RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 DNAJC18Q9H819 358 aa18.4■□□□□ 0.54
ATG4B-215ENST00000468018 ZCCHC17Q9NP64 241 aaKnown RBP18.4■□□□□ 0.54
ATG4B-215ENST00000468018 PI4KBQ9UBF8 816 aa18.4■□□□□ 0.54
ATG4B-215ENST00000468018 ZNF532Q9HCE3 1301 aa18.4■□□□□ 0.54
ATG4B-215ENST00000468018 MYH8P13535 1937 aa18.39■□□□□ 0.53
ATG4B-215ENST00000468018 CETPP11597 493 aa18.39■□□□□ 0.53
ATG4B-215ENST00000468018 PTPRAP18433 802 aa18.39■□□□□ 0.53
ATG4B-215ENST00000468018 SNAPC2Q13487 334 aa18.39■□□□□ 0.53
ATG4B-215ENST00000468018 RRP1BQ14684 758 aaKnown RBP18.39■□□□□ 0.53
ATG4B-215ENST00000468018 OTUD7BQ6GQQ9 843 aa18.39■□□□□ 0.53
ATG4B-215ENST00000468018 FAM43AQ8N2R8 423 aa18.39■□□□□ 0.53
ATG4B-215ENST00000468018 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.39■□□□□ 0.53
ATG4B-215ENST00000468018 FAM196BA6NMK8 535 aa18.38■□□□□ 0.53
ATG4B-215ENST00000468018 CRHR2Q13324 411 aa18.38■□□□□ 0.53
ATG4B-215ENST00000468018 UBE3CQ15386 1083 aa18.38■□□□□ 0.53
ATG4B-215ENST00000468018 GCC1Q96CN9 775 aa18.38■□□□□ 0.53
ATG4B-215ENST00000468018 BCL11AQ9H165 835 aa18.38■□□□□ 0.53
ATG4B-215ENST00000468018 PALD1Q9ULE6 856 aa18.38■□□□□ 0.53
ATG4B-215ENST00000468018 AFG3L2Q9Y4W6 797 aa18.38■□□□□ 0.53
ATG4B-215ENST00000468018 TTC41PQ6P2S7 1318 aa18.38■□□□□ 0.53
ATG4B-215ENST00000468018 MAGEB6P1A0A0J9YX57 407 aa18.37■□□□□ 0.53
ATG4B-215ENST00000468018 BTBD19C9JJ37 291 aa18.37■□□□□ 0.53
ATG4B-215ENST00000468018 CXCL11O14625 94 aa18.37■□□□□ 0.53
ATG4B-215ENST00000468018 CAP2P40123 477 aa18.37■□□□□ 0.53
ATG4B-215ENST00000468018 FOXP4Q8IVH2 680 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-215ENST00000468018 EXOC6Q8TAG9 804 aa18.37■□□□□ 0.53
ATG4B-215ENST00000468018 PI4K2BQ8TCG2 481 aa18.37■□□□□ 0.53
ATG4B-215ENST00000468018 SUPT16HQ9Y5B9 1047 aaKnown RBP18.37■□□□□ 0.53
ATG4B-215ENST00000468018 CHGBP05060 677 aa18.36■□□□□ 0.53
ATG4B-215ENST00000468018 SLFNL1Q499Z3 407 aa18.36■□□□□ 0.53
ATG4B-215ENST00000468018 TSHZ3Q63HK5 1081 aa18.36■□□□□ 0.53
ATG4B-215ENST00000468018 LCORLQ8N3X6 602 aa18.36■□□□□ 0.53
ATG4B-215ENST00000468018 OTUD7AQ8TE49 926 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-215ENST00000468018 MCOLN1Q9GZU1 580 aa18.36■□□□□ 0.53
ATG4B-215ENST00000468018 EHD4Q9H223 541 aa18.36■□□□□ 0.53
ATG4B-215ENST00000468018 A0A0G2JLL6 359 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-215ENST00000468018 PRRT2Q7Z6L0 340 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-215ENST00000468018 SMC5Q8IY18 1101 aa18.35■□□□□ 0.53
ATG4B-215ENST00000468018 KBTBD3Q8NAB2 608 aa18.35■□□□□ 0.53
ATG4B-215ENST00000468018 GPATCH3Q96I76 525 aa18.35■□□□□ 0.53
ATG4B-215ENST00000468018 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.35■□□□□ 0.532e-6■■□□□ 13.4
ATG4B-215ENST00000468018 PICK1Q9NRD5 415 aa18.35■□□□□ 0.53
ATG4B-215ENST00000468018 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-215ENST00000468018 ZHX2Q9Y6X8 837 aa18.35■□□□□ 0.53
ATG4B-215ENST00000468018 ADGRA2Q96PE1 1338 aa18.34■□□□□ 0.53
ATG4B-215ENST00000468018 FKTNO75072 461 aa18.34■□□□□ 0.53
ATG4B-215ENST00000468018 USP5P45974 858 aa18.34■□□□□ 0.53
ATG4B-215ENST00000468018 DGKZQ13574 1117 aa18.34■□□□□ 0.53
ATG4B-215ENST00000468018 CTU1Q7Z7A3 348 aaKnown RBP18.34■□□□□ 0.53
ATG4B-215ENST00000468018 ANKRD23Q86SG2 305 aa18.34■□□□□ 0.53
ATG4B-215ENST00000468018 ABHD8Q96I13 439 aa18.34■□□□□ 0.53
ATG4B-215ENST00000468018 DCP1AQ9NPI6 582 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-215ENST00000468018 SAP30BPQ9UHR5 308 aaKnown RBP18.34■□□□□ 0.53
ATG4B-215ENST00000468018 ZSWIM8A7E2V4 1837 aa18.34■□□□□ 0.53
ATG4B-215ENST00000468018 HLA-DOAP06340 250 aa18.33■□□□□ 0.52
ATG4B-215ENST00000468018 MX1P20591 662 aa18.33■□□□□ 0.52
ATG4B-215ENST00000468018 GABPAQ06546 454 aa18.33■□□□□ 0.52
ATG4B-215ENST00000468018 TAF1CQ15572 869 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-215ENST00000468018 GPAT2Q6NUI2 795 aa18.33■□□□□ 0.52
ATG4B-215ENST00000468018 TATDN1Q6P1N9 297 aa18.33■□□□□ 0.52
ATG4B-215ENST00000468018 TBC1D2Q9BYX2 928 aa18.33■□□□□ 0.52
ATG4B-215ENST00000468018 CRNKL1Q9BZJ0 848 aaKnown RBP18.33■□□□□ 0.52
ATG4B-215ENST00000468018 GINM1Q9NU53 330 aa18.33■□□□□ 0.52
ATG4B-215ENST00000468018 MGAMO43451 1857 aa18.33■□□□□ 0.52
ATG4B-215ENST00000468018 TLR2O60603 784 aa18.32■□□□□ 0.52
ATG4B-215ENST00000468018 PLCD1P51178 756 aa18.32■□□□□ 0.52
ATG4B-215ENST00000468018 JAG1P78504 1218 aa18.32■□□□□ 0.52
ATG4B-215ENST00000468018 ZSCAN25Q6NSZ9 544 aa18.32■□□□□ 0.52
ATG4B-215ENST00000468018 CCDC84Q86UT8 332 aaPredicted RBP18.32■□□□□ 0.52
ATG4B-215ENST00000468018 SDR42E1Q8WUS8 393 aa18.32■□□□□ 0.52
ATG4B-215ENST00000468018 PUS7LQ9H0K6 701 aaKnown RBP18.32■□□□□ 0.52
ATG4B-215ENST00000468018 ZFYVE28Q9HCC9 887 aa18.32■□□□□ 0.52
ATG4B-215ENST00000468018 STAP2Q9UGK3 403 aa18.32■□□□□ 0.52
ATG4B-215ENST00000468018 SERPINB13Q9UIV8 391 aa18.32■□□□□ 0.52
ATG4B-215ENST00000468018 ERC2O15083 957 aa18.31■□□□□ 0.52
ATG4B-215ENST00000468018 GLRX3O76003 335 aaKnown RBP18.31■□□□□ 0.52
ATG4B-215ENST00000468018 MBD4O95243 580 aa18.31■□□□□ 0.52
ATG4B-215ENST00000468018 CAP1Q01518 475 aa18.31■□□□□ 0.52
ATG4B-215ENST00000468018 ANKRD45Q5TZF3 282 aa18.31■□□□□ 0.52
ATG4B-215ENST00000468018 TTC6Q86TZ1 520 aa18.31■□□□□ 0.52
ATG4B-215ENST00000468018 ARMT1Q9H993 441 aa18.31■□□□□ 0.52
ATG4B-215ENST00000468018 PDHXO00330 501 aa18.3■□□□□ 0.52
ATG4B-215ENST00000468018 IGHDP01880 384 aa18.3■□□□□ 0.52
ATG4B-215ENST00000468018 ASNSP08243 561 aa18.3■□□□□ 0.52
ATG4B-215ENST00000468018 FASTKD5Q7L8L6 764 aaKnown RBP18.3■□□□□ 0.52
ATG4B-215ENST00000468018 CRACR2BQ8N4Y2 399 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-215ENST00000468018 WDR18Q9BV38 432 aa18.3■□□□□ 0.52
ATG4B-215ENST00000468018 RWDD1Q9H446 243 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-215ENST00000468018 ATP8A2Q9NTI2 1148 aa18.3■□□□□ 0.52
ATG4B-215ENST00000468018 SLC45A1Q9Y2W3 748 aa18.3■□□□□ 0.52
ATG4B-215ENST00000468018 USP17L5A8MUK1 530 aa18.29■□□□□ 0.52
ATG4B-215ENST00000468018 PRKAB2O43741 272 aa18.29■□□□□ 0.52
ATG4B-215ENST00000468018 SHMT1P34896 483 aa18.29■□□□□ 0.52
ATG4B-215ENST00000468018 SP3Q02447 781 aa18.29■□□□□ 0.52
ATG4B-215ENST00000468018 EVX2Q03828 476 aa18.29■□□□□ 0.52
ATG4B-215ENST00000468018 PKN2Q16513 984 aaKnown RBP18.29■□□□□ 0.52
ATG4B-215ENST00000468018 SHROOM1Q2M3G4 852 aaPredicted RBP18.29■□□□□ 0.52
ATG4B-215ENST00000468018 SLC4A8Q2Y0W8 1093 aa18.29■□□□□ 0.52
ATG4B-215ENST00000468018 SH3D19Q5HYK7 790 aa18.29■□□□□ 0.52
ATG4B-215ENST00000468018 C17orf99Q6UX52 265 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms