RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 ARHGAP33O14559 1287 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 BAG3O95817 575 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 RCAN1P53805 252 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 STK3Q13188 491 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 KLHL40Q2TBA0 621 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 MSL1Q68DK7 614 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 CC2D2BQ6DHV5 1058 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 CHST3Q7LGC8 479 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 C2CD5Q86YS7 1000 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 CCDC125Q86Z20 511 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 SLF2Q8IX21 1173 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 TMEM87AQ8NBN3 555 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 NSUN7Q8NE18 718 aaKnown RBP11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 SLC16A10Q8TF71 515 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 SDR42E1Q8WUS8 393 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 CNKSR1Q969H4 720 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 EP400Q96L91 3159 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 CACNA1SQ13698 1873 aa11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 KLF18A0A0U1RQI7 1052 aa11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 CTDNEP1O95476 244 aa11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 CTDSPL2Q05D32 466 aa11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 DPP8Q6V1X1 898 aaPredicted RBP11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 TMTC2Q8N394 836 aa11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 GPR101Q96P66 508 aaPredicted RBP11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 EYA3Q99504 573 aa11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 CRISPLD2Q9H0B8 497 aa11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 DCP1AQ9NPI6 582 aaPredicted RBP11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 AATFQ9NY61 560 aaKnown RBP eCLIP11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 ARPP21Q9UBL0 812 aaPredicted RBP11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 MKRN1Q9UHC7 482 aaKnown RBP11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 BRPF3Q9ULD4 1205 aa11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 HPS5Q9UPZ3 1129 aa11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 TACC3Q9Y6A5 838 aa11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 MYH7P12883 1935 aa11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 TAF1P21675 1872 aa11.19□□□□□ -0.62
APOBEC1-202ENST00000467171 LRRC37AA6NMS7 1700 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 TIAM2Q8IVF5 1701 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 NID2Q14112 1375 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 MROH7-TTC4A0A0A0MT08 1334 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 GAKO14976 1311 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 GPR75-ASB3A0A0A6YYF3 556 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 PTPDC1A2A3K4 754 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 ORC4O43929 436 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 JAK2O60674 1132 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 SART3Q15020 963 aaKnown RBP11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 GRIPAP1Q4V328 841 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 CTR9Q6PD62 1173 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 FAM184AQ8NB25 1140 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 C7orf43Q8WVR3 580 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 ESR2Q92731 530 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 RTFDC1Q9BY42 306 aaPredicted RBP11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 ZC3H12CQ9C0D7 883 aaKnown RBP11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 LY9Q9HBG7 655 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 ZSWIM5Q9P217 1185 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 CASZ1Q86V15 1759 aa11.18□□□□□ -0.62
APOBEC1-202ENST00000467171 GOLGA8BA8MQT2 603 aa11.17□□□□□ -0.62
APOBEC1-202ENST00000467171 USP17L12C9JPN9 530 aa11.17□□□□□ -0.62
APOBEC1-202ENST00000467171 USP17L21D6R901 530 aa11.17□□□□□ -0.62
APOBEC1-202ENST00000467171 IFIT3O14879 490 aaKnown RBP11.17□□□□□ -0.62
APOBEC1-202ENST00000467171 KDM4AO75164 1064 aa11.17□□□□□ -0.62
APOBEC1-202ENST00000467171 PRPF40AO75400 957 aaKnown RBP11.17□□□□□ -0.62
APOBEC1-202ENST00000467171 SLC3A2P08195 630 aaKnown RBP11.17□□□□□ -0.62
APOBEC1-202ENST00000467171 CCT2P78371 535 aaKnown RBP11.17□□□□□ -0.62
APOBEC1-202ENST00000467171 CSPP1Q1MSJ5 1256 aa11.17□□□□□ -0.62
APOBEC1-202ENST00000467171 TMEM67Q5HYA8 995 aa11.17□□□□□ -0.62
APOBEC1-202ENST00000467171 FOXD4L5Q5VV16 416 aaPredicted RBP11.17□□□□□ -0.62
APOBEC1-202ENST00000467171 NKX2-3Q8TAU0 364 aa11.17□□□□□ -0.62
APOBEC1-202ENST00000467171 FOXD4L4Q8WXT5 416 aaPredicted RBP11.17□□□□□ -0.62
APOBEC1-202ENST00000467171 NOL10Q9BSC4 688 aaKnown RBP11.17□□□□□ -0.62
APOBEC1-202ENST00000467171 ZSCAN16Q9H4T2 348 aaPredicted RBP11.17□□□□□ -0.62
APOBEC1-202ENST00000467171 ISY1Q9ULR0 285 aaKnown RBP11.17□□□□□ -0.62
APOBEC1-202ENST00000467171 LTBP1Q14766 1721 aa11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 ERICH2A1L162 156 aa11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 VPS37CA5D8V6 355 aaPredicted RBP11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 MINDY4BA8MYZ0 360 aa11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 CDKL5O76039 1030 aa11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 MBD3O95983 291 aa11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 DEKP35659 375 aaKnown RBP11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 FKBP1AP62942 108 aaKnown RBP11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 PPP2R5BQ15173 497 aa11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 GRIK5Q16478 980 aa11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 PPP4R3BQ5MIZ7 849 aa11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 MFSD14BQ5SR56 506 aa11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 CPLX2Q6PUV4 134 aaKnown RBP11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 APOA5Q6Q788 366 aa11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 CDC37L1Q7L3B6 337 aa11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 PODNQ7Z5L7 613 aa11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 ZNF622Q969S3 477 aaKnown RBP eCLIP11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 NCOA5Q9HCD5 579 aaKnown RBP11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 JAG2Q9Y219 1238 aa11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 DDX49Q9Y6V7 483 aaKnown RBP11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 C10orf71Q711Q0 1435 aa11.16□□□□□ -0.62
APOBEC1-202ENST00000467171 ANKRD31Q8N7Z5 1873 aa11.15□□□□□ -0.62
APOBEC1-202ENST00000467171 H3BQV1 296 aa11.15□□□□□ -0.62
APOBEC1-202ENST00000467171 CPLX1O14810 134 aa11.15□□□□□ -0.62
APOBEC1-202ENST00000467171 ZBTB43O43298 467 aa11.15□□□□□ -0.62
APOBEC1-202ENST00000467171 FDPSP14324 419 aaKnown RBP11.15□□□□□ -0.62
APOBEC1-202ENST00000467171 METAP2P50579 478 aaKnown RBP eCLIP11.15□□□□□ -0.62
APOBEC1-202ENST00000467171 WTAPQ15007 396 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms