RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 CALCOCO2Q13137 446 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 ZSCAN23Q3MJ62 389 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 G2E3Q7L622 706 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 RPUSD2Q8IZ73 545 aaKnown RBP9.75□□□□□ -0.85
HPS4-209ENST00000466781 GSDMBQ8TAX9 411 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 ATP7BP35670 1465 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 AFF2P51816 1311 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 SDSP20132 328 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 SEPT12Q8IYM1 358 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 VPS52Q8N1B4 723 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 AFAP1L2Q8N4X5 818 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 CCDC110Q8TBZ0 833 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 TNNC1P63316 161 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 ERCC6LQ2NKX8 1250 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 CCDC125Q86Z20 511 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 ESYT1Q9BSJ8 1104 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 AZI2Q9H6S1 392 aa9.75□□□□□ -0.85
HPS4-209ENST00000466781 GPR161Q8N6U8 529 aaKnown RBP9.74□□□□□ -0.85
HPS4-209ENST00000466781 NOX5Q96PH1 765 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 PPIP5K2O43314 1243 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 ATP5DP30049 168 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 HAUS3Q68CZ6 603 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 LEO1Q8WVC0 666 aaPredicted RBP9.74□□□□□ -0.85
HPS4-209ENST00000466781 DNAI1Q9UI46 699 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 NOC2LQ9Y3T9 749 aaKnown RBP9.74□□□□□ -0.85
HPS4-209ENST00000466781 SYNMO15061 1565 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 ADGRB3O60242 1522 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 PUM3Q15397 648 aaKnown RBP9.74□□□□□ -0.85
HPS4-209ENST00000466781 CLUL1Q15846 466 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 LETM2Q2VYF4 491 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 ZNF594Q96JF6 807 aaPredicted RBP9.74□□□□□ -0.85
HPS4-209ENST00000466781 FAM184BQ9ULE4 1060 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 PRDM15P57071 1507 aaPredicted RBP9.74□□□□□ -0.85
HPS4-209ENST00000466781 RIOK3O14730 519 aaKnown RBP9.74□□□□□ -0.85
HPS4-209ENST00000466781 GIPC1O14908 333 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 CIB2O75838 187 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 HOXB7P09629 217 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 TNFAIP3P21580 790 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 PPP1R2P41236 205 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 APOBRQ0VD83 1088 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 CCDC121Q6ZUS5 278 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 FCHSD1Q86WN1 690 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 HACE1Q8IYU2 909 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 IQGAP3Q86VI3 1631 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 TTC41PQ6P2S7 1318 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 KAT6BQ8WYB5 2073 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 DNM2P50570 870 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 SATB1Q01826 763 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 ITIH3Q06033 890 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 SETDB1Q15047 1291 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 BRINP3Q76B58 766 aa9.74□□□□□ -0.85
HPS4-209ENST00000466781 STX17P56962 302 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 KIF22Q14807 665 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 IFT81Q8WYA0 676 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 TRERF1Q96PN7 1200 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 ARFGAP3Q9NP61 516 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 CTNND2Q9UQB3 1225 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 GINS2Q9Y248 185 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 PCDHB15Q9Y5E8 787 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 CAMSAP1Q5T5Y3 1602 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 H7C1D1 291 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 SPOPO43791 374 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 CCNT1O60563 726 aaKnown RBP9.73□□□□□ -0.85
HPS4-209ENST00000466781 SKILP12757 684 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 ZYXQ15942 572 aaKnown RBP9.73□□□□□ -0.85
HPS4-209ENST00000466781 VWA3BQ502W6 1294 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 PPP1R9BQ96SB3 815 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 GUCA1BQ9UMX6 200 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 RIMS1Q86UR5 1692 aaKnown RBP9.73□□□□□ -0.85
HPS4-209ENST00000466781 SPHKAPQ2M3C7 1700 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.73□□□□□ -0.85
HPS4-209ENST00000466781 ARHGEF35A5YM69 484 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 BRAPQ7Z569 592 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 KLHDC4Q8TBB5 520 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 PPANQ9NQ55 473 aaKnown RBP9.73□□□□□ -0.85
HPS4-209ENST00000466781 PTPRTO14522 1441 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 F13A1P00488 732 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 UBLCP1Q8WVY7 318 aaPredicted RBP9.73□□□□□ -0.85
HPS4-209ENST00000466781 ZFP91Q96JP5 570 aaPredicted RBP9.73□□□□□ -0.85
HPS4-209ENST00000466781 ANKARQ7Z5J8 1434 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 MBD4O95243 580 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 PLCD1P51178 756 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 PDE1AP54750 535 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 EP400NLQ6ZTU2 488 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 USP48Q86UV5 1035 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 GPATCH11Q8N954 259 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 IQUBQ8NA54 791 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 CCDC26Q8TAB7 109 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 ZKSCAN3Q9BRR0 538 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 DNAJC25Q9H1X3 360 aa9.73□□□□□ -0.85
HPS4-209ENST00000466781 DDX39AO00148 427 aaKnown RBP9.72□□□□□ -0.85
HPS4-209ENST00000466781 PRKG1Q13976 671 aa9.72□□□□□ -0.85
HPS4-209ENST00000466781 SRGAP1Q7Z6B7 1085 aa9.72□□□□□ -0.85
HPS4-209ENST00000466781 GLT8D2Q9H1C3 349 aa9.72□□□□□ -0.85
HPS4-209ENST00000466781 SLC5A4Q9NY91 659 aa9.72□□□□□ -0.85
HPS4-209ENST00000466781 SAMD15Q9P1V8 674 aa9.72□□□□□ -0.85
HPS4-209ENST00000466781 VAMP4O75379 141 aa9.72□□□□□ -0.85
HPS4-209ENST00000466781 TAF5LO75529 589 aa9.72□□□□□ -0.85
HPS4-209ENST00000466781 NCAPH2Q6IBW4 605 aa9.72□□□□□ -0.85
HPS4-209ENST00000466781 NLGN1Q8N2Q7 840 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms