RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 PARD6BQ9BYG5 372 aa20.63■□□□□ 0.89
SNAPC3-205ENST00000467062 IQSEC3Q9UPP2 1182 aaPredicted RBP20.63■□□□□ 0.89
SNAPC3-205ENST00000467062 PARP3Q9Y6F1 533 aa20.63■□□□□ 0.89
SNAPC3-205ENST00000467062 CCDC151A5D8V7 595 aa20.63■□□□□ 0.89
SNAPC3-205ENST00000467062 PDE8AO60658 829 aa20.63■□□□□ 0.89
SNAPC3-205ENST00000467062 BRD3Q15059 726 aa20.63■□□□□ 0.89
SNAPC3-205ENST00000467062 TRIM65Q6PJ69 517 aa20.63■□□□□ 0.89
SNAPC3-205ENST00000467062 CCDC196A0A1B0GTZ2 297 aa20.62■□□□□ 0.89
SNAPC3-205ENST00000467062 CCDC73Q6ZRK6 1079 aa20.62■□□□□ 0.89
SNAPC3-205ENST00000467062 ZNF396Q96N95 335 aaPredicted RBP20.62■□□□□ 0.89
SNAPC3-205ENST00000467062 SUFUQ9UMX1 484 aa20.62■□□□□ 0.89
SNAPC3-205ENST00000467062 BCL9O00512 1426 aa20.62■□□□□ 0.89
SNAPC3-205ENST00000467062 WTIPA6NIX2 430 aaPredicted RBP20.62■□□□□ 0.89
SNAPC3-205ENST00000467062 EIF3JO75822 258 aaKnown RBP20.62■□□□□ 0.89
SNAPC3-205ENST00000467062 PDE6AP16499 860 aa20.62■□□□□ 0.89
SNAPC3-205ENST00000467062 SATB1Q01826 763 aa20.62■□□□□ 0.89
SNAPC3-205ENST00000467062 TMC6Q7Z403 805 aa20.62■□□□□ 0.89
SNAPC3-205ENST00000467062 RPAINQ86UA6 219 aa20.62■□□□□ 0.89
SNAPC3-205ENST00000467062 MICU3Q86XE3 530 aa20.62■□□□□ 0.89
SNAPC3-205ENST00000467062 MPHOSPH8Q99549 860 aa20.62■□□□□ 0.89
SNAPC3-205ENST00000467062 CDHR2Q9BYE9 1310 aa20.62■□□□□ 0.89
SNAPC3-205ENST00000467062 CTDSPL2Q05D32 466 aa20.61■□□□□ 0.89
SNAPC3-205ENST00000467062 TRDNQ13061 729 aa20.61■□□□□ 0.89
SNAPC3-205ENST00000467062 SF3A1Q15459 793 aaKnown RBP20.61■□□□□ 0.89
SNAPC3-205ENST00000467062 MSL3Q8N5Y2 521 aaKnown RBP20.61■□□□□ 0.89
SNAPC3-205ENST00000467062 AOPEPQ8N6M6 819 aa20.61■□□□□ 0.89
SNAPC3-205ENST00000467062 CEP120Q8N960 986 aa20.61■□□□□ 0.89
SNAPC3-205ENST00000467062 FAM107BQ9H098 131 aa20.61■□□□□ 0.89
SNAPC3-205ENST00000467062 A0A087WUV0 522 aaPredicted RBP20.61■□□□□ 0.89
SNAPC3-205ENST00000467062 KINO60870 393 aaKnown RBP20.61■□□□□ 0.89
SNAPC3-205ENST00000467062 NDUFA8P51970 172 aa20.61■□□□□ 0.89
SNAPC3-205ENST00000467062 FOXR1Q6PIV2 292 aa20.61■□□□□ 0.89
SNAPC3-205ENST00000467062 RSRC2Q7L4I2 434 aaKnown RBP20.61■□□□□ 0.89
SNAPC3-205ENST00000467062 ENGASEQ8NFI3 743 aa20.61■□□□□ 0.89
SNAPC3-205ENST00000467062 EPC1Q9H2F5 836 aa20.61■□□□□ 0.89
SNAPC3-205ENST00000467062 TADA2BQ86TJ2 420 aa20.6■□□□□ 0.89
SNAPC3-205ENST00000467062 MAGEB6Q8N7X4 407 aa20.6■□□□□ 0.89
SNAPC3-205ENST00000467062 AIDAQ96BJ3 306 aa20.6■□□□□ 0.89
SNAPC3-205ENST00000467062 PAPPAQ13219 1627 aa20.6■□□□□ 0.89
SNAPC3-205ENST00000467062 PRKAB2O43741 272 aa20.6■□□□□ 0.89
SNAPC3-205ENST00000467062 STK38Q15208 465 aa20.6■□□□□ 0.89
SNAPC3-205ENST00000467062 SMIM5Q71RC9 77 aa20.6■□□□□ 0.89
SNAPC3-205ENST00000467062 SDF4Q9BRK5 362 aa20.6■□□□□ 0.89
SNAPC3-205ENST00000467062 MARCKSP29966 332 aaPredicted RBP20.59■□□□□ 0.89
SNAPC3-205ENST00000467062 CDC27P30260 824 aa20.59■□□□□ 0.89
SNAPC3-205ENST00000467062 BCAMP50895 628 aa20.59■□□□□ 0.89
SNAPC3-205ENST00000467062 KCNQ4P56696 695 aa20.59■□□□□ 0.89
SNAPC3-205ENST00000467062 PPP2R3AQ06190 1150 aa20.59■□□□□ 0.89
SNAPC3-205ENST00000467062 RASGRF1Q13972 1273 aa20.59■□□□□ 0.89
SNAPC3-205ENST00000467062 GOLGA1Q92805 767 aa20.59■□□□□ 0.89
SNAPC3-205ENST00000467062 ARMT1Q9H993 441 aa20.59■□□□□ 0.89
SNAPC3-205ENST00000467062 NEDD4P46934 1319 aa20.59■□□□□ 0.89
SNAPC3-205ENST00000467062 FAM160A1Q05DH4 1040 aa20.59■□□□□ 0.89
SNAPC3-205ENST00000467062 ISM2Q6H9L7 571 aa20.59■□□□□ 0.89
SNAPC3-205ENST00000467062 HDXQ7Z353 690 aa20.59■□□□□ 0.89
SNAPC3-205ENST00000467062 CCDC82Q8N4S0 544 aa20.59■□□□□ 0.89
SNAPC3-205ENST00000467062 LINC00301Q8NCQ3 95 aa20.59■□□□□ 0.89
SNAPC3-205ENST00000467062 BIN1O00499 593 aa20.58■□□□□ 0.89
SNAPC3-205ENST00000467062 ZSCAN12O43309 604 aa20.58■□□□□ 0.89
SNAPC3-205ENST00000467062 TDO2P48775 406 aa20.58■□□□□ 0.89
SNAPC3-205ENST00000467062 ZNF34Q8IZ26 560 aa20.58■□□□□ 0.89
SNAPC3-205ENST00000467062 ZKSCAN3Q9BRR0 538 aa20.58■□□□□ 0.89
SNAPC3-205ENST00000467062 PDE11AQ9HCR9 933 aa20.58■□□□□ 0.89
SNAPC3-205ENST00000467062 TACC3Q9Y6A5 838 aa20.58■□□□□ 0.89
SNAPC3-205ENST00000467062 NWD2Q9ULI1 1742 aa20.58■□□□□ 0.88
SNAPC3-205ENST00000467062 TXLNAP40222 546 aa20.58■□□□□ 0.88
SNAPC3-205ENST00000467062 USP8P40818 1118 aa20.58■□□□□ 0.88
SNAPC3-205ENST00000467062 MAP3K9P80192 1104 aa20.58■□□□□ 0.88
SNAPC3-205ENST00000467062 SPATA5Q8NB90 893 aa20.58■□□□□ 0.88
SNAPC3-205ENST00000467062 STRBPQ96SI9 672 aaKnown RBP20.58■□□□□ 0.88
SNAPC3-205ENST00000467062 MBD4O95243 580 aa20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 EIF5P55010 431 aaKnown RBP20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 PUM3Q15397 648 aaKnown RBP20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 RRP12Q5JTH9 1297 aaKnown RBP20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 CNPY4Q8N129 248 aa20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 MIGA1Q8NAN2 632 aa20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 HNRNPLLQ8WVV9 542 aaKnown RBP20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 XPO4Q9C0E2 1151 aaKnown RBP20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 ANGEL1Q9UNK9 670 aaKnown RBP20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 TCRBV5S4A2TA0A5A2 114 aa20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 IL6STP40189 918 aaPredicted RBP20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 METAP2P50579 478 aaKnown RBP eCLIP20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 MYSM1Q5VVJ2 828 aa20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 NFXL1Q6ZNB6 911 aa20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 FBXL16Q8N461 479 aa20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 LPIN2Q92539 896 aa20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 EPB41L4AQ9HCS5 686 aaPredicted RBP20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 RTEL1Q9NZ71 1219 aa20.57■□□□□ 0.88
SNAPC3-205ENST00000467062 SMIM22K7EJ46 135 aa20.56■□□□□ 0.88
SNAPC3-205ENST00000467062 INTS5Q6P9B9 1019 aaKnown RBP20.56■□□□□ 0.88
SNAPC3-205ENST00000467062 LRRC31Q6UY01 552 aa20.56■□□□□ 0.88
SNAPC3-205ENST00000467062 FCHSD1Q86WN1 690 aa20.56■□□□□ 0.88
SNAPC3-205ENST00000467062 TICAM2Q86XR7 235 aa20.56■□□□□ 0.88
SNAPC3-205ENST00000467062 CMTR1Q8N1G2 835 aaKnown RBP20.56■□□□□ 0.88
SNAPC3-205ENST00000467062 MRPS27Q92552 414 aaKnown RBP20.56■□□□□ 0.88
SNAPC3-205ENST00000467062 PPFIA4O75335 1185 aa20.56■□□□□ 0.88
SNAPC3-205ENST00000467062 CRKLP46109 303 aaKnown RBP20.56■□□□□ 0.88
SNAPC3-205ENST00000467062 TTF1Q15361 905 aaPredicted RBP20.56■□□□□ 0.88
SNAPC3-205ENST00000467062 DNAJC21Q5F1R6 531 aaKnown RBP20.56■□□□□ 0.88
SNAPC3-205ENST00000467062 FMR1NBQ8N0W7 255 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms