RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 APPP05067 770 aa11.84□□□□□ -0.51
PMF1-204ENST00000466489 TERF1P54274 439 aa11.84□□□□□ -0.51
PMF1-204ENST00000466489 HUNKP57058 714 aa11.84□□□□□ -0.51
PMF1-204ENST00000466489 CSPP1Q1MSJ5 1256 aa11.84□□□□□ -0.51
PMF1-204ENST00000466489 ZMYM1Q5SVZ6 1142 aa11.84□□□□□ -0.51
PMF1-204ENST00000466489 NBPF12Q5TAG4 269 aaPredicted RBP11.84□□□□□ -0.51
PMF1-204ENST00000466489 PRAMEF18Q5VWM3 479 aa11.84□□□□□ -0.51
PMF1-204ENST00000466489 TTC6Q86TZ1 520 aa11.84□□□□□ -0.51
PMF1-204ENST00000466489 LCORLQ8N3X6 602 aa11.84□□□□□ -0.51
PMF1-204ENST00000466489 CRACR2BQ8N4Y2 399 aaPredicted RBP11.84□□□□□ -0.51
PMF1-204ENST00000466489 TNPO1Q92973 898 aaKnown RBP11.84□□□□□ -0.51
PMF1-204ENST00000466489 ZNF341Q9BYN7 854 aa11.84□□□□□ -0.51
PMF1-204ENST00000466489 PI4KBQ9UBF8 816 aa11.84□□□□□ -0.51
PMF1-204ENST00000466489 BRPF3Q9ULD4 1205 aa11.84□□□□□ -0.51
PMF1-204ENST00000466489 ANGEL1Q9UNK9 670 aaKnown RBP11.84□□□□□ -0.51
PMF1-204ENST00000466489 CSADQ9Y600 493 aa11.84□□□□□ -0.51
PMF1-204ENST00000466489 SLC4A4Q9Y6R1 1079 aa11.84□□□□□ -0.51
PMF1-204ENST00000466489 LAMB1P07942 1786 aa11.83□□□□□ -0.52
PMF1-204ENST00000466489 LETM1O95202 739 aaPredicted RBP11.83□□□□□ -0.52
PMF1-204ENST00000466489 POLR3DP05423 398 aaPredicted RBP11.83□□□□□ -0.52
PMF1-204ENST00000466489 SDSP20132 328 aa11.83□□□□□ -0.52
PMF1-204ENST00000466489 ECE1P42892 770 aa11.83□□□□□ -0.52
PMF1-204ENST00000466489 PRKG1Q13976 671 aa11.83□□□□□ -0.52
PMF1-204ENST00000466489 MCMDC2Q4G0Z9 681 aa11.83□□□□□ -0.52
PMF1-204ENST00000466489 CST9Q5W186 159 aa11.83□□□□□ -0.52
PMF1-204ENST00000466489 GIMAP6Q6P9H5 292 aa11.83□□□□□ -0.52
PMF1-204ENST00000466489 HHIPL1Q96JK4 782 aa11.83□□□□□ -0.52
PMF1-204ENST00000466489 TEPSINQ96N21 525 aa11.83□□□□□ -0.52
PMF1-204ENST00000466489 PUS7LQ9H0K6 701 aaKnown RBP11.83□□□□□ -0.52
PMF1-204ENST00000466489 MCM9Q9NXL9 1143 aa11.83□□□□□ -0.52
PMF1-204ENST00000466489 HERC5Q9UII4 1024 aaKnown RBP11.83□□□□□ -0.52
PMF1-204ENST00000466489 TAOK2Q9UL54 1235 aa11.83□□□□□ -0.52
PMF1-204ENST00000466489 ATP6V1DQ9Y5K8 247 aa11.83□□□□□ -0.52
PMF1-204ENST00000466489 TLL2Q9Y6L7 1015 aa11.83□□□□□ -0.52
PMF1-204ENST00000466489 XRCC6P12956 609 aaKnown RBP eCLIP11.82□□□□□ -0.52
PMF1-204ENST00000466489 TDO2P48775 406 aa11.82□□□□□ -0.52
PMF1-204ENST00000466489 FMR1Q06787 632 aaKnown RBP eCLIP11.82□□□□□ -0.52
PMF1-204ENST00000466489 DEFB115Q30KQ5 88 aa11.82□□□□□ -0.52
PMF1-204ENST00000466489 SAPCD2Q86UD0 394 aa11.82□□□□□ -0.52
PMF1-204ENST00000466489 FOXP4Q8IVH2 680 aaPredicted RBP11.82□□□□□ -0.52
PMF1-204ENST00000466489 ANKRD13AQ8IZ07 590 aa11.82□□□□□ -0.52
PMF1-204ENST00000466489 SDR42E1Q8WUS8 393 aa11.82□□□□□ -0.52
PMF1-204ENST00000466489 OSBP2Q969R2 916 aa11.82□□□□□ -0.52
PMF1-204ENST00000466489 IL17RAQ96F46 866 aa11.82□□□□□ -0.52
PMF1-204ENST00000466489 STRBPQ96SI9 672 aaKnown RBP11.82□□□□□ -0.52
PMF1-204ENST00000466489 USP26Q9BXU7 913 aa11.82□□□□□ -0.52
PMF1-204ENST00000466489 DDX4Q9NQI0 724 aaKnown RBP11.82□□□□□ -0.52
PMF1-204ENST00000466489 ARPP21Q9UBL0 812 aaPredicted RBP11.82□□□□□ -0.52
PMF1-204ENST00000466489 RAD50Q92878 1312 aa11.82□□□□□ -0.52
PMF1-204ENST00000466489 OTOFQ9HC10 1997 aa11.81□□□□□ -0.52
PMF1-204ENST00000466489 DDX60LQ5H9U9 1706 aaKnown RBP11.81□□□□□ -0.52
PMF1-204ENST00000466489 M0R2C6 588 aa11.81□□□□□ -0.52
PMF1-204ENST00000466489 SLC3A2P08195 630 aaKnown RBP11.81□□□□□ -0.52
PMF1-204ENST00000466489 GSPT1P15170 499 aaKnown RBP11.81□□□□□ -0.52
PMF1-204ENST00000466489 NMIQ13287 307 aaPredicted RBP11.81□□□□□ -0.52
PMF1-204ENST00000466489 MAP3K11Q16584 847 aa11.81□□□□□ -0.52
PMF1-204ENST00000466489 CWC27Q6UX04 472 aaKnown RBP11.81□□□□□ -0.52
PMF1-204ENST00000466489 DLK2Q6UY11 383 aa11.81□□□□□ -0.52
PMF1-204ENST00000466489 FAM184AQ8NB25 1140 aa11.81□□□□□ -0.52
PMF1-204ENST00000466489 CCDC102AQ96A19 550 aa11.81□□□□□ -0.52
PMF1-204ENST00000466489 WRNIP1Q96S55 665 aa11.81□□□□□ -0.52
PMF1-204ENST00000466489 NAPBQ9H115 298 aa11.81□□□□□ -0.52
PMF1-204ENST00000466489 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.81□□□□□ -0.52
PMF1-204ENST00000466489 ZNF287Q9HBT7 754 aa11.81□□□□□ -0.52
PMF1-204ENST00000466489 DCP1AQ9NPI6 582 aaPredicted RBP11.81□□□□□ -0.52
PMF1-204ENST00000466489 SAP30BPQ9UHR5 308 aaKnown RBP11.81□□□□□ -0.52
PMF1-204ENST00000466489 SERPINB13Q9UIV8 391 aa11.81□□□□□ -0.52
PMF1-204ENST00000466489 PALD1Q9ULE6 856 aa11.81□□□□□ -0.52
PMF1-204ENST00000466489 CCDC171Q6TFL3 1326 aa11.81□□□□□ -0.52
PMF1-204ENST00000466489 DOCK1Q14185 1865 aa11.8□□□□□ -0.52
PMF1-204ENST00000466489 SSC5DA1L4H1 1573 aa11.8□□□□□ -0.52
PMF1-204ENST00000466489 DDTLA6NHG4 134 aaPredicted RBP11.8□□□□□ -0.52
PMF1-204ENST00000466489 RASSF10A6NK89 507 aa11.8□□□□□ -0.52
PMF1-204ENST00000466489 TBC1D12O60347 775 aa11.8□□□□□ -0.52
PMF1-204ENST00000466489 ZNF157P51786 506 aaPredicted RBP11.8□□□□□ -0.52
PMF1-204ENST00000466489 ZNF445P59923 1031 aa11.8□□□□□ -0.52
PMF1-204ENST00000466489 MAP3K9P80192 1104 aa11.8□□□□□ -0.52
PMF1-204ENST00000466489 SLFNL1Q499Z3 407 aa11.8□□□□□ -0.52
PMF1-204ENST00000466489 RGMBQ6NW40 437 aa11.8□□□□□ -0.52
PMF1-204ENST00000466489 MIGA2Q7L4E1 593 aa11.8□□□□□ -0.52
PMF1-204ENST00000466489 ZFPM1Q8IX07 1006 aa11.8□□□□□ -0.52
PMF1-204ENST00000466489 CHMP4CQ96CF2 233 aa11.8□□□□□ -0.52
PMF1-204ENST00000466489 SLC10A4Q96EP9 437 aa11.8□□□□□ -0.52
PMF1-204ENST00000466489 EHD4Q9H223 541 aa11.8□□□□□ -0.52
PMF1-204ENST00000466489 PICK1Q9NRD5 415 aa11.8□□□□□ -0.52
PMF1-204ENST00000466489 DDX49Q9Y6V7 483 aaKnown RBP11.8□□□□□ -0.52
PMF1-204ENST00000466489 ATAD5Q96QE3 1844 aa11.8□□□□□ -0.52
PMF1-204ENST00000466489 A0A0D9SFI3 127 aa11.79□□□□□ -0.52
PMF1-204ENST00000466489 PATL2C9JE40 543 aaKnown RBP11.79□□□□□ -0.52
PMF1-204ENST00000466489 UBE2Q2LH0YL09 131 aa11.79□□□□□ -0.52
PMF1-204ENST00000466489 CHGBP05060 677 aa11.79□□□□□ -0.52
PMF1-204ENST00000466489 GRM1Q13255 1194 aa11.79□□□□□ -0.52
PMF1-204ENST00000466489 KIAA1211Q6ZU35 1233 aa11.79□□□□□ -0.52
PMF1-204ENST00000466489 CDAN1Q8IWY9 1227 aa11.79□□□□□ -0.52
PMF1-204ENST00000466489 KLRG1Q96E93 195 aa11.79□□□□□ -0.52
PMF1-204ENST00000466489 FAM227BQ96M60 508 aa11.79□□□□□ -0.52
PMF1-204ENST00000466489 SEC62Q99442 399 aaKnown RBP11.79□□□□□ -0.52
PMF1-204ENST00000466489 SWAP70Q9UH65 585 aa11.79□□□□□ -0.52
PMF1-204ENST00000466489 MKRN1Q9UHC7 482 aaKnown RBP11.79□□□□□ -0.52
PMF1-204ENST00000466489 USP17L12C9JPN9 530 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms