RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 GPATCH11Q8N954 259 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 TSEN2Q8NCE0 465 aaKnown RBP5.64□□□□□ -1.51
SF3B1-207ENST00000468925 RNF214Q8ND24 703 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 GIMAP7Q8NHV1 300 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 GIPC2Q8TF65 315 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 RUNDC1Q96C34 613 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 TRIM11Q96F44 468 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 SLC30A3Q99726 388 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 TUBB2BQ9BVA1 445 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 PLVAPQ9BX97 442 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 ZFP64Q9NPA5 681 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 IMPACTQ9P2X3 320 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 FHOD1Q9Y613 1164 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 ATXN2Q99700 1313 aaKnown RBP5.64□□□□□ -1.51
SF3B1-207ENST00000468925 ABCC11Q96J66 1382 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 ABCC5O15440 1437 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 SHANK2Q9UPX8 1470 aa5.64□□□□□ -1.51
SF3B1-207ENST00000468925 SCO2A0A1W2PP80 73 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 ANKRD18BA2A2Z9 1011 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 GOLGA6L9A6NEM1 432 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 EFCAB8A8MWE9 144 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 ZBTB7BO15156 539 aaPredicted RBP5.63□□□□□ -1.51
SF3B1-207ENST00000468925 EFSO43281 561 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 ATG7O95352 703 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 IPO7O95373 1038 aaKnown RBP5.63□□□□□ -1.51
SF3B1-207ENST00000468925 SETSIPP0DME0 302 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 DDR1Q08345 913 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 NEDD9Q14511 834 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 CRYMQ14894 314 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 SF3A1Q15459 793 aaKnown RBP5.63□□□□□ -1.51
SF3B1-207ENST00000468925 ALDH1L2Q3SY69 923 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 DNAJC21Q5F1R6 531 aaKnown RBP5.63□□□□□ -1.51
SF3B1-207ENST00000468925 FAM182BQ5T319 152 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 ARTNQ5T4W7 220 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 SARM1Q6SZW1 724 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 C8orf86Q6ZUL3 223 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 TRIM50Q86XT4 487 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 CCDC50Q8IVM0 306 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 NFATC2IPQ8NCF5 419 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.63□□□□□ -1.51
SF3B1-207ENST00000468925 CHMP7Q8WUX9 453 aaPredicted RBP5.63□□□□□ -1.51
SF3B1-207ENST00000468925 TCP11Q8WWU5 503 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 ARHGAP45Q92619 1136 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 ERCC4Q92889 916 aaPredicted RBP5.63□□□□□ -1.51
SF3B1-207ENST00000468925 NGLY1Q96IV0 654 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 CEP63Q96MT8 703 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 TEX13AQ9BXU3 409 aaPredicted RBP5.63□□□□□ -1.51
SF3B1-207ENST00000468925 PHACTR1Q9C0D0 580 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 GBP3Q9H0R5 595 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 NOP53Q9NZM5 478 aaKnown RBP5.63□□□□□ -1.51
SF3B1-207ENST00000468925 CLIP2Q9UDT6 1046 aa5.63□□□□□ -1.51
SF3B1-207ENST00000468925 URB2Q14146 1524 aaKnown RBP5.63□□□□□ -1.51
SF3B1-207ENST00000468925 ANKRD33BA6NCL7 494 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 PALM3A6NDB9 673 aaPredicted RBP5.62□□□□□ -1.51
SF3B1-207ENST00000468925 EML1O00423 815 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 APAF1O14727 1248 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 ERLIN1O75477 346 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 RDXP35241 583 aaKnown RBP5.62□□□□□ -1.51
SF3B1-207ENST00000468925 DOC2BQ14184 412 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 BRD3Q15059 726 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 NAALADL2Q58DX5 795 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 GIMAP6Q6P9H5 292 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 ATF7IPQ6VMQ6 1270 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 NOL8Q76FK4 1167 aaKnown RBP5.62□□□□□ -1.51
SF3B1-207ENST00000468925 ZNF280CQ8ND82 737 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 HNRNPLLQ8WVV9 542 aaKnown RBP5.62□□□□□ -1.51
SF3B1-207ENST00000468925 MRFAP1L1Q96HT8 127 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 FUCA2Q9BTY2 467 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 USP26Q9BXU7 913 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 KCNF1Q9H3M0 494 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 IGFLR1Q9H665 355 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 ARFGAP3Q9NP61 516 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 ZBTB40Q9NUA8 1239 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 ZNF446Q9NWS9 450 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 PPP1R1BQ9UD71 204 aaPredicted RBP5.62□□□□□ -1.51
SF3B1-207ENST00000468925 SPAG9O60271 1321 aaKnown RBP5.62□□□□□ -1.51
SF3B1-207ENST00000468925 PHLPP2Q6ZVD8 1323 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 SSH2Q76I76 1423 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 KIAA0586Q9BVV6 1533 aa5.62□□□□□ -1.51
SF3B1-207ENST00000468925 ELOA3CA0A087WX78 387 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-207ENST00000468925 A0A1B0GUA9 196 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 CCDC189A1A4V9 331 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 RTL1A6NKG5 1358 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 ELOA3DA6NLF2 546 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-207ENST00000468925 EIF3CLB5ME19 914 aaKnown RBP5.61□□□□□ -1.51
SF3B1-207ENST00000468925 PIK3R2O00459 728 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 ATP9BO43861 1147 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 PPP1R12BO60237 982 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-207ENST00000468925 LZTS3O60299 673 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-207ENST00000468925 PPFIA4O75335 1185 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 LMOD1P29536 600 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-207ENST00000468925 ATP1A2P50993 1020 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 PSMA6P60900 246 aaKnown RBP5.61□□□□□ -1.51
SF3B1-207ENST00000468925 TRAF1Q13077 416 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 SMC1AQ14683 1233 aaKnown RBP5.61□□□□□ -1.51
SF3B1-207ENST00000468925 PDCD2Q16342 344 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-207ENST00000468925 ELOA3BQ3SY89 546 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 SAMD5Q5TGI4 173 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 ZSCAN25Q6NSZ9 544 aa5.61□□□□□ -1.51
SF3B1-207ENST00000468925 TTC41PQ6P2S7 1318 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms