RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 VEZTQ9HBM0 779 aa13.42□□□□□ -0.26
MSH5-214ENST00000468602 ANO2Q9NQ90 1003 aa13.42□□□□□ -0.26
MSH5-214ENST00000468602 ZNF112Q9UJU3 913 aa13.42□□□□□ -0.26
MSH5-214ENST00000468602 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.42□□□□□ -0.26
MSH5-214ENST00000468602 RBM8AQ9Y5S9 174 aaKnown RBP13.42□□□□□ -0.26
MSH5-214ENST00000468602 PASKQ96RG2 1323 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 PAPPA2Q9BXP8 1791 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 SEC24BO95487 1268 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 CYP21A2P08686 494 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 POTEIP0CG38 1075 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 POTEJP0CG39 1038 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 TDO2P48775 406 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 RBM25P49756 843 aaKnown RBP13.41□□□□□ -0.26
MSH5-214ENST00000468602 PLCD1P51178 756 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 PPARAQ07869 468 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 FSTL1Q12841 308 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 IMMTQ16891 758 aaKnown RBP13.41□□□□□ -0.26
MSH5-214ENST00000468602 RNF20Q5VTR2 975 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 JMYQ8N9B5 988 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 MTA3Q9BTC8 594 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 TMEM39BQ9GZU3 492 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 NBPF3Q9H094 633 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 ZNF287Q9HBT7 754 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 SERPINB13Q9UIV8 391 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 PALD1Q9ULE6 856 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 SSC5DA1L4H1 1573 aa13.41□□□□□ -0.26
MSH5-214ENST00000468602 ZNF213O14771 459 aa13.4□□□□□ -0.26
MSH5-214ENST00000468602 APPP05067 770 aa13.4□□□□□ -0.26
MSH5-214ENST00000468602 PICALMQ13492 652 aa13.4□□□□□ -0.26
MSH5-214ENST00000468602 EAPPQ56P03 285 aaPredicted RBP13.4□□□□□ -0.26
MSH5-214ENST00000468602 DCAF15Q66K64 600 aa13.4□□□□□ -0.26
MSH5-214ENST00000468602 CREB3L3Q68CJ9 461 aa13.4□□□□□ -0.26
MSH5-214ENST00000468602 SMC1BQ8NDV3 1235 aa13.4□□□□□ -0.26
MSH5-214ENST00000468602 CSRNP1Q96S65 589 aa13.4□□□□□ -0.26
MSH5-214ENST00000468602 RNF41Q9H4P4 317 aaPredicted RBP13.4□□□□□ -0.26
MSH5-214ENST00000468602 DNAJC18Q9H819 358 aa13.4□□□□□ -0.26
MSH5-214ENST00000468602 PLIN4Q96Q06 1357 aa13.4□□□□□ -0.26
MSH5-214ENST00000468602 GREB1LQ9C091 1923 aaPredicted RBP13.4□□□□□ -0.26
MSH5-214ENST00000468602 PHF20L1A8MW92 1017 aa13.39□□□□□ -0.27
MSH5-214ENST00000468602 SLC27A2O14975 620 aa13.39□□□□□ -0.27
MSH5-214ENST00000468602 POLR3DP05423 398 aaPredicted RBP13.39□□□□□ -0.27
MSH5-214ENST00000468602 SLC3A2P08195 630 aaKnown RBP13.39□□□□□ -0.27
MSH5-214ENST00000468602 NOVP48745 357 aa13.39□□□□□ -0.27
MSH5-214ENST00000468602 TCP10Q12799 353 aa13.39□□□□□ -0.27
MSH5-214ENST00000468602 KRT32Q14532 448 aa13.39□□□□□ -0.27
MSH5-214ENST00000468602 AKNAD1Q5T1N1 836 aa13.39□□□□□ -0.27
MSH5-214ENST00000468602 FBXL16Q8N461 479 aa13.39□□□□□ -0.27
MSH5-214ENST00000468602 CCDC17Q96LX7 622 aa13.39□□□□□ -0.27
MSH5-214ENST00000468602 TM6SF1Q9BZW5 370 aa13.39□□□□□ -0.27
MSH5-214ENST00000468602 CNNM2Q9H8M5 875 aa13.39□□□□□ -0.27
MSH5-214ENST00000468602 TRPM7Q96QT4 1865 aa13.39□□□□□ -0.27
MSH5-214ENST00000468602 WDR19Q8NEZ3 1342 aa13.39□□□□□ -0.27
MSH5-214ENST00000468602 ZKSCAN1P17029 563 aaPredicted RBP13.38□□□□□ -0.27
MSH5-214ENST00000468602 SHMT1P34896 483 aa13.38□□□□□ -0.27
MSH5-214ENST00000468602 PDE4BQ07343 736 aa13.38□□□□□ -0.27
MSH5-214ENST00000468602 NOL9Q5SY16 702 aaKnown RBP13.38□□□□□ -0.27
MSH5-214ENST00000468602 NBPF12Q5TAG4 269 aaPredicted RBP13.38□□□□□ -0.27
MSH5-214ENST00000468602 USP48Q86UV5 1035 aa13.38□□□□□ -0.27
MSH5-214ENST00000468602 CDCA5Q96FF9 252 aa13.38□□□□□ -0.27
MSH5-214ENST00000468602 GLIS2Q9BZE0 524 aaPredicted RBP13.38□□□□□ -0.27
MSH5-214ENST00000468602 TCP11L1Q9NUJ3 509 aa13.38□□□□□ -0.27
MSH5-214ENST00000468602 ADM5C9JUS6 153 aa13.37□□□□□ -0.27
MSH5-214ENST00000468602 CTNND1O60716 968 aaKnown RBP13.37□□□□□ -0.27
MSH5-214ENST00000468602 MCCP23508 829 aa13.37□□□□□ -0.27
MSH5-214ENST00000468602 NF2P35240 595 aa13.37□□□□□ -0.27
MSH5-214ENST00000468602 CDK8P49336 464 aa13.37□□□□□ -0.27
MSH5-214ENST00000468602 LDLRAD1Q5T700 205 aa13.37□□□□□ -0.27
MSH5-214ENST00000468602 MAP1SQ66K74 1059 aaPredicted RBP13.37□□□□□ -0.27
MSH5-214ENST00000468602 KLRG1Q96E93 195 aa13.37□□□□□ -0.27
MSH5-214ENST00000468602 ZNF341Q9BYN7 854 aa13.37□□□□□ -0.27
MSH5-214ENST00000468602 SYNPO2Q9UMS6 1093 aa13.37□□□□□ -0.27
MSH5-214ENST00000468602 TACC3Q9Y6A5 838 aa13.37□□□□□ -0.27
MSH5-214ENST00000468602 E7EWF7 191 aa13.36□□□□□ -0.27
MSH5-214ENST00000468602 PPP1R12BO60237 982 aaPredicted RBP13.36□□□□□ -0.27
MSH5-214ENST00000468602 USP2O75604 605 aaPredicted RBP13.36□□□□□ -0.27
MSH5-214ENST00000468602 HMGB1P09429 215 aaKnown RBP13.36□□□□□ -0.27
MSH5-214ENST00000468602 CYP2D6P10635 497 aa13.36□□□□□ -0.27
MSH5-214ENST00000468602 RASA1P20936 1047 aa13.36□□□□□ -0.27
MSH5-214ENST00000468602 MFSD6Q6ZSS7 791 aa13.36□□□□□ -0.27
MSH5-214ENST00000468602 TBC1D10CQ8IV04 446 aa13.36□□□□□ -0.27
MSH5-214ENST00000468602 ZSCAN29Q8IWY8 852 aaPredicted RBP13.36□□□□□ -0.27
MSH5-214ENST00000468602 CDAN1Q8IWY9 1227 aa13.36□□□□□ -0.27
MSH5-214ENST00000468602 RASEFQ8IZ41 740 aa13.36□□□□□ -0.27
MSH5-214ENST00000468602 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.36□□□□□ -0.27
MSH5-214ENST00000468602 ZNF526Q8TF50 670 aaPredicted RBP13.36□□□□□ -0.27
MSH5-214ENST00000468602 TBC1D32Q96NH3 1257 aa13.36□□□□□ -0.27
MSH5-214ENST00000468602 TBC1D2Q9BYX2 928 aa13.36□□□□□ -0.27
MSH5-214ENST00000468602 KRT23Q9C075 422 aa13.36□□□□□ -0.27
MSH5-214ENST00000468602 ALDH8A1Q9H2A2 487 aaPredicted RBP13.36□□□□□ -0.27
MSH5-214ENST00000468602 SAP30BPQ9UHR5 308 aaKnown RBP13.36□□□□□ -0.27
MSH5-214ENST00000468602 CLEC11AQ9Y240 323 aa13.36□□□□□ -0.27
MSH5-214ENST00000468602 SNX14Q9Y5W7 946 aa13.36□□□□□ -0.27
MSH5-214ENST00000468602 CYP2D7A0A087X1C5 515 aa13.35□□□□□ -0.27
MSH5-214ENST00000468602 IGKV6D-41A0A0C4DH26 115 aa13.35□□□□□ -0.27
MSH5-214ENST00000468602 MINDY4BA8MYZ0 360 aa13.35□□□□□ -0.27
MSH5-214ENST00000468602 CAP2P40123 477 aa13.35□□□□□ -0.27
MSH5-214ENST00000468602 PPP4R3BQ5MIZ7 849 aa13.35□□□□□ -0.27
MSH5-214ENST00000468602 STOX1Q6ZVD7 989 aa13.35□□□□□ -0.27
MSH5-214ENST00000468602 NEDD1Q8NHV4 660 aa13.35□□□□□ -0.27
MSH5-214ENST00000468602 ANKS1AQ92625 1134 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms