RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 FAM95CA0A1B0GW59 222 aa6.55□□□□□ -1.36
SSR3-204ENST00000467733 TIAF1O95411 115 aa6.55□□□□□ -1.36
SSR3-204ENST00000467733 BRINP3Q76B58 766 aa6.55□□□□□ -1.36
SSR3-204ENST00000467733 C12orf50Q8NA57 414 aaPredicted RBP6.55□□□□□ -1.36
SSR3-204ENST00000467733 TTC16Q8NEE8 873 aa6.55□□□□□ -1.36
SSR3-204ENST00000467733 BSNDQ8WZ55 320 aa6.55□□□□□ -1.36
SSR3-204ENST00000467733 YIPF2Q9BWQ6 316 aa6.55□□□□□ -1.36
SSR3-204ENST00000467733 KRTAP4-7Q9BYR0 210 aa6.55□□□□□ -1.36
SSR3-204ENST00000467733 SOX17Q9H6I2 414 aaPredicted RBP6.55□□□□□ -1.36
SSR3-204ENST00000467733 CNTN3Q9P232 1028 aa6.55□□□□□ -1.36
SSR3-204ENST00000467733 MYOM3Q5VTT5 1437 aa6.55□□□□□ -1.36
SSR3-204ENST00000467733 RIMS2Q9UQ26 1411 aa6.55□□□□□ -1.36
SSR3-204ENST00000467733 MARF1Q9Y4F3 1742 aaKnown RBP6.55□□□□□ -1.36
SSR3-204ENST00000467733 PNPLA6Q8IY17 1366 aa6.55□□□□□ -1.36
SSR3-204ENST00000467733 PIK3R4Q99570 1358 aa6.55□□□□□ -1.36
SSR3-204ENST00000467733 SPHKAPQ2M3C7 1700 aa6.54□□□□□ -1.36
SSR3-204ENST00000467733 NALCNQ8IZF0 1738 aa6.54□□□□□ -1.36
SSR3-204ENST00000467733 UNC13BO14795 1591 aa6.54□□□□□ -1.36
SSR3-204ENST00000467733 MST1RQ04912 1400 aa6.54□□□□□ -1.36
SSR3-204ENST00000467733 ADAMTS13Q76LX8 1427 aa6.54□□□□□ -1.36
SSR3-204ENST00000467733 JUNBP17275 347 aaPredicted RBP6.54□□□□□ -1.36
SSR3-204ENST00000467733 ATF3P18847 181 aa6.54□□□□□ -1.36
SSR3-204ENST00000467733 JAG1P78504 1218 aa6.54□□□□□ -1.36
SSR3-204ENST00000467733 IKBKEQ14164 716 aa6.54□□□□□ -1.36
SSR3-204ENST00000467733 OGFOD2Q6N063 350 aa6.54□□□□□ -1.36
SSR3-204ENST00000467733 CBLL1Q75N03 491 aa6.54□□□□□ -1.36
SSR3-204ENST00000467733 C1orf127Q8N9H9 656 aa6.54□□□□□ -1.36
SSR3-204ENST00000467733 AGBL5Q8NDL9 886 aa6.54□□□□□ -1.36
SSR3-204ENST00000467733 USP26Q9BXU7 913 aa6.54□□□□□ -1.36
SSR3-204ENST00000467733 C19orf44Q9H6X5 657 aa6.54□□□□□ -1.36
SSR3-204ENST00000467733 BSDC1Q9NW68 430 aaPredicted RBP6.54□□□□□ -1.36
SSR3-204ENST00000467733 TIMELESSQ9UNS1 1208 aa6.54□□□□□ -1.36
SSR3-204ENST00000467733 COL22A1Q8NFW1 1626 aaPredicted RBP6.54□□□□□ -1.36
SSR3-204ENST00000467733 PTPN23Q9H3S7 1636 aa6.54□□□□□ -1.36
SSR3-204ENST00000467733 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.53□□□□□ -1.36
SSR3-204ENST00000467733 ATRNO75882 1429 aa6.53□□□□□ -1.36
SSR3-204ENST00000467733 LOC100289279A0A1B0GTE1 492 aa6.53□□□□□ -1.36
SSR3-204ENST00000467733 ATG7O95352 703 aa6.53□□□□□ -1.36
SSR3-204ENST00000467733 ACPPP15309 386 aa6.53□□□□□ -1.36
SSR3-204ENST00000467733 USP11P51784 963 aa6.53□□□□□ -1.36
SSR3-204ENST00000467733 NFKBIBQ15653 356 aa6.53□□□□□ -1.36
SSR3-204ENST00000467733 TMEM164Q5U3C3 297 aa6.53□□□□□ -1.36
SSR3-204ENST00000467733 TP53INP2Q8IXH6 220 aa6.53□□□□□ -1.36
SSR3-204ENST00000467733 POU5F2Q8N7G0 328 aa6.53□□□□□ -1.36
SSR3-204ENST00000467733 C8orf37Q96NL8 207 aa6.53□□□□□ -1.36
SSR3-204ENST00000467733 NRXN3Q9Y4C0 1643 aa6.52□□□□□ -1.37
SSR3-204ENST00000467733 CYP26A1O43174 497 aa6.52□□□□□ -1.37
SSR3-204ENST00000467733 PPP1R15AO75807 674 aaPredicted RBP6.52□□□□□ -1.37
SSR3-204ENST00000467733 ITGB5P18084 799 aa6.52□□□□□ -1.37
SSR3-204ENST00000467733 SLC52A1Q9NWF4 448 aa6.52□□□□□ -1.37
SSR3-204ENST00000467733 TBX22Q9Y458 520 aa6.52□□□□□ -1.37
SSR3-204ENST00000467733 BRWD3Q6RI45 1802 aa6.52□□□□□ -1.37
SSR3-204ENST00000467733 ABCC5O15440 1437 aa6.51□□□□□ -1.37
SSR3-204ENST00000467733 PTCH1Q13635 1447 aa6.51□□□□□ -1.37
SSR3-204ENST00000467733 IQGAP3Q86VI3 1631 aa6.51□□□□□ -1.37
SSR3-204ENST00000467733 SOX1O00570 391 aaPredicted RBP6.51□□□□□ -1.37
SSR3-204ENST00000467733 EDN3P14138 238 aa6.51□□□□□ -1.37
SSR3-204ENST00000467733 EXOSC6Q5RKV6 272 aaKnown RBP6.51□□□□□ -1.37
SSR3-204ENST00000467733 VN1R5Q7Z5H4 357 aa6.51□□□□□ -1.37
SSR3-204ENST00000467733 ZAR1Q86SH2 424 aa6.51□□□□□ -1.37
SSR3-204ENST00000467733 ATCAYQ86WG3 371 aa6.51□□□□□ -1.37
SSR3-204ENST00000467733 CCDC82Q8N4S0 544 aa6.51□□□□□ -1.37
SSR3-204ENST00000467733 EDEM1Q92611 657 aa6.51□□□□□ -1.37
SSR3-204ENST00000467733 NXPE3Q969Y0 559 aa6.51□□□□□ -1.37
SSR3-204ENST00000467733 LRRC59Q96AG4 307 aaKnown RBP6.51□□□□□ -1.37
SSR3-204ENST00000467733 HHIPQ96QV1 700 aa6.51□□□□□ -1.37
SSR3-204ENST00000467733 OSMRQ99650 979 aa6.51□□□□□ -1.37
SSR3-204ENST00000467733 PTPRUQ92729 1446 aa6.5□□□□□ -1.37
SSR3-204ENST00000467733 ADGRL3Q9HAR2 1447 aa6.5□□□□□ -1.37
SSR3-204ENST00000467733 PDGFAP04085 211 aa6.5□□□□□ -1.37
SSR3-204ENST00000467733 MZF1P28698 734 aaPredicted RBP6.5□□□□□ -1.37
SSR3-204ENST00000467733 DNM1Q05193 864 aaKnown RBP6.5□□□□□ -1.37
SSR3-204ENST00000467733 C8orf34Q49A92 452 aa6.5□□□□□ -1.37
SSR3-204ENST00000467733 HGSNATQ68CP4 663 aa6.5□□□□□ -1.37
SSR3-204ENST00000467733 FLCNQ8NFG4 579 aa6.5□□□□□ -1.37
SSR3-204ENST00000467733 HELQQ8TDG4 1101 aa6.5□□□□□ -1.37
SSR3-204ENST00000467733 EZH1Q92800 747 aaPredicted RBP6.5□□□□□ -1.37
SSR3-204ENST00000467733 TBC1D32Q96NH3 1257 aa6.5□□□□□ -1.37
SSR3-204ENST00000467733 ZKSCAN3Q9BRR0 538 aa6.5□□□□□ -1.37
SSR3-204ENST00000467733 BHLHE41Q9C0J9 482 aaPredicted RBP6.5□□□□□ -1.37
SSR3-204ENST00000467733 CHRDQ9H2X0 955 aa6.5□□□□□ -1.37
SSR3-204ENST00000467733 DAPK1P53355 1430 aa6.5□□□□□ -1.37
SSR3-204ENST00000467733 BLMP54132 1417 aaPredicted RBP6.5□□□□□ -1.37
SSR3-204ENST00000467733 E9PCH4 1651 aa6.49□□□□□ -1.37
SSR3-204ENST00000467733 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.49□□□□□ -1.37
SSR3-204ENST00000467733 TRPA1O75762 1119 aa6.49□□□□□ -1.37
SSR3-204ENST00000467733 C8AP07357 584 aa6.49□□□□□ -1.37
SSR3-204ENST00000467733 ATP2B4P23634 1241 aa6.49□□□□□ -1.37
SSR3-204ENST00000467733 CYP27A1Q02318 531 aa6.49□□□□□ -1.37
SSR3-204ENST00000467733 NOM1Q5C9Z4 860 aaKnown RBP6.49□□□□□ -1.37
SSR3-204ENST00000467733 HP1BP3Q5SSJ5 553 aaPredicted RBP6.49□□□□□ -1.37
SSR3-204ENST00000467733 CDPF1Q6NVV7 123 aa6.49□□□□□ -1.37
SSR3-204ENST00000467733 NFXL1Q6ZNB6 911 aa6.49□□□□□ -1.37
SSR3-204ENST00000467733 C2CD4AQ8NCU7 369 aaPredicted RBP6.49□□□□□ -1.37
SSR3-204ENST00000467733 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.49□□□□□ -1.37
SSR3-204ENST00000467733 FBLIM1Q8WUP2 373 aa6.49□□□□□ -1.37
SSR3-204ENST00000467733 PBXIP1Q96AQ6 731 aa6.49□□□□□ -1.37
SSR3-204ENST00000467733 RRP7BPQ9NSQ0 103 aa6.49□□□□□ -1.37
SSR3-204ENST00000467733 PRKAG2Q9UGJ0 569 aa6.49□□□□□ -1.37
SSR3-204ENST00000467733 TRPC5Q9UL62 973 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms