RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 NECTIN1Q15223 517 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 KCTD16Q68DU8 428 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 ZNF790Q6PG37 636 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 PIK3AP1Q6ZUJ8 805 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 PNMA8AQ86V59 439 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 SMYD4Q8IYR2 804 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 CSGALNACT2Q8N6G5 542 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 APPBP2Q92624 585 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 AIFM3Q96NN9 605 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 VPS54Q9P1Q0 977 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 DBNLQ9UJU6 430 aaKnown RBP11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 SAR1BQ9Y6B6 198 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 GCOM1H8Y6P7 765 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 MYZAPP0CAP1 466 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 MAP2K2P36507 400 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 CCDC25Q86WR0 208 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 KLHL7Q8IXQ5 586 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 ARFGAP2Q8N6H7 521 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 XAGE2Q96GT9 111 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 METTL22Q9BUU2 404 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 ARMT1Q9H993 441 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 PPANQ9NQ55 473 aaKnown RBP11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 ADAM21Q9UKJ8 722 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 WWC3Q9ULE0 1092 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 RIMBP3CA6NJZ7 1639 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 RIMBP3BA6NNM3 1639 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 RIMBP3Q9UFD9 1639 aa11.9□□□□□ -0.5
TRAPPC10-207ENST00000468864 MYOM1P52179 1685 aa11.9□□□□□ -0.51
TRAPPC10-207ENST00000468864 UQCRFS1P1P0C7P4 283 aa11.9□□□□□ -0.51
TRAPPC10-207ENST00000468864 KRT13P13646 458 aa11.9□□□□□ -0.51
TRAPPC10-207ENST00000468864 DDIT3P35638 169 aa11.9□□□□□ -0.51
TRAPPC10-207ENST00000468864 GUCY2FP51841 1108 aa11.9□□□□□ -0.51
TRAPPC10-207ENST00000468864 RESTQ13127 1097 aa11.9□□□□□ -0.51
TRAPPC10-207ENST00000468864 DTHD1Q6ZMT9 781 aa11.9□□□□□ -0.51
TRAPPC10-207ENST00000468864 UIMC1Q96RL1 719 aa11.9□□□□□ -0.51
TRAPPC10-207ENST00000468864 PYM1Q9BRP8 204 aaKnown RBP11.9□□□□□ -0.51
TRAPPC10-207ENST00000468864 A1BGP04217 495 aa11.89□□□□□ -0.51
TRAPPC10-207ENST00000468864 CDC23Q9UJX2 597 aa11.89□□□□□ -0.51
TRAPPC10-207ENST00000468864 SAMM50Q9Y512 469 aa11.89□□□□□ -0.51
TRAPPC10-207ENST00000468864 FGAP02671 866 aa11.89□□□□□ -0.51
TRAPPC10-207ENST00000468864 CASP14P31944 242 aa11.89□□□□□ -0.51
TRAPPC10-207ENST00000468864 MRPS25P82663 173 aaKnown RBP11.89□□□□□ -0.51
TRAPPC10-207ENST00000468864 PAK1Q13153 545 aa11.89□□□□□ -0.51
TRAPPC10-207ENST00000468864 B4GALNT4Q76KP1 1039 aa11.89□□□□□ -0.51
TRAPPC10-207ENST00000468864 SRGAP1Q7Z6B7 1085 aa11.89□□□□□ -0.51
TRAPPC10-207ENST00000468864 ZNF496Q96IT1 587 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC10-207ENST00000468864 CABS1Q96KC9 395 aa11.89□□□□□ -0.51
TRAPPC10-207ENST00000468864 CDC5LQ99459 802 aaKnown RBP11.89□□□□□ -0.51
TRAPPC10-207ENST00000468864 PRDM4Q9UKN5 801 aa11.89□□□□□ -0.51
TRAPPC10-207ENST00000468864 MAGEA1P43355 309 aa11.89□□□□□ -0.51
TRAPPC10-207ENST00000468864 ZNF526Q8TF50 670 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC10-207ENST00000468864 FAM207AQ9NSI2 230 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC10-207ENST00000468864 PRAMEF22A3QJZ6 481 aa11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 STX10O60499 249 aa11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 GCP02774 474 aa11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 CDC25BP30305 580 aa11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 PDE4BQ07343 736 aa11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 RAD51AP2Q09MP3 1159 aa11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 LINC00301Q8NCQ3 95 aa11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 ZNF274Q96GC6 653 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 SOWAHDA6NJG2 315 aa11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 VIMP08670 466 aaKnown RBP11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 IRX5P78411 483 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 SECISBP2LQ93073 1101 aaKnown RBP11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 SAMSN1Q9NSI8 373 aaKnown RBP11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 RTEL1Q9NZ71 1219 aa11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 EDC4Q6P2E9 1401 aaKnown RBP11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 RBM5P52756 815 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 PDE4DQ08499 809 aa11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 RAPGEF1Q13905 1077 aa11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 IL25Q9H293 177 aa11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 MORC2Q9Y6X9 1032 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC10-207ENST00000468864 E7EVH7 732 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 LETM2Q2VYF4 491 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 ACRBPQ8NEB7 543 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 SELENOOQ9BVL4 669 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 NLRC4Q9NPP4 1024 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 BAIAP2L1Q9UHR4 511 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 JRKLQ9Y4A0 524 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 NEURL1BA8MQ27 555 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 NAPAP54920 295 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 ZRSR2Q15696 482 aaKnown RBP11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 TYW1BQ6NUM6 668 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 CCDC155Q8N6L0 562 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 OR8K1Q8NGG5 319 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 FBF1Q8TES7 1133 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 NELFBQ8WX92 580 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 TTC14Q96N46 770 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 CCDC151A5D8V7 595 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 TMEM110-MUSTN1A8MSY1 372 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 TMEM232C9JQI7 657 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 GIGYF1O75420 1035 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 DEXIO95424 95 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 CLNS1AP54105 237 aaKnown RBP11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 PLA2G4DQ86XP0 818 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 ANKIB1Q9P2G1 1089 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 SERPINA10Q9UK55 444 aa11.87□□□□□ -0.51
TRAPPC10-207ENST00000468864 UGGT1Q9NYU2 1555 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms