RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 GBP4Q96PP9 640 aa24.17■■□□□ 1.46
TMEM53-207ENST00000468117 USP40Q9NVE5 1235 aa24.17■■□□□ 1.46
TMEM53-207ENST00000468117 PCDHAC2Q9Y5I4 1007 aa24.17■■□□□ 1.46
TMEM53-207ENST00000468117 ORC4O43929 436 aa24.16■■□□□ 1.46
TMEM53-207ENST00000468117 RAD17O75943 681 aa24.16■■□□□ 1.46
TMEM53-207ENST00000468117 APOA5Q6Q788 366 aa24.16■■□□□ 1.46
TMEM53-207ENST00000468117 NSUN7Q8NE18 718 aaKnown RBP24.16■■□□□ 1.46
TMEM53-207ENST00000468117 LLPHQ9BRT6 129 aaKnown RBP24.16■■□□□ 1.46
TMEM53-207ENST00000468117 UBAC1Q9BSL1 405 aa24.16■■□□□ 1.46
TMEM53-207ENST00000468117 VPS33BQ9H267 617 aa24.16■■□□□ 1.46
TMEM53-207ENST00000468117 WDR33Q9C0J8 1336 aaKnown RBP24.16■■□□□ 1.46
TMEM53-207ENST00000468117 IARSP41252 1262 aaKnown RBP24.15■■□□□ 1.46
TMEM53-207ENST00000468117 PICALMQ13492 652 aa24.15■■□□□ 1.46
TMEM53-207ENST00000468117 WTAPQ15007 396 aa24.15■■□□□ 1.46
TMEM53-207ENST00000468117 CDC42EP5Q6NZY7 148 aa24.15■■□□□ 1.46
TMEM53-207ENST00000468117 NLGN2Q8NFZ4 835 aa24.15■■□□□ 1.46
TMEM53-207ENST00000468117 DDX11Q96FC9 970 aa24.15■■□□□ 1.46
TMEM53-207ENST00000468117 ZDHHC15Q96MV8 337 aa24.15■■□□□ 1.46
TMEM53-207ENST00000468117 TAOK3Q9H2K8 898 aa24.15■■□□□ 1.46
TMEM53-207ENST00000468117 ROBO3Q96MS0 1386 aa24.15■■□□□ 1.46
TMEM53-207ENST00000468117 ERICH2A1L162 156 aa24.15■■□□□ 1.46
TMEM53-207ENST00000468117 RXRAP19793 462 aa24.15■■□□□ 1.46
TMEM53-207ENST00000468117 RBM5P52756 815 aaKnown RBP eCLIP24.15■■□□□ 1.46
TMEM53-207ENST00000468117 SMARCC2Q8TAQ2 1214 aa24.15■■□□□ 1.46
TMEM53-207ENST00000468117 MTA3Q9BTC8 594 aa24.15■■□□□ 1.46
TMEM53-207ENST00000468117 TNKSO95271 1327 aa24.14■■□□□ 1.46
TMEM53-207ENST00000468117 PPFIA3O75145 1194 aa24.14■■□□□ 1.45
TMEM53-207ENST00000468117 WDHD1O75717 1129 aaPredicted RBP24.14■■□□□ 1.45
TMEM53-207ENST00000468117 BAG4O95429 457 aaKnown RBP24.14■■□□□ 1.45
TMEM53-207ENST00000468117 LARP1BQ659C4 914 aaKnown RBP24.14■■□□□ 1.45
TMEM53-207ENST00000468117 MRIQ9BWK5 157 aa24.14■■□□□ 1.45
TMEM53-207ENST00000468117 TCHHQ07283 1943 aa24.14■■□□□ 1.45
TMEM53-207ENST00000468117 CCDC69A6NI79 296 aa24.13■■□□□ 1.45
TMEM53-207ENST00000468117 HDLBPQ00341 1268 aaKnown RBP24.13■■□□□ 1.45
TMEM53-207ENST00000468117 FAM47AQ5JRC9 791 aa24.13■■□□□ 1.45
TMEM53-207ENST00000468117 CLEC17AQ6ZS10 378 aa24.13■■□□□ 1.45
TMEM53-207ENST00000468117 MICU3Q86XE3 530 aa24.13■■□□□ 1.45
TMEM53-207ENST00000468117 MYL10Q9BUA6 226 aa24.13■■□□□ 1.45
TMEM53-207ENST00000468117 DDX4Q9NQI0 724 aaKnown RBP24.13■■□□□ 1.45
TMEM53-207ENST00000468117 PTPDC1A2A3K4 754 aa24.13■■□□□ 1.45
TMEM53-207ENST00000468117 NFKBIEO00221 500 aa24.13■■□□□ 1.45
TMEM53-207ENST00000468117 PSMD14O00487 310 aa24.13■■□□□ 1.45
TMEM53-207ENST00000468117 NIM1KQ8IY84 436 aa24.13■■□□□ 1.45
TMEM53-207ENST00000468117 ZSCAN10Q96SZ4 725 aaPredicted RBP24.13■■□□□ 1.45
TMEM53-207ENST00000468117 SLC12A7Q9Y666 1083 aa24.13■■□□□ 1.45
TMEM53-207ENST00000468117 ARFGEF1Q9Y6D6 1849 aa24.13■■□□□ 1.45
TMEM53-207ENST00000468117 ZBTB43O43298 467 aa24.12■■□□□ 1.45
TMEM53-207ENST00000468117 METAP2P50579 478 aaKnown RBP eCLIP24.12■■□□□ 1.45
TMEM53-207ENST00000468117 SEC23AQ15436 765 aa24.12■■□□□ 1.45
TMEM53-207ENST00000468117 IQCA1Q86XH1 822 aa24.12■■□□□ 1.45
TMEM53-207ENST00000468117 SLC44A5Q8NCS7 719 aa24.12■■□□□ 1.45
TMEM53-207ENST00000468117 CHAMP1Q96JM3 812 aa24.12■■□□□ 1.45
TMEM53-207ENST00000468117 SERPINA10Q9UK55 444 aa24.12■■□□□ 1.45
TMEM53-207ENST00000468117 ZNRF3Q9ULT6 936 aa24.12■■□□□ 1.45
TMEM53-207ENST00000468117 ZSCAN22P10073 491 aaPredicted RBP24.11■■□□□ 1.45
TMEM53-207ENST00000468117 RSBN1LQ6PCB5 846 aaPredicted RBP24.11■■□□□ 1.45
TMEM53-207ENST00000468117 CCDC144CPQ8IYA2 1237 aa24.11■■□□□ 1.45
TMEM53-207ENST00000468117 ENAHQ8N8S7 591 aaPredicted RBP24.11■■□□□ 1.45
TMEM53-207ENST00000468117 SPON1Q9HCB6 807 aa24.11■■□□□ 1.45
TMEM53-207ENST00000468117 MTMR6Q9Y217 621 aa24.11■■□□□ 1.45
TMEM53-207ENST00000468117 VPS37CA5D8V6 355 aaPredicted RBP24.11■■□□□ 1.45
TMEM53-207ENST00000468117 DHX16O60231 1041 aaKnown RBP24.11■■□□□ 1.45
TMEM53-207ENST00000468117 PDCP20941 246 aa24.11■■□□□ 1.45
TMEM53-207ENST00000468117 CHMP4CQ96CF2 233 aa24.11■■□□□ 1.45
TMEM53-207ENST00000468117 MKNK2Q9HBH9 465 aa24.11■■□□□ 1.45
TMEM53-207ENST00000468117 MYH8P13535 1937 aa24.1■■□□□ 1.45
TMEM53-207ENST00000468117 TSPY2A6NKD2 308 aa24.1■■□□□ 1.45
TMEM53-207ENST00000468117 NMT2O60551 498 aa24.1■■□□□ 1.45
TMEM53-207ENST00000468117 VIL1P09327 827 aaKnown RBP24.1■■□□□ 1.45
TMEM53-207ENST00000468117 TMTC2Q8N394 836 aa24.1■■□□□ 1.45
TMEM53-207ENST00000468117 FAM184AQ8NB25 1140 aa24.1■■□□□ 1.45
TMEM53-207ENST00000468117 CPLX1O14810 134 aa24.1■■□□□ 1.45
TMEM53-207ENST00000468117 ADD1P35611 737 aaKnown RBP24.1■■□□□ 1.45
TMEM53-207ENST00000468117 HMGN5P82970 282 aaKnown RBP24.1■■□□□ 1.45
TMEM53-207ENST00000468117 NFIAQ12857 509 aa24.1■■□□□ 1.45
TMEM53-207ENST00000468117 MYO3BQ8WXR4 1341 aa24.1■■□□□ 1.45
TMEM53-207ENST00000468117 CDC27P30260 824 aa24.09■■□□□ 1.45
TMEM53-207ENST00000468117 CACNB3P54284 484 aa24.09■■□□□ 1.45
TMEM53-207ENST00000468117 ZBTB12Q9Y330 459 aaPredicted RBP24.09■■□□□ 1.45
TMEM53-207ENST00000468117 FOXD4L6Q3SYB3 417 aaPredicted RBP24.08■■□□□ 1.45
TMEM53-207ENST00000468117 FOXD4L3Q6VB84 417 aaPredicted RBP24.08■■□□□ 1.45
TMEM53-207ENST00000468117 SYNE3Q6ZMZ3 975 aa24.08■■□□□ 1.45
TMEM53-207ENST00000468117 GOLGA8AA7E2F4 631 aa24.08■■□□□ 1.44
TMEM53-207ENST00000468117 DDX11L8A8MPP1 907 aa24.08■■□□□ 1.44
TMEM53-207ENST00000468117 F13A1P00488 732 aa24.08■■□□□ 1.44
TMEM53-207ENST00000468117 TFAP4Q01664 338 aa24.08■■□□□ 1.44
TMEM53-207ENST00000468117 CFAP100Q494V2 611 aa24.08■■□□□ 1.44
TMEM53-207ENST00000468117 IFIT1BQ5T764 474 aaKnown RBP24.08■■□□□ 1.44
TMEM53-207ENST00000468117 C16orf86Q6ZW13 317 aa24.08■■□□□ 1.44
TMEM53-207ENST00000468117 CDC37L1Q7L3B6 337 aa24.08■■□□□ 1.44
TMEM53-207ENST00000468117 JDP2Q8WYK2 163 aa24.08■■□□□ 1.44
TMEM53-207ENST00000468117 GMLQ99445 158 aa24.08■■□□□ 1.44
TMEM53-207ENST00000468117 FDPSP14324 419 aaKnown RBP24.07■■□□□ 1.44
TMEM53-207ENST00000468117 CDK8P49336 464 aa24.07■■□□□ 1.44
TMEM53-207ENST00000468117 MCTP1Q6DN14 999 aa24.07■■□□□ 1.44
TMEM53-207ENST00000468117 ZNF654Q8IZM8 581 aa24.07■■□□□ 1.44
TMEM53-207ENST00000468117 OSBPL5Q9H0X9 879 aaPredicted RBP24.07■■□□□ 1.44
TMEM53-207ENST00000468117 CXCL9Q07325 125 aa24.06■■□□□ 1.44
TMEM53-207ENST00000468117 ZNF444Q8N0Y2 327 aaPredicted RBP24.06■■□□□ 1.44
TMEM53-207ENST00000468117 FAM217BQ9NTX9 383 aaPredicted RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms