RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 ADM5C9JUS6 153 aa17.52■□□□□ 0.39
DDX56-208ENST00000467318 TOMM70O94826 608 aa17.52■□□□□ 0.39
DDX56-208ENST00000467318 PRAMEF18Q5VWM3 479 aa17.52■□□□□ 0.39
DDX56-208ENST00000467318 GLIS2Q9BZE0 524 aaPredicted RBP17.52■□□□□ 0.39
DDX56-208ENST00000467318 HERC5Q9UII4 1024 aaKnown RBP17.52■□□□□ 0.39
DDX56-208ENST00000467318 DDX60LQ5H9U9 1706 aaKnown RBP17.51■□□□□ 0.39
DDX56-208ENST00000467318 TBC1D12O60347 775 aa17.51■□□□□ 0.39
DDX56-208ENST00000467318 MCCP23508 829 aa17.51■□□□□ 0.39
DDX56-208ENST00000467318 MAP3K10Q02779 954 aa17.51■□□□□ 0.39
DDX56-208ENST00000467318 FMR1Q06787 632 aaKnown RBP eCLIP17.51■□□□□ 0.39
DDX56-208ENST00000467318 SLC4A8Q2Y0W8 1093 aa17.51■□□□□ 0.39
DDX56-208ENST00000467318 NBPF12Q5TAG4 269 aaPredicted RBP17.51■□□□□ 0.39
DDX56-208ENST00000467318 ZNF287Q9HBT7 754 aa17.51■□□□□ 0.39
DDX56-208ENST00000467318 CYP2D7A0A087X1C5 515 aa17.5■□□□□ 0.39
DDX56-208ENST00000467318 CYP21A2P08686 494 aa17.5■□□□□ 0.39
DDX56-208ENST00000467318 PCP11498 1178 aaKnown RBP17.5■□□□□ 0.39
DDX56-208ENST00000467318 HSPA4P34932 840 aa17.5■□□□□ 0.39
DDX56-208ENST00000467318 NF2P35240 595 aa17.5■□□□□ 0.39
DDX56-208ENST00000467318 EVX2Q03828 476 aa17.5■□□□□ 0.39
DDX56-208ENST00000467318 GABPAQ06546 454 aa17.5■□□□□ 0.39
DDX56-208ENST00000467318 DCAF15Q66K64 600 aa17.5■□□□□ 0.39
DDX56-208ENST00000467318 CRACR2BQ8N4Y2 399 aaPredicted RBP17.5■□□□□ 0.39
DDX56-208ENST00000467318 SMC1BQ8NDV3 1235 aa17.5■□□□□ 0.39
DDX56-208ENST00000467318 RBM46Q8TBY0 533 aaKnown RBP17.5■□□□□ 0.39
DDX56-208ENST00000467318 TRIM34Q9BYJ4 488 aa17.5■□□□□ 0.39
DDX56-208ENST00000467318 SWAP70Q9UH65 585 aa17.5■□□□□ 0.39
DDX56-208ENST00000467318 ROBO3Q96MS0 1386 aa17.5■□□□□ 0.39
DDX56-208ENST00000467318 SLURP2P0DP57 97 aa17.49■□□□□ 0.39
DDX56-208ENST00000467318 CYP2D6P10635 497 aa17.49■□□□□ 0.39
DDX56-208ENST00000467318 ZKSCAN1P17029 563 aaPredicted RBP17.49■□□□□ 0.39
DDX56-208ENST00000467318 HAND2P61296 217 aa17.49■□□□□ 0.39
DDX56-208ENST00000467318 PDE4BQ07343 736 aa17.49■□□□□ 0.39
DDX56-208ENST00000467318 CREB3L3Q68CJ9 461 aa17.49■□□□□ 0.39
DDX56-208ENST00000467318 RNF41Q9H4P4 317 aaPredicted RBP17.49■□□□□ 0.39
DDX56-208ENST00000467318 SMIM22K7EJ46 135 aa17.48■□□□□ 0.39
DDX56-208ENST00000467318 SLC27A2O14975 620 aa17.48■□□□□ 0.39
DDX56-208ENST00000467318 ITGBL1O95965 494 aaPredicted RBP17.48■□□□□ 0.39
DDX56-208ENST00000467318 NT5C2P49902 561 aa17.48■□□□□ 0.39
DDX56-208ENST00000467318 TSGA10IPQ3SY00 556 aa17.48■□□□□ 0.39
DDX56-208ENST00000467318 C16orf86Q6ZW13 317 aa17.48■□□□□ 0.39
DDX56-208ENST00000467318 CDCA5Q96FF9 252 aa17.48■□□□□ 0.39
DDX56-208ENST00000467318 PPP1R12BO60237 982 aaPredicted RBP17.48■□□□□ 0.39
DDX56-208ENST00000467318 FGRP09769 529 aa17.48■□□□□ 0.39
DDX56-208ENST00000467318 AKNAD1Q5T1N1 836 aa17.48■□□□□ 0.39
DDX56-208ENST00000467318 MFSD6Q6ZSS7 791 aa17.48■□□□□ 0.39
DDX56-208ENST00000467318 STAG1Q8WVM7 1258 aa17.48■□□□□ 0.39
DDX56-208ENST00000467318 KCNB2Q92953 911 aa17.48■□□□□ 0.39
DDX56-208ENST00000467318 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.48■□□□□ 0.39
DDX56-208ENST00000467318 TRAF5O00463 557 aa17.47■□□□□ 0.39
DDX56-208ENST00000467318 CTDSPL2Q05D32 466 aa17.47■□□□□ 0.39
DDX56-208ENST00000467318 MIGA2Q7L4E1 593 aa17.47■□□□□ 0.39
DDX56-208ENST00000467318 MKNK2Q9HBH9 465 aa17.47■□□□□ 0.39
DDX56-208ENST00000467318 CDK8P49336 464 aa17.46■□□□□ 0.39
DDX56-208ENST00000467318 KRT32Q14532 448 aa17.46■□□□□ 0.39
DDX56-208ENST00000467318 DYNLL2Q96FJ2 89 aa17.46■□□□□ 0.39
DDX56-208ENST00000467318 CNNM2Q9H8M5 875 aa17.46■□□□□ 0.39
DDX56-208ENST00000467318 LAMB1P07942 1786 aa17.46■□□□□ 0.39
DDX56-208ENST00000467318 ANAPC15P60006 121 aa17.45■□□□□ 0.38
DDX56-208ENST00000467318 FSTL1Q12841 308 aa17.45■□□□□ 0.38
DDX56-208ENST00000467318 TRDNQ13061 729 aa17.45■□□□□ 0.38
DDX56-208ENST00000467318 TATDN1Q6P1N9 297 aa17.45■□□□□ 0.38
DDX56-208ENST00000467318 ZNF341Q9BYN7 854 aa17.45■□□□□ 0.38
DDX56-208ENST00000467318 NBPF3Q9H094 633 aa17.45■□□□□ 0.38
DDX56-208ENST00000467318 DNAJC18Q9H819 358 aa17.45■□□□□ 0.38
DDX56-208ENST00000467318 FZD1Q9UP38 647 aa17.45■□□□□ 0.38
DDX56-208ENST00000467318 LAMA4Q16363 1823 aa17.45■□□□□ 0.38
DDX56-208ENST00000467318 ORC4O43929 436 aa17.45■□□□□ 0.38
DDX56-208ENST00000467318 TBC1D10CQ8IV04 446 aa17.45■□□□□ 0.38
DDX56-208ENST00000467318 ZNF444Q8N0Y2 327 aaPredicted RBP17.45■□□□□ 0.38
DDX56-208ENST00000467318 CCDC17Q96LX7 622 aa17.45■□□□□ 0.38
DDX56-208ENST00000467318 C22orf23Q9BZE7 217 aa17.45■□□□□ 0.38
DDX56-208ENST00000467318 KRT23Q9C075 422 aa17.45■□□□□ 0.38
DDX56-208ENST00000467318 E7EWF7 191 aa17.44■□□□□ 0.38
DDX56-208ENST00000467318 SHMT1P34896 483 aa17.44■□□□□ 0.38
DDX56-208ENST00000467318 FKBP1BP68106 108 aa17.44■□□□□ 0.38
DDX56-208ENST00000467318 CERKLQ49MI3 558 aaPredicted RBP17.44■□□□□ 0.38
DDX56-208ENST00000467318 RASEFQ8IZ41 740 aa17.44■□□□□ 0.38
DDX56-208ENST00000467318 STK11IPQ8N1F8 1099 aa17.44■□□□□ 0.38
DDX56-208ENST00000467318 SLC44A5Q8NCS7 719 aa17.44■□□□□ 0.38
DDX56-208ENST00000467318 KLRG1Q96E93 195 aa17.44■□□□□ 0.38
DDX56-208ENST00000467318 TBC1D32Q96NH3 1257 aa17.44■□□□□ 0.38
DDX56-208ENST00000467318 ZNF112Q9UJU3 913 aa17.44■□□□□ 0.38
DDX56-208ENST00000467318 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.44■□□□□ 0.38
DDX56-208ENST00000467318 SIPA1L1O43166 1804 aa17.44■□□□□ 0.38
DDX56-208ENST00000467318 SSC5DA1L4H1 1573 aa17.43■□□□□ 0.38
DDX56-208ENST00000467318 FAM196BA6NMK8 535 aa17.43■□□□□ 0.38
DDX56-208ENST00000467318 IREB2P48200 963 aaKnown RBP17.43■□□□□ 0.38
DDX56-208ENST00000467318 RBM25P49756 843 aaKnown RBP17.43■□□□□ 0.38
DDX56-208ENST00000467318 NFKBIBQ15653 356 aa17.43■□□□□ 0.38
DDX56-208ENST00000467318 NCOA7Q8NI08 942 aa17.43■□□□□ 0.38
DDX56-208ENST00000467318 TOMM22Q9NS69 142 aa17.43■□□□□ 0.38
DDX56-208ENST00000467318 SNX14Q9Y5W7 946 aa17.43■□□□□ 0.38
DDX56-208ENST00000467318 PASKQ96RG2 1323 aa17.43■□□□□ 0.38
DDX56-208ENST00000467318 PHF20L1A8MW92 1017 aa17.42■□□□□ 0.38
DDX56-208ENST00000467318 USP2O75604 605 aaPredicted RBP17.42■□□□□ 0.38
DDX56-208ENST00000467318 MAP3K11Q16584 847 aa17.42■□□□□ 0.38
DDX56-208ENST00000467318 ARMC9Q7Z3E5 817 aa17.42■□□□□ 0.38
DDX56-208ENST00000467318 RALYLQ86SE5 291 aaKnown RBP17.42■□□□□ 0.38
DDX56-208ENST00000467318 ESR2Q92731 530 aa17.42■□□□□ 0.38
DDX56-208ENST00000467318 GINM1Q9NU53 330 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms