RNA–Protein interactions for RNA: ENST00000466872.2

C9orf135-202, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 794 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-202ENST00000466872 CHAF1AQ13111 956 aaPredicted RBP11.91□□□□□ -0.5
C9orf135-202ENST00000466872 PI16Q6UXB8 463 aa11.91□□□□□ -0.5
C9orf135-202ENST00000466872 TBC1D22AQ8WUA7 517 aa11.91□□□□□ -0.5
C9orf135-202ENST00000466872 DBNDD2Q9BQY9 259 aa11.91□□□□□ -0.5
C9orf135-202ENST00000466872 DBNLQ9UJU6 430 aaKnown RBP11.91□□□□□ -0.5
C9orf135-202ENST00000466872 SERPINA10Q9UK55 444 aa11.91□□□□□ -0.5
C9orf135-202ENST00000466872 AKAP2Q9Y2D5 859 aa11.91□□□□□ -0.5
C9orf135-202ENST00000466872 RFX7Q2KHR2 1363 aa11.91□□□□□ -0.5
C9orf135-202ENST00000466872 FOCADQ5VW36 1801 aa11.9□□□□□ -0.5
C9orf135-202ENST00000466872 PRDX5P30044 214 aa11.9□□□□□ -0.5
C9orf135-202ENST00000466872 MCAMP43121 646 aa11.9□□□□□ -0.5
C9orf135-202ENST00000466872 HDLBPQ00341 1268 aaKnown RBP11.9□□□□□ -0.5
C9orf135-202ENST00000466872 KRT26Q7Z3Y9 468 aa11.9□□□□□ -0.5
C9orf135-202ENST00000466872 VPS37DQ86XT2 251 aa11.9□□□□□ -0.5
C9orf135-202ENST00000466872 SCUBE3Q8IX30 993 aa11.9□□□□□ -0.5
C9orf135-202ENST00000466872 OGFOD1Q8N543 542 aa11.9□□□□□ -0.5
C9orf135-202ENST00000466872 CDCA5Q96FF9 252 aa11.9□□□□□ -0.5
C9orf135-202ENST00000466872 MRIQ9BWK5 157 aa11.9□□□□□ -0.5
C9orf135-202ENST00000466872 HMG20BQ9P0W2 317 aa11.9□□□□□ -0.5
C9orf135-202ENST00000466872 TTF2Q9UNY4 1162 aaKnown RBP11.9□□□□□ -0.5
C9orf135-202ENST00000466872 SUGT1Q9Y2Z0 365 aa11.9□□□□□ -0.5
C9orf135-202ENST00000466872 PCDHB15Q9Y5E8 787 aa11.9□□□□□ -0.5
C9orf135-202ENST00000466872 TLL2Q9Y6L7 1015 aa11.9□□□□□ -0.5
C9orf135-202ENST00000466872 NR1I2O75469 434 aa11.89□□□□□ -0.51
C9orf135-202ENST00000466872 CRKP46108 304 aa11.89□□□□□ -0.51
C9orf135-202ENST00000466872 APOBEC3HQ6NTF7 200 aaKnown RBP11.89□□□□□ -0.51
C9orf135-202ENST00000466872 SAPCD2Q86UD0 394 aa11.89□□□□□ -0.51
C9orf135-202ENST00000466872 WDR66Q8TBY9 1149 aa11.89□□□□□ -0.51
C9orf135-202ENST00000466872 RHPN1Q8TCX5 695 aa11.89□□□□□ -0.51
C9orf135-202ENST00000466872 DCPSQ96C86 337 aaKnown RBP11.89□□□□□ -0.51
C9orf135-202ENST00000466872 ZNF512BQ96KM6 892 aaPredicted RBP11.89□□□□□ -0.51
C9orf135-202ENST00000466872 CRBNQ96SW2 442 aa11.89□□□□□ -0.51
C9orf135-202ENST00000466872 HDAC9Q9UKV0 1011 aa11.89□□□□□ -0.51
C9orf135-202ENST00000466872 DENND2AQ9ULE3 1009 aa11.89□□□□□ -0.51
C9orf135-202ENST00000466872 SIPA1L1O43166 1804 aa11.88□□□□□ -0.51
C9orf135-202ENST00000466872 CELF2O95319 508 aaKnown RBP11.88□□□□□ -0.51
C9orf135-202ENST00000466872 USP46P62068 366 aa11.88□□□□□ -0.51
C9orf135-202ENST00000466872 DLGAP5Q15398 846 aa11.88□□□□□ -0.51
C9orf135-202ENST00000466872 NKX2-3Q8TAU0 364 aa11.88□□□□□ -0.51
C9orf135-202ENST00000466872 ZDHHC15Q96MV8 337 aa11.88□□□□□ -0.51
C9orf135-202ENST00000466872 GAKO14976 1311 aa11.87□□□□□ -0.51
C9orf135-202ENST00000466872 DIXDC1Q155Q3 683 aa11.87□□□□□ -0.51
C9orf135-202ENST00000466872 HHIPL2Q6UWX4 724 aa11.87□□□□□ -0.51
C9orf135-202ENST00000466872 HHIPL1Q96JK4 782 aa11.87□□□□□ -0.51
C9orf135-202ENST00000466872 TEPSINQ96N21 525 aa11.87□□□□□ -0.51
C9orf135-202ENST00000466872 NEUROD6Q96NK8 337 aa11.87□□□□□ -0.51
C9orf135-202ENST00000466872 BEGAINQ9BUH8 593 aa11.87□□□□□ -0.51
C9orf135-202ENST00000466872 CHMP4BQ9H444 224 aaKnown RBP11.87□□□□□ -0.51
C9orf135-202ENST00000466872 ZNF70Q9UC06 446 aaPredicted RBP11.87□□□□□ -0.51
C9orf135-202ENST00000466872 MKRN1Q9UHC7 482 aaKnown RBP11.87□□□□□ -0.51
C9orf135-202ENST00000466872 DAGLAQ9Y4D2 1042 aa11.87□□□□□ -0.51
C9orf135-202ENST00000466872 MYH7P12883 1935 aa11.87□□□□□ -0.51
C9orf135-202ENST00000466872 DDX60LQ5H9U9 1706 aaKnown RBP11.86□□□□□ -0.51
C9orf135-202ENST00000466872 CLRN2A0PK11 232 aa11.86□□□□□ -0.51
C9orf135-202ENST00000466872 VEGFBP49765 207 aa11.86□□□□□ -0.51
C9orf135-202ENST00000466872 PRAMEF18Q5VWM3 479 aa11.86□□□□□ -0.51
C9orf135-202ENST00000466872 ERC1Q8IUD2 1116 aa11.86□□□□□ -0.51
C9orf135-202ENST00000466872 APOBEC3FQ8IUX4 373 aaKnown RBP11.86□□□□□ -0.51
C9orf135-202ENST00000466872 SPATA5Q8NB90 893 aa11.86□□□□□ -0.51
C9orf135-202ENST00000466872 CCDC8Q9H0W5 538 aaPredicted RBP11.86□□□□□ -0.51
C9orf135-202ENST00000466872 DCTPP1Q9H773 170 aa11.86□□□□□ -0.51
C9orf135-202ENST00000466872 TDRD3Q9H7E2 651 aaKnown RBP11.86□□□□□ -0.51
C9orf135-202ENST00000466872 IL1RAPL2Q9NP60 686 aa11.86□□□□□ -0.51
C9orf135-202ENST00000466872 GNL3LQ9NVN8 582 aaKnown RBP11.86□□□□□ -0.51
C9orf135-202ENST00000466872 SLC27A5Q9Y2P5 690 aa11.86□□□□□ -0.51
C9orf135-202ENST00000466872 MAST3O60307 1309 aa11.86□□□□□ -0.51
C9orf135-202ENST00000466872 RPAP1Q9BWH6 1393 aaPredicted RBP11.85□□□□□ -0.51
C9orf135-202ENST00000466872 FAM155AB1AL88 458 aaPredicted RBP11.85□□□□□ -0.51
C9orf135-202ENST00000466872 HOXA2O43364 376 aa11.85□□□□□ -0.51
C9orf135-202ENST00000466872 HMMRO75330 724 aa11.85□□□□□ -0.51
C9orf135-202ENST00000466872 FRAT2O75474 233 aaPredicted RBP11.85□□□□□ -0.51
C9orf135-202ENST00000466872 CYP2E1P05181 493 aaPredicted RBP11.85□□□□□ -0.51
C9orf135-202ENST00000466872 SPIRE2Q8WWL2 714 aa11.85□□□□□ -0.51
C9orf135-202ENST00000466872 TEKT1Q969V4 418 aa11.85□□□□□ -0.51
C9orf135-202ENST00000466872 KIF1BPQ96EK5 621 aa11.85□□□□□ -0.51
C9orf135-202ENST00000466872 GBA2Q9HCG7 927 aaPredicted RBP11.85□□□□□ -0.51
C9orf135-202ENST00000466872 ATRNL1Q5VV63 1379 aa11.84□□□□□ -0.51
C9orf135-202ENST00000466872 RAB11FIP3O75154 756 aa11.84□□□□□ -0.51
C9orf135-202ENST00000466872 LDHBP07195 334 aaKnown RBP11.84□□□□□ -0.51
C9orf135-202ENST00000466872 UQCRFS1P1P0C7P4 283 aa11.84□□□□□ -0.51
C9orf135-202ENST00000466872 OS9Q13438 667 aaPredicted RBP11.84□□□□□ -0.51
C9orf135-202ENST00000466872 MAP3K11Q16584 847 aa11.84□□□□□ -0.51
C9orf135-202ENST00000466872 DEFB115Q30KQ5 88 aa11.84□□□□□ -0.51
C9orf135-202ENST00000466872 HSP90AB4PQ58FF6 505 aa11.84□□□□□ -0.51
C9orf135-202ENST00000466872 TBC1D9Q6ZT07 1266 aa11.84□□□□□ -0.51
C9orf135-202ENST00000466872 MOB2Q70IA6 237 aa11.84□□□□□ -0.51
C9orf135-202ENST00000466872 NSUN4Q96CB9 384 aaKnown RBP11.84□□□□□ -0.51
C9orf135-202ENST00000466872 THAP11Q96EK4 314 aa11.84□□□□□ -0.51
C9orf135-202ENST00000466872 DEFB129Q9H1M3 183 aa11.84□□□□□ -0.51
C9orf135-202ENST00000466872 ZNF408Q9H9D4 720 aa11.84□□□□□ -0.51
C9orf135-202ENST00000466872 PPP2R3BQ9Y5P8 575 aa11.84□□□□□ -0.51
C9orf135-202ENST00000466872 TLL1O43897 1013 aa11.83□□□□□ -0.52
C9orf135-202ENST00000466872 ZAP70P43403 619 aa11.83□□□□□ -0.52
C9orf135-202ENST00000466872 CACNB3P54284 484 aa11.83□□□□□ -0.52
C9orf135-202ENST00000466872 MECOMQ03112 1051 aa11.83□□□□□ -0.52
C9orf135-202ENST00000466872 RASA3Q14644 834 aa11.83□□□□□ -0.52
C9orf135-202ENST00000466872 FKBP1CQ5VVH2 108 aa11.83□□□□□ -0.52
C9orf135-202ENST00000466872 CYP4F22Q6NT55 531 aa11.83□□□□□ -0.52
C9orf135-202ENST00000466872 CDC42EP5Q6NZY7 148 aa11.83□□□□□ -0.52
C9orf135-202ENST00000466872 AACSQ86V21 672 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms