RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 ZNF792Q3KQV3 632 aa8.76□□□□□ -1.01
ATG3-204ENST00000467275 UBE3DQ7Z6J8 389 aa8.76□□□□□ -1.01
ATG3-204ENST00000467275 WFDC3Q8IUB2 231 aa8.76□□□□□ -1.01
ATG3-204ENST00000467275 KRTAP1-3Q8IUG1 177 aa8.76□□□□□ -1.01
ATG3-204ENST00000467275 HEXIM2Q96MH2 286 aaKnown RBP8.76□□□□□ -1.01
ATG3-204ENST00000467275 PRAMEF27A3QJZ7 478 aa8.75□□□□□ -1.01
ATG3-204ENST00000467275 FUT4P22083 530 aa8.75□□□□□ -1.01
ATG3-204ENST00000467275 CD96P40200 585 aa8.75□□□□□ -1.01
ATG3-204ENST00000467275 FGD1P98174 961 aa8.75□□□□□ -1.01
ATG3-204ENST00000467275 KRTAP19-1Q8IUB9 90 aa8.75□□□□□ -1.01
ATG3-204ENST00000467275 ZNF507Q8TCN5 953 aa8.75□□□□□ -1.01
ATG3-204ENST00000467275 PLAGL2Q9UPG8 496 aa8.75□□□□□ -1.01
ATG3-204ENST00000467275 LMNB1P20700 586 aa8.74□□□□□ -1.01
ATG3-204ENST00000467275 INPP5AQ14642 412 aa8.74□□□□□ -1.01
ATG3-204ENST00000467275 TTBK2Q6IQ55 1244 aa8.74□□□□□ -1.01
ATG3-204ENST00000467275 LRFN4Q6PJG9 635 aa8.74□□□□□ -1.01
ATG3-204ENST00000467275 HDXQ7Z353 690 aa8.74□□□□□ -1.01
ATG3-204ENST00000467275 IGF2BP3O00425 579 aaKnown RBP eCLIP8.73□□□□□ -1.01
ATG3-204ENST00000467275 BIN1O00499 593 aa8.73□□□□□ -1.01
ATG3-204ENST00000467275 PTPN11Q06124 597 aaPredicted RBP8.73□□□□□ -1.01
ATG3-204ENST00000467275 CCDC85BQ15834 202 aaPredicted RBP8.73□□□□□ -1.01
ATG3-204ENST00000467275 EAPPQ56P03 285 aaPredicted RBP8.73□□□□□ -1.01
ATG3-204ENST00000467275 ARMCX6Q7L4S7 300 aa8.73□□□□□ -1.01
ATG3-204ENST00000467275 FAM214BQ7L5A3 538 aa8.73□□□□□ -1.01
ATG3-204ENST00000467275 AEBP1Q8IUX7 1158 aa8.73□□□□□ -1.01
ATG3-204ENST00000467275 PI4K2BQ8TCG2 481 aa8.73□□□□□ -1.01
ATG3-204ENST00000467275 PLPPR2Q96GM1 343 aa8.73□□□□□ -1.01
ATG3-204ENST00000467275 SNX11Q9Y5W9 270 aa8.73□□□□□ -1.01
ATG3-204ENST00000467275 AK5Q9Y6K8 562 aa8.73□□□□□ -1.01
ATG3-204ENST00000467275 ANKRD33BA6NCL7 494 aa8.72□□□□□ -1.01
ATG3-204ENST00000467275 GNAT3A8MTJ3 354 aa8.72□□□□□ -1.01
ATG3-204ENST00000467275 LRIG2O94898 1065 aa8.72□□□□□ -1.01
ATG3-204ENST00000467275 YBX3P16989 372 aaKnown RBP eCLIP8.72□□□□□ -1.01
ATG3-204ENST00000467275 ANGEL2Q5VTE6 544 aaKnown RBP8.72□□□□□ -1.01
ATG3-204ENST00000467275 DUSP9Q99956 384 aaKnown RBP8.72□□□□□ -1.01
ATG3-204ENST00000467275 RC3H2Q9HBD1 1191 aaKnown RBP8.72□□□□□ -1.01
ATG3-204ENST00000467275 ETF1P62495 437 aaKnown RBP8.71□□□□□ -1.02
ATG3-204ENST00000467275 WIPI1Q5MNZ9 446 aaPredicted RBP8.71□□□□□ -1.02
ATG3-204ENST00000467275 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.71□□□□□ -1.02
ATG3-204ENST00000467275 SND1Q7KZF4 910 aaKnown RBP eCLIP8.71□□□□□ -1.02
ATG3-204ENST00000467275 CYFIP1Q7L576 1253 aa8.71□□□□□ -1.02
ATG3-204ENST00000467275 GAL3ST3Q96A11 431 aa8.71□□□□□ -1.02
ATG3-204ENST00000467275 TNKS2Q9H2K2 1166 aa8.71□□□□□ -1.02
ATG3-204ENST00000467275 PRDM5Q9NQX1 630 aaPredicted RBP8.71□□□□□ -1.02
ATG3-204ENST00000467275 SNCAIPQ9Y6H5 919 aa8.71□□□□□ -1.02
ATG3-204ENST00000467275 PAPLNO95428 1278 aa8.7□□□□□ -1.02
ATG3-204ENST00000467275 EOMESO95936 686 aa8.7□□□□□ -1.02
ATG3-204ENST00000467275 RNASE1P07998 156 aaKnown RBP8.7□□□□□ -1.02
ATG3-204ENST00000467275 ASB11Q8WXH4 323 aa8.7□□□□□ -1.02
ATG3-204ENST00000467275 WNT10AQ9GZT5 417 aa8.7□□□□□ -1.02
ATG3-204ENST00000467275 MBNL3Q9NUK0 354 aaKnown RBP8.7□□□□□ -1.02
ATG3-204ENST00000467275 RNF19AQ9NV58 838 aa8.7□□□□□ -1.02
ATG3-204ENST00000467275 PDIA4P13667 645 aaKnown RBP8.69□□□□□ -1.02
ATG3-204ENST00000467275 RPS26P62854 115 aaKnown RBP8.69□□□□□ -1.02
ATG3-204ENST00000467275 OGFOD2Q6N063 350 aa8.69□□□□□ -1.02
ATG3-204ENST00000467275 FOXQ1Q9C009 403 aa8.69□□□□□ -1.02
ATG3-204ENST00000467275 FBRSQ9HAH7 460 aa8.69□□□□□ -1.02
ATG3-204ENST00000467275 ADAMTS6Q9UKP5 1117 aa8.69□□□□□ -1.02
ATG3-204ENST00000467275 IKZF1Q13422 519 aa8.68□□□□□ -1.02
ATG3-204ENST00000467275 MAP3K11Q16584 847 aa8.68□□□□□ -1.02
ATG3-204ENST00000467275 ATG4DQ86TL0 474 aaPredicted RBP8.68□□□□□ -1.02
ATG3-204ENST00000467275 SPACA3Q8IXA5 215 aa8.68□□□□□ -1.02
ATG3-204ENST00000467275 TPX2Q9ULW0 747 aaKnown RBP8.68□□□□□ -1.02
ATG3-204ENST00000467275 MAPK8IP1Q9UQF2 711 aa8.68□□□□□ -1.02
ATG3-204ENST00000467275 SLITRK5O94991 958 aa8.67□□□□□ -1.02
ATG3-204ENST00000467275 CDK8P49336 464 aa8.67□□□□□ -1.02
ATG3-204ENST00000467275 SEPT6Q14141 434 aa8.67□□□□□ -1.02
ATG3-204ENST00000467275 SLBPQ14493 270 aaKnown RBP eCLIP8.67□□□□□ -1.02
ATG3-204ENST00000467275 NKPD1Q17RQ9 610 aa8.67□□□□□ -1.02
ATG3-204ENST00000467275 HID1Q8IV36 788 aa8.67□□□□□ -1.02
ATG3-204ENST00000467275 MFSD2AQ8NA29 543 aa8.67□□□□□ -1.02
ATG3-204ENST00000467275 MIPEPQ99797 713 aa8.67□□□□□ -1.02
ATG3-204ENST00000467275 PCDHB5Q9Y5E4 795 aa8.67□□□□□ -1.02
ATG3-204ENST00000467275 CLCN7P51798 805 aa8.66□□□□□ -1.02
ATG3-204ENST00000467275 NKG7Q16617 165 aa8.66□□□□□ -1.02
ATG3-204ENST00000467275 SLC23A3Q6PIS1 610 aa8.66□□□□□ -1.02
ATG3-204ENST00000467275 LRRN4CLQ8ND94 238 aa8.66□□□□□ -1.02
ATG3-204ENST00000467275 PARP2Q9UGN5 583 aa8.66□□□□□ -1.02
ATG3-204ENST00000467275 FAM155AB1AL88 458 aaPredicted RBP8.65□□□□□ -1.02
ATG3-204ENST00000467275 GRK4P32298 578 aa8.65□□□□□ -1.02
ATG3-204ENST00000467275 CAP2P40123 477 aa8.65□□□□□ -1.02
ATG3-204ENST00000467275 LIG3P49916 1009 aa8.65□□□□□ -1.02
ATG3-204ENST00000467275 ZP2Q05996 745 aa8.65□□□□□ -1.02
ATG3-204ENST00000467275 PSMD2Q13200 908 aa8.65□□□□□ -1.02
ATG3-204ENST00000467275 SFRP5Q5T4F7 317 aa8.65□□□□□ -1.02
ATG3-204ENST00000467275 AGMOQ6ZNB7 445 aa8.65□□□□□ -1.02
ATG3-204ENST00000467275 MIR1-1HGQ9H1L0 117 aa8.65□□□□□ -1.02
ATG3-204ENST00000467275 XPCQ01831 940 aaPredicted RBP8.64□□□□□ -1.03
ATG3-204ENST00000467275 MEI1Q5TIA1 1274 aa8.64□□□□□ -1.03
ATG3-204ENST00000467275 XAGE3Q8WTP9 111 aa8.64□□□□□ -1.03
ATG3-204ENST00000467275 PRDM7Q9NQW5 492 aa8.64□□□□□ -1.03
ATG3-204ENST00000467275 PITPNM2Q9BZ72 1349 aa8.63□□□□□ -1.03
ATG3-204ENST00000467275 BTBD11A6QL63 1104 aa8.63□□□□□ -1.03
ATG3-204ENST00000467275 RLBP1P12271 317 aa8.63□□□□□ -1.03
ATG3-204ENST00000467275 PRAMEF13Q5VWM6 474 aa8.63□□□□□ -1.03
ATG3-204ENST00000467275 ZNF746Q6NUN9 644 aaPredicted RBP8.63□□□□□ -1.03
ATG3-204ENST00000467275 LETMD1Q6P1Q0 360 aa8.63□□□□□ -1.03
ATG3-204ENST00000467275 POU5F2Q8N7G0 328 aa8.63□□□□□ -1.03
ATG3-204ENST00000467275 FAM168AQ92567 244 aa8.63□□□□□ -1.03
ATG3-204ENST00000467275 PRR33A8MZF0 331 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms