RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 CDC27P30260 824 aa22■■□□□ 1.11
CHRNA4-203ENST00000467563 ADD1P35611 737 aaKnown RBP22■■□□□ 1.11
CHRNA4-203ENST00000467563 FLT1P17948 1338 aa22■■□□□ 1.11
CHRNA4-203ENST00000467563 NAV1Q8NEY1 1877 aa21.99■■□□□ 1.11
CHRNA4-203ENST00000467563 PPIP5K2O43314 1243 aa21.99■■□□□ 1.11
CHRNA4-203ENST00000467563 POLD1P28340 1107 aa21.99■■□□□ 1.11
CHRNA4-203ENST00000467563 PDE4BQ07343 736 aa21.99■■□□□ 1.11
CHRNA4-203ENST00000467563 FERMT3Q86UX7 667 aa21.99■■□□□ 1.11
CHRNA4-203ENST00000467563 CCDC144CPQ8IYA2 1237 aa21.99■■□□□ 1.11
CHRNA4-203ENST00000467563 DYNLL2Q96FJ2 89 aa21.99■■□□□ 1.11
CHRNA4-203ENST00000467563 ZSCAN10Q96SZ4 725 aaPredicted RBP21.99■■□□□ 1.11
CHRNA4-203ENST00000467563 FAM217BQ9NTX9 383 aaPredicted RBP21.99■■□□□ 1.11
CHRNA4-203ENST00000467563 ROBO3Q96MS0 1386 aa21.99■■□□□ 1.11
CHRNA4-203ENST00000467563 CPLX1O14810 134 aa21.99■■□□□ 1.11
CHRNA4-203ENST00000467563 PLCD1P51178 756 aa21.99■■□□□ 1.11
CHRNA4-203ENST00000467563 GRIPAP1Q4V328 841 aa21.99■■□□□ 1.11
CHRNA4-203ENST00000467563 RTKN2Q8IZC4 609 aa21.99■■□□□ 1.11
CHRNA4-203ENST00000467563 ENAHQ8N8S7 591 aaPredicted RBP21.99■■□□□ 1.11
CHRNA4-203ENST00000467563 UPF1Q92900 1129 aaKnown RBP eCLIP21.99■■□□□ 1.11
CHRNA4-203ENST00000467563 USP17L3A6NCW0 530 aa21.98■■□□□ 1.11
CHRNA4-203ENST00000467563 USP17L4A6NCW7 530 aa21.98■■□□□ 1.11
CHRNA4-203ENST00000467563 TGFB2P61812 414 aa21.98■■□□□ 1.11
CHRNA4-203ENST00000467563 FKBP1AP62942 108 aaKnown RBP21.98■■□□□ 1.11
CHRNA4-203ENST00000467563 USP17L1Q7RTZ2 530 aa21.98■■□□□ 1.11
CHRNA4-203ENST00000467563 TMTC2Q8N394 836 aa21.98■■□□□ 1.11
CHRNA4-203ENST00000467563 ATP6V1DQ9Y5K8 247 aa21.98■■□□□ 1.11
CHRNA4-203ENST00000467563 ZNF646O15015 1829 aaPredicted RBP21.98■■□□□ 1.11
CHRNA4-203ENST00000467563 GOLGA8AA7E2F4 631 aa21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 YDJCA8MPS7 323 aa21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 FAM47AQ5JRC9 791 aa21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 HHIPL2Q6UWX4 724 aa21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 PSMD1Q99460 953 aa21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 GDPD2Q9HCC8 539 aa21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 KIF3AQ9Y496 699 aa21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 DDX60LQ5H9U9 1706 aaKnown RBP21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 ADAMTSL1Q8N6G6 1762 aa21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 POLR3DP05423 398 aaPredicted RBP21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 FOSBP53539 338 aa21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 SKOR2Q2VWA4 1001 aaPredicted RBP21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 IQCA1Q86XH1 822 aa21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 KIAA0825Q8IV33 1275 aa21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 AMOTL1Q8IY63 956 aa21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 TEKT1Q969V4 418 aa21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 CNPY2Q9Y2B0 182 aa21.97■■□□□ 1.11
CHRNA4-203ENST00000467563 NID2Q14112 1375 aa21.96■■□□□ 1.11
CHRNA4-203ENST00000467563 H3BQV1 296 aa21.96■■□□□ 1.11
CHRNA4-203ENST00000467563 IFFO2Q5TF58 517 aa21.96■■□□□ 1.11
CHRNA4-203ENST00000467563 APOBEC3HQ6NTF7 200 aaKnown RBP21.96■■□□□ 1.11
CHRNA4-203ENST00000467563 SYNE3Q6ZMZ3 975 aa21.96■■□□□ 1.11
CHRNA4-203ENST00000467563 PIM2Q9P1W9 311 aa21.96■■□□□ 1.11
CHRNA4-203ENST00000467563 NMT2O60551 498 aa21.95■■□□□ 1.11
CHRNA4-203ENST00000467563 DNM1Q05193 864 aaKnown RBP21.95■■□□□ 1.11
CHRNA4-203ENST00000467563 NTRK3Q16288 839 aa21.95■■□□□ 1.11
CHRNA4-203ENST00000467563 ZNF654Q8IZM8 581 aa21.95■■□□□ 1.11
CHRNA4-203ENST00000467563 ORC3Q9UBD5 711 aaPredicted RBP21.95■■□□□ 1.11
CHRNA4-203ENST00000467563 WDHD1O75717 1129 aaPredicted RBP21.95■■□□□ 1.1
CHRNA4-203ENST00000467563 CRKP46108 304 aa21.95■■□□□ 1.1
CHRNA4-203ENST00000467563 SLC44A5Q8NCS7 719 aa21.95■■□□□ 1.1
CHRNA4-203ENST00000467563 SGIP1Q9BQI5 828 aa21.95■■□□□ 1.1
CHRNA4-203ENST00000467563 GZF1Q9H116 711 aaPredicted RBP21.95■■□□□ 1.1
CHRNA4-203ENST00000467563 TCHHQ07283 1943 aa21.94■■□□□ 1.1
CHRNA4-203ENST00000467563 GSE1Q14687 1217 aa21.94■■□□□ 1.1
CHRNA4-203ENST00000467563 FAM173BQ6P4H8 233 aa21.94■■□□□ 1.1
CHRNA4-203ENST00000467563 ZNF277Q9NRM2 450 aaPredicted RBP21.94■■□□□ 1.1
CHRNA4-203ENST00000467563 DDX49Q9Y6V7 483 aaKnown RBP21.94■■□□□ 1.1
CHRNA4-203ENST00000467563 IFIT1BQ5T764 474 aaKnown RBP21.94■■□□□ 1.1
CHRNA4-203ENST00000467563 CDC42EP5Q6NZY7 148 aa21.94■■□□□ 1.1
CHRNA4-203ENST00000467563 DDX4Q9NQI0 724 aaKnown RBP21.94■■□□□ 1.1
CHRNA4-203ENST00000467563 USP40Q9NVE5 1235 aa21.94■■□□□ 1.1
CHRNA4-203ENST00000467563 PCDHAC2Q9Y5I4 1007 aa21.94■■□□□ 1.1
CHRNA4-203ENST00000467563 FOCADQ5VW36 1801 aa21.93■■□□□ 1.1
CHRNA4-203ENST00000467563 TSPY2A6NKD2 308 aa21.93■■□□□ 1.1
CHRNA4-203ENST00000467563 RCAN1P53805 252 aa21.93■■□□□ 1.1
CHRNA4-203ENST00000467563 RESTQ13127 1097 aa21.93■■□□□ 1.1
CHRNA4-203ENST00000467563 PICALMQ13492 652 aa21.93■■□□□ 1.1
CHRNA4-203ENST00000467563 KLHL40Q2TBA0 621 aa21.93■■□□□ 1.1
CHRNA4-203ENST00000467563 USP48Q86UV5 1035 aa21.93■■□□□ 1.1
CHRNA4-203ENST00000467563 PHKBQ93100 1093 aa21.93■■□□□ 1.1
CHRNA4-203ENST00000467563 ZDHHC15Q96MV8 337 aa21.93■■□□□ 1.1
CHRNA4-203ENST00000467563 MRIQ9BWK5 157 aa21.93■■□□□ 1.1
CHRNA4-203ENST00000467563 MKNK2Q9HBH9 465 aa21.93■■□□□ 1.1
CHRNA4-203ENST00000467563 COL4A5P29400 1685 aa21.93■■□□□ 1.1
CHRNA4-203ENST00000467563 PSDA5PKW4 1024 aaPredicted RBP21.92■■□□□ 1.1
CHRNA4-203ENST00000467563 CDKL5O76039 1030 aa21.92■■□□□ 1.1
CHRNA4-203ENST00000467563 PPP1R1BQ9UD71 204 aaPredicted RBP21.92■■□□□ 1.1
CHRNA4-203ENST00000467563 NCLP19338 710 aaKnown RBP21.92■■□□□ 1.1
CHRNA4-203ENST00000467563 TFAP4Q01664 338 aa21.92■■□□□ 1.1
CHRNA4-203ENST00000467563 GUCY1B3Q02153 619 aa21.92■■□□□ 1.1
CHRNA4-203ENST00000467563 RTN1Q16799 776 aa21.92■■□□□ 1.1
CHRNA4-203ENST00000467563 CPLX2Q6PUV4 134 aaKnown RBP21.92■■□□□ 1.1
CHRNA4-203ENST00000467563 TMEM87AQ8NBN3 555 aa21.92■■□□□ 1.1
CHRNA4-203ENST00000467563 GPT2Q8TD30 523 aa21.92■■□□□ 1.1
CHRNA4-203ENST00000467563 NUP133Q8WUM0 1156 aa21.92■■□□□ 1.1
CHRNA4-203ENST00000467563 HDLBPQ00341 1268 aaKnown RBP21.91■■□□□ 1.1
CHRNA4-203ENST00000467563 C16orf86Q6ZW13 317 aa21.91■■□□□ 1.1
CHRNA4-203ENST00000467563 LARGE2Q8N3Y3 721 aa21.91■■□□□ 1.1
CHRNA4-203ENST00000467563 FANCBQ8NB91 859 aa21.91■■□□□ 1.1
CHRNA4-203ENST00000467563 MYH1P12882 1939 aa21.91■■□□□ 1.1
CHRNA4-203ENST00000467563 RASA1P20936 1047 aa21.91■■□□□ 1.1
CHRNA4-203ENST00000467563 DALRD3Q5D0E6 543 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms