orf86Q6ZW13 317 aa12.32□□□□□ -0.44
THBS3-206ENST00000469769 FOXP4Q8IVH2 680 aaPredicted RBP12.32□□□□□ -0.44
THBS3-206ENST00000469769 MB21D2Q8IYB1 491 aaPredicted RBP12.32□□□□□ -0.44
THBS3-206ENST00000469769 TTC14Q96N46 770 aa12.32□□□□□ -0.44
THBS3-206ENST00000469769 MTA3Q9BTC8 594 aa12.32□□□□□ -0.44
THBS3-206ENST00000469769 AGXT2Q9BYV1 514 aa12.32□□□□□ -0.44
THBS3-206ENST00000469769 TAF1DQ9H5J8 278 aaPredicted RBP12.32□□□□□ -0.44
THBS3-206ENST00000469769 PI4KBQ9UBF8 816 aa12.32□□□□□ -0.44
THBS3-206ENST00000469769 MINDY4BA8MYZ0 360 aa12.31□□□□□ -0.44
THBS3-206ENST00000469769 TBC1D12O60347 775 aa12.31□□□□□ -0.44
THBS3-206ENST00000469769 EPHX2P34913 555 aa12.31□□□□□ -0.44
THBS3-206ENST00000469769 CTDSPL2Q05D32 466 aa12.31□□□□□ -0.44
THBS3-206ENST00000469769 PICALMQ13492 652 aa12.31□□□□□ -0.44
THBS3-206ENST00000469769 MFSD6Q6ZSS7 791 aa12.31□□□□□ -0.44
THBS3-206ENST00000469769 RUFY3Q7L099 469 aa12.31□□□□□ -0.44
THBS3-206ENST00000469769 DHX32Q7L7V1 743 aaKnown RBP12.31□□□□□ -0.44
THBS3-206ENST00000469769 APOBEC3FQ8IUX4 373 aaKnown RBP12.31□□□□□ -0.44
THBS3-206ENST00000469769 AMOTL1Q8IY63 956 aa12.31□□□□□ -0.44
THBS3-206ENST00000469769 NCOA7Q8NI08 942 aa12.31□□□□□ -0.44
THBS3-206ENST00000469769 NKX2-3Q8TAU0 364 aa12.31□□□□□ -0.44
THBS3-206ENST00000469769 SNX21Q969T3 373 aa12.31□□□□□ -0.44
THBS3-206ENST00000469769 JAKMIP1Q96N16 626 aaKnown RBP12.31□□□□□ -0.44
THBS3-206ENST00000469769 TEPSINQ96N21 525 aa12.31□□□□□ -0.44
THBS3-206ENST00000469769 CNNM2Q9H8M5 875 aa12.31□□□□□ -0.44
THBS3-206ENST00000469769 PPP2R3BQ9Y5P8 575 aa12.31□□□□□ -0.44
THBS3-206ENST00000469769 ASTN2O75129 1339 aaPredicted RBP12.31□□□□□ -0.44
THBS3-206ENST00000469769 POLR3DP05423 398 aaPredicted RBP12.3□□□□□ -0.44
THBS3-206ENST00000469769 SLC3A2P08195 630 aaKnown RBP12.3□□□□□ -0.44
THBS3-206ENST00000469769 RPS6KB1P23443 525 aa12.3□□□□□ -0.44
THBS3-206ENST00000469769 TNNI2P48788 182 aa12.3□□□□□ -0.44
THBS3-206ENST00000469769 TCP10Q12799 353 aa12.3□□□□□ -0.44
THBS3-206ENST00000469769 RASA3Q14644 834 aa12.3□□□□□ -0.44
THBS3-206ENST00000469769 RBM26Q5T8P6 1007 aaKnown RBP12.3□□□□□ -0.44
THBS3-206ENST00000469769 BLOC1S2Q6QNY1 142 aa12.3□□□□□ -0.44
THBS3-206ENST00000469769 KRT23Q9C075 422 aa12.3□□□□□ -0.44
THBS3-206ENST00000469769 SWAP70Q9UH65 585 aa12.3□□□□□ -0.44
THBS3-206ENST00000469769 SAP30BPQ9UHR5 308 aaKnown RBP12.3□□□□□ -0.44
THBS3-206ENST00000469769 SERPINB13Q9UIV8 391 aa12.3□□□□□ -0.44
THBS3-206ENST00000469769 NEDD4P46934 1319 aa12.3□□□□□ -0.44
THBS3-206ENST00000469769 TCP10L2B9ZVM9 353 aa12.29□□□□□ -0.44
THBS3-206ENST00000469769 HLA-DOAP06340 250 aa12.29□□□□□ -0.44
THBS3-206ENST00000469769 CASTP20810 708 aaKnown RBP12.29□□□□□ -0.44
THBS3-206ENST00000469769 NOVP48745 357 aa12.29□□□□□ -0.44
THBS3-206ENST00000469769 CDK8P49336 464 aa12.29□□□□□ -0.44
THBS3-206ENST00000469769 PDE4BQ07343 736 aa12.29□□□□□ -0.44
THBS3-206ENST00000469769 ANGEL2Q5VTE6 544 aaKnown RBP12.29□□□□□ -0.44
THBS3-206ENST00000469769 TATDN1Q6P1N9 297 aa12.29□□□□□ -0.44
THBS3-206ENST00000469769 PNMA8AQ86V59 439 aaPredicted RBP12.29□□□□□ -0.44
THBS3-206ENST00000469769 DEFB129Q9H1M3 183 aa12.29□□□□□ -0.44
THBS3-206ENST00000469769 DNAJC18Q9H819 358 aa12.29□□□□□ -0.44
THBS3-206ENST00000469769 ZNF287Q9HBT7 754 aa12.29□□□□□ -0.44
THBS3-206ENST00000469769 INCENPQ9NQS7 918 aa12.29□□□□□ -0.44
THBS3-206ENST00000469769 TCP11L1Q9NUJ3 509 aa12.29□□□□□ -0.44
THBS3-206ENST00000469769 ZSWIM5Q9P217 1185 aa12.29□□□□□ -0.44
THBS3-206ENST00000469769 HERC5Q9UII4 1024 aaKnown RBP12.29□□□□□ -0.44
THBS3-206ENST00000469769 CYP46A1Q9Y6A2 500 aa12.29□□□□□ -0.44
THBS3-206ENST00000469769 GREB1LQ9C091 1923 aaPredicted RBP12.29□□□□□ -0.44
THBS3-206ENST00000469769 VEGFAP15692 232 aaPredicted RBP12.28□□□□□ -0.44
THBS3-206ENST00000469769 RASA1P20936 1047 aa12.28□□□□□ -0.44
THBS3-206ENST00000469769 MCM5P33992 734 aa12.28□□□□□ -0.44
THBS3-206ENST00000469769 SHMT1P34896 483 aa12.28□□□□□ -0.44
THBS3-206ENST00000469769 NEK4P51957 841 aa12.28□□□□□ -0.44
THBS3-206ENST00000469769 EVCP57679 992 aa12.28□□□□□ -0.44
THBS3-206ENST00000469769 ANTXR2P58335 489 aa12.28□□□□□ -0.44
THBS3-206ENST00000469769 TRDNQ13061 729 aa12.28□□□□□ -0.44
THBS3-206ENST00000469769 ESR2Q92731 530 aa12.28□□□□□ -0.44
THBS3-206ENST00000469769 DYNLL2Q96FJ2 89 aa12.28□□□□□ -0.44
THBS3-206ENST00000469769 UPF3BQ9BZI7 483 aaKnown RBP12.28□□□□□ -0.44
THBS3-206ENST00000469769 TMEM39BQ9GZU3 492 aa12.28□□□□□ -0.44
THBS3-206ENST00000469769 VEZTQ9HBM0 779 aa12.28□□□□□ -0.44
THBS3-206ENST00000469769 GGA3Q9NZ52 723 aa12.28□□□□□ -0.44
THBS3-206ENST00000469769 MYH8P13535 1937 aa12.28□□□□□ -0.44
THBS3-206ENST00000469769 PLIN4Q96Q06 1357 aa12.28□□□□□ -0.44
THBS3-206ENST00000469769 B4E1Z4 1266 aa12.27□□□□□ -0.45
THBS3-206ENST00000469769 MCM2P49736 904 aa12.27□□□□□ -0.45
THBS3-206ENST00000469769 CYB5R4Q7L1T6 521 aa12.27□□□□□ -0.45
THBS3-206ENST00000469769 RALYLQ86SE5 291 aaKnown RBP12.27□□□□□ -0.45
THBS3-206ENST00000469769 SLC44A5Q8NCS7 719 aa12.27□□□□□ -0.45
THBS3-206ENST00000469769 IGDCC4Q8TDY8 1250 aa12.27□□□□□ -0.45
THBS3-206ENST00000469769 ANKS1AQ92625 1134 aa12.27□□□□□ -0.45
THBS3-206ENST00000469769 TMEM87BQ96K49 555 aa12.27□□□□□ -0.45
THBS3-206ENST00000469769 CCDC17Q96LX7 622 aa12.27□□□□□ -0.45
THBS3-206ENST00000469769 CSRNP1Q96S65 589 aa12.27□□□□□ -0.45
THBS3-206ENST00000469769 IGKV6D-41A0A0C4DH26 115 aa12.26□□□□□ -0.45
THBS3-206ENST00000469769 ST18O60284 1047 aa12.26□□□□□ -0.45
THBS3-206ENST00000469769 KDM4AO75164 1064 aa12.26□□□□□ -0.45
THBS3-206ENST00000469769 CD2BP2O95400 341 aaKnown RBP12.26□□□□□ -0.45
THBS3-206ENST00000469769 CPA1P15085 419 aa12.26□□□□□ -0.45
THBS3-206ENST00000469769 HSPA6P17066 643 aa12.26□□□□□ -0.45
THBS3-206ENST00000469769 TOB2Q14106 344 aaPredicted RBP12.26□□□□□ -0.45
THBS3-206ENST00000469769 SEC23AQ15436 765 aa12.26□□□□□ -0.45
THBS3-206ENST00000469769 CDAN1Q8IWY9 1227 aa12.26□□□□□ -0.45
THBS3-206ENST00000469769 NEDD1Q8NHV4 660 aa12.26□□□□□ -0.45
THBS3-206ENST00000469769 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.26□□□□□ -0.45
THBS3-206ENST00000469769 PDRG1Q9NUG6 133 aa12.26□□□□□ -0.45
THBS3-206ENST00000469769 PHF20L1A8MW92 1017 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms