RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 ORC4O43929 436 aa10.49□□□□□ -0.73
TMEM254-209ENST00000467529 MRE11P49959 708 aa10.49□□□□□ -0.73
TMEM254-209ENST00000467529 GTF2IP78347 998 aa10.49□□□□□ -0.73
TMEM254-209ENST00000467529 PLCB2Q00722 1185 aa10.49□□□□□ -0.73
TMEM254-209ENST00000467529 OTUD7BQ6GQQ9 843 aa10.49□□□□□ -0.73
TMEM254-209ENST00000467529 LEO1Q8WVC0 666 aaPredicted RBP10.49□□□□□ -0.73
TMEM254-209ENST00000467529 SPATA32Q96LK8 384 aa10.49□□□□□ -0.73
TMEM254-209ENST00000467529 ZSCAN10Q96SZ4 725 aaPredicted RBP10.49□□□□□ -0.73
TMEM254-209ENST00000467529 SCAND2PQ9GZW5 306 aaPredicted RBP10.49□□□□□ -0.73
TMEM254-209ENST00000467529 TMX4Q9H1E5 349 aaPredicted RBP10.49□□□□□ -0.73
TMEM254-209ENST00000467529 GRPEL1Q9HAV7 217 aa10.49□□□□□ -0.73
TMEM254-209ENST00000467529 ECM29Q5VYK3 1845 aa10.49□□□□□ -0.73
TMEM254-209ENST00000467529 DLEC1Q9Y238 1755 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 GPR75-ASB3A0A0A6YYF3 556 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 SLC3A2P08195 630 aaKnown RBP10.48□□□□□ -0.73
TMEM254-209ENST00000467529 BTDP43251 543 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 DOK7Q18PE1 504 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 C12orf60Q5U649 245 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 ZNF654Q8IZM8 581 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 ENAHQ8N8S7 591 aaPredicted RBP10.48□□□□□ -0.73
TMEM254-209ENST00000467529 FBXO18Q8NFZ0 1043 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 TGFBRAP1Q8WUH2 860 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 PHKBQ93100 1093 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 SYAP1Q96A49 352 aaPredicted RBP10.48□□□□□ -0.73
TMEM254-209ENST00000467529 NAV1Q8NEY1 1877 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 CDK5RAP2Q96SN8 1893 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 SLX4Q8IY92 1834 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 SYCE3A1L190 88 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 CHRNA5P30532 468 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 IARSP41252 1262 aaKnown RBP10.48□□□□□ -0.73
TMEM254-209ENST00000467529 BAG6P46379 1132 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 RTN1Q16799 776 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 SLC4A8Q2Y0W8 1093 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 DEFB132Q7Z7B7 95 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 ILDR1Q86SU0 546 aaPredicted RBP10.48□□□□□ -0.73
TMEM254-209ENST00000467529 IQCA1Q86XH1 822 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 CERS3Q8IU89 383 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 SLF2Q8IX21 1173 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 FBXW7Q969H0 707 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 FAM163AQ96GL9 167 aaPredicted RBP10.48□□□□□ -0.73
TMEM254-209ENST00000467529 ALG1Q9BT22 464 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 GJB4Q9NTQ9 266 aa10.48□□□□□ -0.73
TMEM254-209ENST00000467529 GAKO14976 1311 aa10.47□□□□□ -0.73
TMEM254-209ENST00000467529 RCAN1P53805 252 aa10.47□□□□□ -0.73
TMEM254-209ENST00000467529 PDE4BQ07343 736 aa10.47□□□□□ -0.73
TMEM254-209ENST00000467529 SF3B2Q13435 895 aaKnown RBP10.47□□□□□ -0.73
TMEM254-209ENST00000467529 FAM47AQ5JRC9 791 aa10.47□□□□□ -0.73
TMEM254-209ENST00000467529 MAPKAPK5Q8IW41 473 aa10.47□□□□□ -0.73
TMEM254-209ENST00000467529 RGS22Q8NE09 1264 aa10.47□□□□□ -0.73
TMEM254-209ENST00000467529 NUP133Q8WUM0 1156 aa10.47□□□□□ -0.73
TMEM254-209ENST00000467529 AIFM3Q96NN9 605 aa10.47□□□□□ -0.73
TMEM254-209ENST00000467529 EYA3Q99504 573 aa10.47□□□□□ -0.73
TMEM254-209ENST00000467529 PDGFDQ9GZP0 370 aaPredicted RBP10.47□□□□□ -0.73
TMEM254-209ENST00000467529 CFAP45Q9UL16 551 aa10.47□□□□□ -0.73
TMEM254-209ENST00000467529 STK36Q9NRP7 1315 aa10.47□□□□□ -0.73
TMEM254-209ENST00000467529 FMNL1O95466 1100 aaPredicted RBP10.46□□□□□ -0.73
TMEM254-209ENST00000467529 PLCG2P16885 1265 aa10.46□□□□□ -0.73
TMEM254-209ENST00000467529 IFNAR1P17181 557 aa10.46□□□□□ -0.73
TMEM254-209ENST00000467529 SSRP1Q08945 709 aaKnown RBP10.46□□□□□ -0.73
TMEM254-209ENST00000467529 CCDC183Q5T5S1 534 aa10.46□□□□□ -0.73
TMEM254-209ENST00000467529 IFIT1BQ5T764 474 aaKnown RBP10.46□□□□□ -0.73
TMEM254-209ENST00000467529 LRSAM1Q6UWE0 723 aa10.46□□□□□ -0.73
TMEM254-209ENST00000467529 TEX11Q8IYF3 940 aa10.46□□□□□ -0.73
TMEM254-209ENST00000467529 CERS5Q8N5B7 392 aa10.46□□□□□ -0.73
TMEM254-209ENST00000467529 FANCBQ8NB91 859 aa10.46□□□□□ -0.73
TMEM254-209ENST00000467529 DYNLL2Q96FJ2 89 aa10.46□□□□□ -0.73
TMEM254-209ENST00000467529 ZNF396Q96N95 335 aaPredicted RBP10.46□□□□□ -0.73
TMEM254-209ENST00000467529 SLC26A6Q9BXS9 759 aa10.46□□□□□ -0.73
TMEM254-209ENST00000467529 ZNF219Q9P2Y4 722 aaPredicted RBP10.46□□□□□ -0.73
TMEM254-209ENST00000467529 DAGLAQ9Y4D2 1042 aa10.46□□□□□ -0.73
TMEM254-209ENST00000467529 ROBO3Q96MS0 1386 aa10.46□□□□□ -0.73
TMEM254-209ENST00000467529 CCDC196A0A1B0GTZ2 297 aa10.46□□□□□ -0.74
TMEM254-209ENST00000467529 G3V3G9 751 aa10.46□□□□□ -0.74
TMEM254-209ENST00000467529 RHBDL3P58872 404 aa10.46□□□□□ -0.74
TMEM254-209ENST00000467529 DCAF8Q5TAQ9 597 aa10.46□□□□□ -0.74
TMEM254-209ENST00000467529 ATL3Q6DD88 541 aa10.46□□□□□ -0.74
TMEM254-209ENST00000467529 NBPF11Q86T75 865 aa10.46□□□□□ -0.74
TMEM254-209ENST00000467529 AMOTL1Q8IY63 956 aa10.46□□□□□ -0.74
TMEM254-209ENST00000467529 CNKSR1Q969H4 720 aa10.46□□□□□ -0.74
TMEM254-209ENST00000467529 MXD3Q9BW11 206 aa10.46□□□□□ -0.74
TMEM254-209ENST00000467529 FTOQ9C0B1 505 aaKnown RBP eCLIP10.46□□□□□ -0.74
TMEM254-209ENST00000467529 SAP30BPQ9UHR5 308 aaKnown RBP10.46□□□□□ -0.74
TMEM254-209ENST00000467529 RCOR1Q9UKL0 485 aa10.46□□□□□ -0.74
TMEM254-209ENST00000467529 SUGT1Q9Y2Z0 365 aa10.46□□□□□ -0.74
TMEM254-209ENST00000467529 TSPY2A6NKD2 308 aa10.45□□□□□ -0.74
TMEM254-209ENST00000467529 KIF28PB7ZC32 967 aa10.45□□□□□ -0.74
TMEM254-209ENST00000467529 F8W031 263 aaPredicted RBP10.45□□□□□ -0.74
TMEM254-209ENST00000467529 UBE2Q2LH0YL09 131 aa10.45□□□□□ -0.74
TMEM254-209ENST00000467529 NMT2O60551 498 aa10.45□□□□□ -0.74
TMEM254-209ENST00000467529 POLR3DP05423 398 aaPredicted RBP10.45□□□□□ -0.74
TMEM254-209ENST00000467529 PLCD1P51178 756 aa10.45□□□□□ -0.74
TMEM254-209ENST00000467529 KIF23Q02241 960 aaPredicted RBP10.45□□□□□ -0.74
TMEM254-209ENST00000467529 CEBPZQ03701 1054 aaKnown RBP10.45□□□□□ -0.74
TMEM254-209ENST00000467529 KRT40Q6A162 431 aa10.45□□□□□ -0.74
TMEM254-209ENST00000467529 CATIPQ7Z7H3 387 aa10.45□□□□□ -0.74
TMEM254-209ENST00000467529 CRACR2BQ8N4Y2 399 aaPredicted RBP10.45□□□□□ -0.74
TMEM254-209ENST00000467529 PGBD1Q96JS3 809 aa10.45□□□□□ -0.74
TMEM254-209ENST00000467529 USP28Q96RU2 1077 aa10.45□□□□□ -0.74
TMEM254-209ENST00000467529 PANK2Q9BZ23 570 aa10.45□□□□□ -0.74
TMEM254-209ENST00000467529 DDX60LQ5H9U9 1706 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms