RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 MAPKAPK5Q8IW41 473 aa21.27■■□□□ 1
MRPL28-208ENST00000469744 SCYL3Q8IZE3 742 aa21.27■■□□□ 1
MRPL28-208ENST00000469744 MAGEB6Q8N7X4 407 aa21.27■■□□□ 1
MRPL28-208ENST00000469744 CD99L2Q8TCZ2 262 aa21.27■■□□□ 1
MRPL28-208ENST00000469744 TGFBRAP1Q8WUH2 860 aa21.27■■□□□ 1
MRPL28-208ENST00000469744 LNPKQ9C0E8 428 aa21.27■■□□□ 1
MRPL28-208ENST00000469744 COL2A1P02458 1487 aaPredicted RBP21.27■□□□□ 0.99
MRPL28-208ENST00000469744 RAB11FIP3O75154 756 aa21.26■□□□□ 0.99
MRPL28-208ENST00000469744 BMP2KLQ5H9B9 411 aa21.26■□□□□ 0.99
MRPL28-208ENST00000469744 CCDC84Q86UT8 332 aaPredicted RBP21.26■□□□□ 0.99
MRPL28-208ENST00000469744 MIGA1Q8NAN2 632 aa21.26■□□□□ 0.99
MRPL28-208ENST00000469744 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.26■□□□□ 0.99
MRPL28-208ENST00000469744 ZFYVE28Q9HCC9 887 aa21.26■□□□□ 0.99
MRPL28-208ENST00000469744 PICK1Q9NRD5 415 aa21.26■□□□□ 0.99
MRPL28-208ENST00000469744 HPS5Q9UPZ3 1129 aa21.26■□□□□ 0.99
MRPL28-208ENST00000469744 KCNH4Q9UQ05 1017 aa21.26■□□□□ 0.99
MRPL28-208ENST00000469744 PHIPQ8WWQ0 1821 aa21.26■□□□□ 0.99
MRPL28-208ENST00000469744 ATAD5Q96QE3 1844 aa21.26■□□□□ 0.99
MRPL28-208ENST00000469744 PLCG2P16885 1265 aa21.26■□□□□ 0.99
MRPL28-208ENST00000469744 PPP4CP60510 307 aa21.26■□□□□ 0.99
MRPL28-208ENST00000469744 CAP1Q01518 475 aa21.26■□□□□ 0.99
MRPL28-208ENST00000469744 TRIM17Q9Y577 477 aa21.26■□□□□ 0.99
MRPL28-208ENST00000469744 ZHX2Q9Y6X8 837 aa21.26■□□□□ 0.99
MRPL28-208ENST00000469744 PTPRFP10586 1907 aa21.25■□□□□ 0.99
MRPL28-208ENST00000469744 SEC24BO95487 1268 aa21.25■□□□□ 0.99
MRPL28-208ENST00000469744 PTPRAP18433 802 aa21.25■□□□□ 0.99
MRPL28-208ENST00000469744 PKN2Q16513 984 aaKnown RBP21.25■□□□□ 0.99
MRPL28-208ENST00000469744 DNAJC2Q99543 621 aaKnown RBP21.25■□□□□ 0.99
MRPL28-208ENST00000469744 ZSWIM8A7E2V4 1837 aa21.25■□□□□ 0.99
MRPL28-208ENST00000469744 FLT1P17948 1338 aa21.24■□□□□ 0.99
MRPL28-208ENST00000469744 SMARCA5O60264 1052 aaPredicted RBP21.24■□□□□ 0.99
MRPL28-208ENST00000469744 CTNND1O60716 968 aaKnown RBP21.24■□□□□ 0.99
MRPL28-208ENST00000469744 SP3Q02447 781 aa21.24■□□□□ 0.99
MRPL28-208ENST00000469744 MOGSQ13724 837 aa21.24■□□□□ 0.99
MRPL28-208ENST00000469744 SLC4A8Q2Y0W8 1093 aa21.24■□□□□ 0.99
MRPL28-208ENST00000469744 OTOP1Q7RTM1 612 aa21.24■□□□□ 0.99
MRPL28-208ENST00000469744 EDC3Q96F86 508 aaKnown RBP21.24■□□□□ 0.99
MRPL28-208ENST00000469744 ERO1AQ96HE7 468 aa21.24■□□□□ 0.99
MRPL28-208ENST00000469744 SAP30BPQ9UHR5 308 aaKnown RBP21.24■□□□□ 0.99
MRPL28-208ENST00000469744 TBC1D12O60347 775 aa21.23■□□□□ 0.99
MRPL28-208ENST00000469744 EIF5BO60841 1220 aaKnown RBP21.23■□□□□ 0.99
MRPL28-208ENST00000469744 MAP3K12Q12852 859 aa21.23■□□□□ 0.99
MRPL28-208ENST00000469744 FBXO46Q6PJ61 603 aaPredicted RBP21.23■□□□□ 0.99
MRPL28-208ENST00000469744 TBC1D32Q96NH3 1257 aa21.23■□□□□ 0.99
MRPL28-208ENST00000469744 MYH1P12882 1939 aa21.22■□□□□ 0.99
MRPL28-208ENST00000469744 PDHXO00330 501 aa21.22■□□□□ 0.99
MRPL28-208ENST00000469744 GOLIM4O00461 696 aa21.22■□□□□ 0.99
MRPL28-208ENST00000469744 SOX10P56693 466 aa21.22■□□□□ 0.99
MRPL28-208ENST00000469744 RRP1BQ14684 758 aaKnown RBP21.22■□□□□ 0.99
MRPL28-208ENST00000469744 PALD1Q9ULE6 856 aa21.22■□□□□ 0.99
MRPL28-208ENST00000469744 TRIM75PA6NK02 468 aa21.21■□□□□ 0.99
MRPL28-208ENST00000469744 ANKRD23Q86SG2 305 aa21.21■□□□□ 0.99
MRPL28-208ENST00000469744 LRRCC1Q9C099 1032 aa21.21■□□□□ 0.99
MRPL28-208ENST00000469744 ZCCHC17Q9NP64 241 aaKnown RBP21.21■□□□□ 0.99
MRPL28-208ENST00000469744 AFG3L2Q9Y4W6 797 aa21.21■□□□□ 0.99
MRPL28-208ENST00000469744 CENPFP49454 3210 aa21.21■□□□□ 0.99
MRPL28-208ENST00000469744 CXCL11O14625 94 aa21.2■□□□□ 0.98
MRPL28-208ENST00000469744 TLR2O60603 784 aa21.2■□□□□ 0.98
MRPL28-208ENST00000469744 ECM2O94769 699 aaPredicted RBP21.2■□□□□ 0.98
MRPL28-208ENST00000469744 BOLA2Q9H3K6 86 aa21.2■□□□□ 0.98
MRPL28-208ENST00000469744 PI4KBQ9UBF8 816 aa21.2■□□□□ 0.98
MRPL28-208ENST00000469744 DAXXQ9UER7 740 aaPredicted RBP21.2■□□□□ 0.98
MRPL28-208ENST00000469744 IGSF3O75054 1194 aa21.2■□□□□ 0.98
MRPL28-208ENST00000469744 TTF1Q15361 905 aaPredicted RBP21.2■□□□□ 0.98
MRPL28-208ENST00000469744 GPAT2Q6NUI2 795 aa21.2■□□□□ 0.98
MRPL28-208ENST00000469744 GADL1Q6ZQY3 521 aa21.2■□□□□ 0.98
MRPL28-208ENST00000469744 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.2■□□□□ 0.98
MRPL28-208ENST00000469744 DHX36Q9H2U1 1008 aaKnown RBP21.2■□□□□ 0.98
MRPL28-208ENST00000469744 DNAJC18Q9H819 358 aa21.2■□□□□ 0.98
MRPL28-208ENST00000469744 EFCC1Q9HA90 598 aa21.2■□□□□ 0.98
MRPL28-208ENST00000469744 A0A0G2JLL6 359 aaPredicted RBP21.19■□□□□ 0.98
MRPL28-208ENST00000469744 PDE6AP16499 860 aa21.19■□□□□ 0.98
MRPL28-208ENST00000469744 SLC9C2Q5TAH2 1124 aa21.19■□□□□ 0.98
MRPL28-208ENST00000469744 PRRT2Q7Z6L0 340 aaPredicted RBP21.19■□□□□ 0.98
MRPL28-208ENST00000469744 ARHGAP39Q9C0H5 1083 aa21.19■□□□□ 0.98
MRPL28-208ENST00000469744 CPA4Q9UI42 421 aa21.19■□□□□ 0.98
MRPL28-208ENST00000469744 HERC5Q9UII4 1024 aaKnown RBP21.19■□□□□ 0.98
MRPL28-208ENST00000469744 CAP2P40123 477 aa21.18■□□□□ 0.98
MRPL28-208ENST00000469744 USP5P45974 858 aa21.18■□□□□ 0.98
MRPL28-208ENST00000469744 SHROOM1Q2M3G4 852 aaPredicted RBP21.18■□□□□ 0.98
MRPL28-208ENST00000469744 CRACR2BQ8N4Y2 399 aaPredicted RBP21.18■□□□□ 0.98
MRPL28-208ENST00000469744 CYP2C8P10632 490 aa21.17■□□□□ 0.98
MRPL28-208ENST00000469744 ATP5JP18859 108 aa21.17■□□□□ 0.98
MRPL28-208ENST00000469744 SLFNL1Q499Z3 407 aa21.17■□□□□ 0.98
MRPL28-208ENST00000469744 RIOK1Q9BRS2 568 aaKnown RBP21.17■□□□□ 0.98
MRPL28-208ENST00000469744 PAG1Q9NWQ8 432 aa21.17■□□□□ 0.98
MRPL28-208ENST00000469744 ZNF532Q9HCE3 1301 aa21.17■□□□□ 0.98
MRPL28-208ENST00000469744 NAV1Q8NEY1 1877 aa21.17■□□□□ 0.98
MRPL28-208ENST00000469744 MAGEB6P1A0A0J9YX57 407 aa21.16■□□□□ 0.98
MRPL28-208ENST00000469744 JAG1P78504 1218 aa21.16■□□□□ 0.98
MRPL28-208ENST00000469744 BECN1Q14457 450 aa21.16■□□□□ 0.98
MRPL28-208ENST00000469744 ADGRA2Q96PE1 1338 aa21.16■□□□□ 0.98
MRPL28-208ENST00000469744 TRIM34Q9BYJ4 488 aa21.16■□□□□ 0.98
MRPL28-208ENST00000469744 PTPN22Q9Y2R2 807 aa21.16■□□□□ 0.98
MRPL28-208ENST00000469744 MYH7P12883 1935 aa21.16■□□□□ 0.98
MRPL28-208ENST00000469744 DDX60LQ5H9U9 1706 aaKnown RBP21.15■□□□□ 0.98
MRPL28-208ENST00000469744 GDF11O95390 407 aa21.15■□□□□ 0.98
MRPL28-208ENST00000469744 RGS19P49795 217 aa21.15■□□□□ 0.98
MRPL28-208ENST00000469744 LACTBP83111 547 aaPredicted RBP21.15■□□□□ 0.98
MRPL28-208ENST00000469744 SPP2Q13103 211 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms