RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 RGS3P49796 1198 aa14.01□□□□□ -0.17
NEDD9-207ENST00000468612 RTP1P59025 263 aa14.01□□□□□ -0.17
NEDD9-207ENST00000468612 PABPC4Q13310 644 aaKnown RBP eCLIP14.01□□□□□ -0.17
NEDD9-207ENST00000468612 LRRC24Q50LG9 513 aa14.01□□□□□ -0.17
NEDD9-207ENST00000468612 METTL24Q5JXM2 366 aa14.01□□□□□ -0.17
NEDD9-207ENST00000468612 FRMPD3Q5JV73 1810 aa14.01□□□□□ -0.17
NEDD9-207ENST00000468612 DDTLA6NHG4 134 aaPredicted RBP14□□□□□ -0.17
NEDD9-207ENST00000468612 F6X3S4 739 aa14□□□□□ -0.17
NEDD9-207ENST00000468612 FGFR2P21802 821 aa14□□□□□ -0.17
NEDD9-207ENST00000468612 PRDX5P30044 214 aa14□□□□□ -0.17
NEDD9-207ENST00000468612 ATN1P54259 1190 aaPredicted RBP14□□□□□ -0.17
NEDD9-207ENST00000468612 CCL14Q16627 93 aa14□□□□□ -0.17
NEDD9-207ENST00000468612 KAZALD1Q96I82 304 aa14□□□□□ -0.17
NEDD9-207ENST00000468612 HMGCS2P54868 508 aa13.99□□□□□ -0.17
NEDD9-207ENST00000468612 SPP2Q13103 211 aa13.99□□□□□ -0.17
NEDD9-207ENST00000468612 GRIN2CQ14957 1233 aa13.99□□□□□ -0.17
NEDD9-207ENST00000468612 ATXN2LQ8WWM7 1075 aaKnown RBP13.99□□□□□ -0.17
NEDD9-207ENST00000468612 CACNA1FO60840 1977 aa13.98□□□□□ -0.17
NEDD9-207ENST00000468612 PEX10O60683 326 aa13.98□□□□□ -0.17
NEDD9-207ENST00000468612 SH3D19Q5HYK7 790 aa13.98□□□□□ -0.17
NEDD9-207ENST00000468612 MORN1Q5T089 497 aa13.98□□□□□ -0.17
NEDD9-207ENST00000468612 ZSCAN29Q8IWY8 852 aaPredicted RBP13.98□□□□□ -0.17
NEDD9-207ENST00000468612 ZNF280CQ8ND82 737 aa13.98□□□□□ -0.17
NEDD9-207ENST00000468612 ADAMTS19Q8TE59 1207 aa13.98□□□□□ -0.17
NEDD9-207ENST00000468612 BADQ92934 168 aa13.98□□□□□ -0.17
NEDD9-207ENST00000468612 SUCLG2Q96I99 432 aa13.98□□□□□ -0.17
NEDD9-207ENST00000468612 ASB2Q96Q27 587 aa13.98□□□□□ -0.17
NEDD9-207ENST00000468612 TXNRD2Q9NNW7 524 aa13.98□□□□□ -0.17
NEDD9-207ENST00000468612 ARIH1Q9Y4X5 557 aaPredicted RBP13.98□□□□□ -0.17
NEDD9-207ENST00000468612 PIEZO1Q92508 2521 aa13.97□□□□□ -0.17
NEDD9-207ENST00000468612 XIRP2A4UGR9 3374 aa13.97□□□□□ -0.17
NEDD9-207ENST00000468612 DNM1LO00429 736 aa13.97□□□□□ -0.17
NEDD9-207ENST00000468612 TBC1D12O60347 775 aa13.97□□□□□ -0.17
NEDD9-207ENST00000468612 IFIT1P09914 478 aaKnown RBP13.97□□□□□ -0.17
NEDD9-207ENST00000468612 MAPK4P31152 587 aa13.97□□□□□ -0.17
NEDD9-207ENST00000468612 RGS2P41220 211 aa13.97□□□□□ -0.17
NEDD9-207ENST00000468612 PDE3AQ14432 1141 aa13.97□□□□□ -0.17
NEDD9-207ENST00000468612 GPRC5AQ8NFJ5 357 aa13.97□□□□□ -0.17
NEDD9-207ENST00000468612 UHRF1Q96T88 793 aaPredicted RBP13.97□□□□□ -0.17
NEDD9-207ENST00000468612 APBA2Q99767 749 aa13.97□□□□□ -0.17
NEDD9-207ENST00000468612 TBC1D2Q9BYX2 928 aa13.97□□□□□ -0.17
NEDD9-207ENST00000468612 DDX4Q9NQI0 724 aaKnown RBP13.97□□□□□ -0.17
NEDD9-207ENST00000468612 ATP11BQ9Y2G3 1177 aa13.97□□□□□ -0.17
NEDD9-207ENST00000468612 MYH13Q9UKX3 1938 aa13.96□□□□□ -0.17
NEDD9-207ENST00000468612 CHD9Q3L8U1 2897 aa13.96□□□□□ -0.17
NEDD9-207ENST00000468612 LDHBP07195 334 aaKnown RBP13.96□□□□□ -0.17
NEDD9-207ENST00000468612 ZEB1P37275 1124 aaPredicted RBP13.96□□□□□ -0.17
NEDD9-207ENST00000468612 PUM3Q15397 648 aaKnown RBP13.96□□□□□ -0.17
NEDD9-207ENST00000468612 LPAR1Q92633 364 aa13.96□□□□□ -0.17
NEDD9-207ENST00000468612 OSBPL5Q9H0X9 879 aaPredicted RBP13.96□□□□□ -0.17
NEDD9-207ENST00000468612 C9orf78Q9NZ63 289 aaPredicted RBP13.96□□□□□ -0.17
NEDD9-207ENST00000468612 DDX20Q9UHI6 824 aaKnown RBP13.96□□□□□ -0.17
NEDD9-207ENST00000468612 RLFQ13129 1914 aa13.96□□□□□ -0.18
NEDD9-207ENST00000468612 GAKO14976 1311 aa13.95□□□□□ -0.18
NEDD9-207ENST00000468612 HOXA7P31268 230 aaPredicted RBP13.95□□□□□ -0.18
NEDD9-207ENST00000468612 IRX3P78415 501 aaPredicted RBP13.95□□□□□ -0.18
NEDD9-207ENST00000468612 RABL6Q3YEC7 729 aaPredicted RBP13.95□□□□□ -0.18
NEDD9-207ENST00000468612 GPR142Q7Z601 462 aa13.95□□□□□ -0.18
NEDD9-207ENST00000468612 P2RX7Q99572 595 aaKnown RBP13.95□□□□□ -0.18
NEDD9-207ENST00000468612 PORCNQ9H237 461 aa13.95□□□□□ -0.18
NEDD9-207ENST00000468612 PRDM5Q9NQX1 630 aaPredicted RBP13.95□□□□□ -0.18
NEDD9-207ENST00000468612 PDLIM7Q9NR12 457 aa13.95□□□□□ -0.18
NEDD9-207ENST00000468612 THEGQ9P2T0 379 aa13.95□□□□□ -0.18
NEDD9-207ENST00000468612 SALL1Q9NSC2 1324 aa13.94□□□□□ -0.18
NEDD9-207ENST00000468612 TRIM43BA6NCK2 446 aa13.94□□□□□ -0.18
NEDD9-207ENST00000468612 MSCO60682 206 aa13.94□□□□□ -0.18
NEDD9-207ENST00000468612 ALDH1L1O75891 902 aa13.94□□□□□ -0.18
NEDD9-207ENST00000468612 HERVK_113P62684 666 aa13.94□□□□□ -0.18
NEDD9-207ENST00000468612 SNX17Q15036 470 aa13.94□□□□□ -0.18
NEDD9-207ENST00000468612 Q3C1V9 767 aa13.94□□□□□ -0.18
NEDD9-207ENST00000468612 SLC39A5Q6ZMH5 540 aa13.94□□□□□ -0.18
NEDD9-207ENST00000468612 PLEKHH3Q7Z736 793 aa13.94□□□□□ -0.18
NEDD9-207ENST00000468612 TRIM43Q96BQ3 446 aaPredicted RBP13.94□□□□□ -0.18
NEDD9-207ENST00000468612 RNPC3Q96LT9 517 aaKnown RBP13.94□□□□□ -0.18
NEDD9-207ENST00000468612 C1QTNF1Q9BXJ1 281 aa13.94□□□□□ -0.18
NEDD9-207ENST00000468612 FLRT1Q9NZU1 646 aa13.94□□□□□ -0.18
NEDD9-207ENST00000468612 RBPJLQ9UBG7 517 aa13.94□□□□□ -0.18
NEDD9-207ENST00000468612 UTYO14607 1347 aa13.93□□□□□ -0.18
NEDD9-207ENST00000468612 FAM196BA6NMK8 535 aa13.93□□□□□ -0.18
NEDD9-207ENST00000468612 USP17L5A8MUK1 530 aa13.93□□□□□ -0.18
NEDD9-207ENST00000468612 DNAJB2P25686 324 aa13.93□□□□□ -0.18
NEDD9-207ENST00000468612 ERVK-9P63128 1117 aa13.93□□□□□ -0.18
NEDD9-207ENST00000468612 ERVK-24P63145 666 aa13.93□□□□□ -0.18
NEDD9-207ENST00000468612 MRPS5P82675 430 aaKnown RBP13.93□□□□□ -0.18
NEDD9-207ENST00000468612 RRP1BQ14684 758 aaKnown RBP13.93□□□□□ -0.18
NEDD9-207ENST00000468612 TRIM60Q495X7 471 aa13.93□□□□□ -0.18
NEDD9-207ENST00000468612 AKNAD1Q5T1N1 836 aa13.93□□□□□ -0.18
NEDD9-207ENST00000468612 POTEEQ6S8J3 1075 aa13.93□□□□□ -0.18
NEDD9-207ENST00000468612 SH3RF1Q7Z6J0 888 aa13.93□□□□□ -0.18
NEDD9-207ENST00000468612 ANKRD44Q8N8A2 993 aa13.93□□□□□ -0.18
NEDD9-207ENST00000468612 ZNF576Q9H609 170 aa13.93□□□□□ -0.18
NEDD9-207ENST00000468612 BICC1Q9H694 974 aaKnown RBP13.93□□□□□ -0.18
NEDD9-207ENST00000468612 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.93□□□□□ -0.18
NEDD9-207ENST00000468612 REV3LO60673 3130 aa13.93□□□□□ -0.18
NEDD9-207ENST00000468612 MYH2Q9UKX2 1941 aa13.92□□□□□ -0.18
NEDD9-207ENST00000468612 VAMP4O75379 141 aa13.92□□□□□ -0.18
NEDD9-207ENST00000468612 NBPF7P0C2Y1 421 aaPredicted RBP13.92□□□□□ -0.18
NEDD9-207ENST00000468612 SLC5A1P13866 664 aa13.92□□□□□ -0.18
NEDD9-207ENST00000468612 CAP2P40123 477 aa13.92□□□□□ -0.18
NEDD9-207ENST00000468612 EPHB4P54760 987 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms