RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 TRIM43Q96BQ3 446 aaPredicted RBP8.15□□□□□ -1.1
PTPRE-206ENST00000467366 TIFAQ96CG3 184 aa8.15□□□□□ -1.1
PTPRE-206ENST00000467366 FAM84BQ96KN1 310 aaPredicted RBP8.15□□□□□ -1.1
PTPRE-206ENST00000467366 PLA2G12BQ9BX93 195 aa8.15□□□□□ -1.1
PTPRE-206ENST00000467366 PCGF6Q9BYE7 350 aa8.15□□□□□ -1.1
PTPRE-206ENST00000467366 PDLIM7Q9NR12 457 aa8.15□□□□□ -1.1
PTPRE-206ENST00000467366 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.15□□□□□ -1.1
PTPRE-206ENST00000467366 IQSEC3Q9UPP2 1182 aaPredicted RBP8.15□□□□□ -1.1
PTPRE-206ENST00000467366 DAGLAQ9Y4D2 1042 aa8.15□□□□□ -1.1
PTPRE-206ENST00000467366 PIEZO1Q92508 2521 aa8.15□□□□□ -1.1
PTPRE-206ENST00000467366 LRRC37A2A6NM11 1700 aa8.15□□□□□ -1.11
PTPRE-206ENST00000467366 CACNA1AO00555 2505 aa8.14□□□□□ -1.11
PTPRE-206ENST00000467366 ATRNL1Q5VV63 1379 aa8.14□□□□□ -1.11
PTPRE-206ENST00000467366 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.14□□□□□ -1.11
PTPRE-206ENST00000467366 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.14□□□□□ -1.11
PTPRE-206ENST00000467366 ANKRD18BA2A2Z9 1011 aa8.14□□□□□ -1.11
PTPRE-206ENST00000467366 NEURL1BA8MQ27 555 aa8.14□□□□□ -1.11
PTPRE-206ENST00000467366 PEX10O60683 326 aa8.14□□□□□ -1.11
PTPRE-206ENST00000467366 PTMAP06454 111 aaKnown RBP8.14□□□□□ -1.11
PTPRE-206ENST00000467366 SLURP2P0DP57 97 aa8.14□□□□□ -1.11
PTPRE-206ENST00000467366 XRCC5P13010 732 aaKnown RBP8.14□□□□□ -1.11
PTPRE-206ENST00000467366 ZKSCAN1P17029 563 aaPredicted RBP8.14□□□□□ -1.11
PTPRE-206ENST00000467366 HIBADHP31937 336 aaKnown RBP8.14□□□□□ -1.11
PTPRE-206ENST00000467366 SLC39A5Q6ZMH5 540 aa8.14□□□□□ -1.11
PTPRE-206ENST00000467366 NUDT12Q9BQG2 462 aa8.14□□□□□ -1.11
PTPRE-206ENST00000467366 PNNQ9H307 717 aaKnown RBP8.14□□□□□ -1.11
PTPRE-206ENST00000467366 PICK1Q9NRD5 415 aa8.14□□□□□ -1.11
PTPRE-206ENST00000467366 CXXC1Q9P0U4 656 aaPredicted RBP8.14□□□□□ -1.11
PTPRE-206ENST00000467366 NAP1L2Q9ULW6 460 aaPredicted RBP8.14□□□□□ -1.11
PTPRE-206ENST00000467366 MUC6Q6W4X9 2439 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 PI4KAP2A4QPH2 592 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 SMIM22K7EJ46 135 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 DNM1LO00429 736 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 DDX58O95786 925 aaKnown RBP8.13□□□□□ -1.11
PTPRE-206ENST00000467366 IGFBP4P22692 258 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 PBX2P40425 430 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 GCLCP48506 637 aaPredicted RBP8.13□□□□□ -1.11
PTPRE-206ENST00000467366 CASP7P55210 303 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 NHLH1Q02575 133 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 LMOD3Q0VAK6 560 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 NFIAQ12857 509 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 CHAF1AQ13111 956 aaPredicted RBP8.13□□□□□ -1.11
PTPRE-206ENST00000467366 NEUROD2Q15784 382 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 TRIM60Q495X7 471 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 ZFPM1Q8IX07 1006 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 PI4KAP1Q8N8J0 262 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 USP6NLQ92738 828 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 ZNF594Q96JF6 807 aaPredicted RBP8.13□□□□□ -1.11
PTPRE-206ENST00000467366 TSHZ2Q9NRE2 1034 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 FAM198AQ9UFP1 575 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 PNMA3Q9UL41 463 aa8.13□□□□□ -1.11
PTPRE-206ENST00000467366 NCOR1O75376 2440 aa8.12□□□□□ -1.11
PTPRE-206ENST00000467366 ELL2O00472 640 aaPredicted RBP8.12□□□□□ -1.11
PTPRE-206ENST00000467366 SETQ01105 290 aaPredicted RBP8.12□□□□□ -1.11
PTPRE-206ENST00000467366 SNX17Q15036 470 aa8.12□□□□□ -1.11
PTPRE-206ENST00000467366 GJC2Q5T442 439 aaPredicted RBP8.12□□□□□ -1.11
PTPRE-206ENST00000467366 KSR2Q6VAB6 950 aa8.12□□□□□ -1.11
PTPRE-206ENST00000467366 TRMT44Q8IYL2 757 aaKnown RBP8.12□□□□□ -1.11
PTPRE-206ENST00000467366 LPAR1Q92633 364 aa8.12□□□□□ -1.11
PTPRE-206ENST00000467366 MRIQ9BWK5 157 aa8.12□□□□□ -1.11
PTPRE-206ENST00000467366 PBX4Q9BYU1 374 aa8.12□□□□□ -1.11
PTPRE-206ENST00000467366 ASCC2Q9H1I8 757 aaPredicted RBP8.12□□□□□ -1.11
PTPRE-206ENST00000467366 MORF4L1Q9UBU8 362 aa8.12□□□□□ -1.11
PTPRE-206ENST00000467366 DDX20Q9UHI6 824 aaKnown RBP8.12□□□□□ -1.11
PTPRE-206ENST00000467366 TRIM35Q9UPQ4 493 aa8.12□□□□□ -1.11
PTPRE-206ENST00000467366 GBF1Q92538 1859 aa8.12□□□□□ -1.11
PTPRE-206ENST00000467366 ATAD5Q96QE3 1844 aa8.11□□□□□ -1.11
PTPRE-206ENST00000467366 GRXCR1A8MXD5 290 aa8.11□□□□□ -1.11
PTPRE-206ENST00000467366 NEXNQ0ZGT2 675 aa8.11□□□□□ -1.11
PTPRE-206ENST00000467366 IFIT5Q13325 482 aaKnown RBP8.11□□□□□ -1.11
PTPRE-206ENST00000467366 GCKRQ14397 625 aa8.11□□□□□ -1.11
PTPRE-206ENST00000467366 CDC42EP5Q6NZY7 148 aa8.11□□□□□ -1.11
PTPRE-206ENST00000467366 HHIPL2Q6UWX4 724 aa8.11□□□□□ -1.11
PTPRE-206ENST00000467366 PROCA1Q8NCQ7 364 aaPredicted RBP8.11□□□□□ -1.11
PTPRE-206ENST00000467366 SOCS4Q8WXH5 440 aa8.11□□□□□ -1.11
PTPRE-206ENST00000467366 MBIPQ9NS73 344 aa8.11□□□□□ -1.11
PTPRE-206ENST00000467366 FLRT1Q9NZU1 646 aa8.11□□□□□ -1.11
PTPRE-206ENST00000467366 CNGA1P29973 690 aa8.1□□□□□ -1.11
PTPRE-206ENST00000467366 FOXO4P98177 505 aa8.1□□□□□ -1.11
PTPRE-206ENST00000467366 UBE4AQ14139 1066 aa8.1□□□□□ -1.11
PTPRE-206ENST00000467366 MORN1Q5T089 497 aa8.1□□□□□ -1.11
PTPRE-206ENST00000467366 LDHAL6AQ6ZMR3 332 aa8.1□□□□□ -1.11
PTPRE-206ENST00000467366 FBXO33Q7Z6M2 555 aa8.1□□□□□ -1.11
PTPRE-206ENST00000467366 MICALL1Q8N3F8 863 aa8.1□□□□□ -1.11
PTPRE-206ENST00000467366 TBC1D22AQ8WUA7 517 aa8.1□□□□□ -1.11
PTPRE-206ENST00000467366 PORCNQ9H237 461 aa8.1□□□□□ -1.11
PTPRE-206ENST00000467366 TSPYL2Q9H2G4 693 aaPredicted RBP8.1□□□□□ -1.11
PTPRE-206ENST00000467366 TXNRD2Q9NNW7 524 aa8.1□□□□□ -1.11
PTPRE-206ENST00000467366 SPINK5Q9NQ38 1064 aaPredicted RBP8.1□□□□□ -1.11
PTPRE-206ENST00000467366 CNNM1Q9NRU3 951 aa8.1□□□□□ -1.11
PTPRE-206ENST00000467366 MYH13Q9UKX3 1938 aa8.09□□□□□ -1.11
PTPRE-206ENST00000467366 MAST3O60307 1309 aa8.09□□□□□ -1.11
PTPRE-206ENST00000467366 PRR33A8MZF0 331 aa8.09□□□□□ -1.11
PTPRE-206ENST00000467366 PI4K2BG5E9Z4 385 aa8.09□□□□□ -1.11
PTPRE-206ENST00000467366 TLL1O43897 1013 aa8.09□□□□□ -1.11
PTPRE-206ENST00000467366 CTNND1O60716 968 aaKnown RBP8.09□□□□□ -1.11
PTPRE-206ENST00000467366 RGS2P41220 211 aa8.09□□□□□ -1.11
PTPRE-206ENST00000467366 HMGCS2P54868 508 aa8.09□□□□□ -1.11
PTPRE-206ENST00000467366 MAP3K10Q02779 954 aa8.09□□□□□ -1.11
PTPRE-206ENST00000467366 TLE2Q04725 743 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms