RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 CCL5P13501 91 aa25.37■■□□□ 1.65
COL6A1-203ENST00000466285 FCGRTP55899 365 aa25.37■■□□□ 1.65
COL6A1-203ENST00000466285 FASTKD5Q7L8L6 764 aaKnown RBP25.37■■□□□ 1.65
COL6A1-203ENST00000466285 TEX11Q8IYF3 940 aa25.37■■□□□ 1.65
COL6A1-203ENST00000466285 AATFQ9NY61 560 aaKnown RBP eCLIP25.37■■□□□ 1.65
COL6A1-203ENST00000466285 TBC1D12O60347 775 aa25.36■■□□□ 1.65
COL6A1-203ENST00000466285 NPM3O75607 178 aaKnown RBP25.36■■□□□ 1.65
COL6A1-203ENST00000466285 CYP2E1P05181 493 aaPredicted RBP25.36■■□□□ 1.65
COL6A1-203ENST00000466285 ELNP15502 786 aa25.36■■□□□ 1.65
COL6A1-203ENST00000466285 PIH1D3Q9NQM4 214 aaKnown RBP25.36■■□□□ 1.65
COL6A1-203ENST00000466285 AGTPBP1Q9UPW5 1226 aa25.36■■□□□ 1.65
COL6A1-203ENST00000466285 DDX60LQ5H9U9 1706 aaKnown RBP25.36■■□□□ 1.65
COL6A1-203ENST00000466285 MYH1P12882 1939 aa25.35■■□□□ 1.65
COL6A1-203ENST00000466285 UNC93B1Q9H1C4 597 aa25.35■■□□□ 1.65
COL6A1-203ENST00000466285 LRP2BPQ9P2M1 347 aa25.35■■□□□ 1.65
COL6A1-203ENST00000466285 DBNLQ9UJU6 430 aaKnown RBP25.35■■□□□ 1.65
COL6A1-203ENST00000466285 NDUFB9Q9Y6M9 179 aa25.35■■□□□ 1.65
COL6A1-203ENST00000466285 TRIOBPQ9H2D6 2365 aa25.35■■□□□ 1.65
COL6A1-203ENST00000466285 RANBP2P49792 3224 aaKnown RBP25.34■■□□□ 1.65
COL6A1-203ENST00000466285 H0YGN5 161 aa25.34■■□□□ 1.65
COL6A1-203ENST00000466285 PEX10O60683 326 aa25.34■■□□□ 1.65
COL6A1-203ENST00000466285 GSTO1P78417 241 aa25.34■■□□□ 1.65
COL6A1-203ENST00000466285 HNRNPUQ00839 825 aaKnown RBP eCLIP25.34■■□□□ 1.65
COL6A1-203ENST00000466285 SPP2Q13103 211 aa25.34■■□□□ 1.65
COL6A1-203ENST00000466285 TTC39AQ5SRH9 613 aa25.34■■□□□ 1.65
COL6A1-203ENST00000466285 UBE2Q1Q7Z7E8 422 aa25.34■■□□□ 1.65
COL6A1-203ENST00000466285 ANKRD13CQ8N6S4 541 aa25.34■■□□□ 1.65
COL6A1-203ENST00000466285 SLC45A1Q9Y2W3 748 aa25.34■■□□□ 1.65
COL6A1-203ENST00000466285 UQCRFS1P1P0C7P4 283 aa25.33■■□□□ 1.65
COL6A1-203ENST00000466285 ZAP70P43403 619 aa25.33■■□□□ 1.65
COL6A1-203ENST00000466285 FLT3LGP49771 235 aa25.33■■□□□ 1.65
COL6A1-203ENST00000466285 HMGCS2P54868 508 aa25.33■■□□□ 1.65
COL6A1-203ENST00000466285 ATP8B2P98198 1209 aa25.33■■□□□ 1.65
COL6A1-203ENST00000466285 MAPKAPK5Q8IW41 473 aa25.33■■□□□ 1.65
COL6A1-203ENST00000466285 MIER1Q8N108 512 aa25.33■■□□□ 1.65
COL6A1-203ENST00000466285 SMCR8Q8TEV9 937 aaPredicted RBP25.33■■□□□ 1.65
COL6A1-203ENST00000466285 COLQQ9Y215 455 aaPredicted RBP25.33■■□□□ 1.65
COL6A1-203ENST00000466285 FLT1P17948 1338 aa25.33■■□□□ 1.64
COL6A1-203ENST00000466285 SURF6O75683 361 aaKnown RBP25.32■■□□□ 1.64
COL6A1-203ENST00000466285 LDHCP07864 332 aa25.32■■□□□ 1.64
COL6A1-203ENST00000466285 CAP2P40123 477 aa25.32■■□□□ 1.64
COL6A1-203ENST00000466285 NAA16Q6N069 864 aaPredicted RBP25.32■■□□□ 1.64
COL6A1-203ENST00000466285 GCC1Q96CN9 775 aa25.32■■□□□ 1.64
COL6A1-203ENST00000466285 GPR108Q9NPR9 543 aa25.32■■□□□ 1.64
COL6A1-203ENST00000466285 SZT2Q5T011 3432 aa25.31■■□□□ 1.64
COL6A1-203ENST00000466285 HOXD10P28358 340 aa25.31■■□□□ 1.64
COL6A1-203ENST00000466285 DYNLL1P63167 89 aaKnown RBP25.31■■□□□ 1.64
COL6A1-203ENST00000466285 OS9Q13438 667 aaPredicted RBP25.31■■□□□ 1.64
COL6A1-203ENST00000466285 ITPRIPQ8IWB1 547 aa25.31■■□□□ 1.64
COL6A1-203ENST00000466285 CCDC8Q9H0W5 538 aaPredicted RBP25.31■■□□□ 1.64
COL6A1-203ENST00000466285 RNF208Q9H0X6 261 aa25.31■■□□□ 1.64
COL6A1-203ENST00000466285 TNPO2O14787 897 aaKnown RBP25.3■■□□□ 1.64
COL6A1-203ENST00000466285 ADCY3O60266 1144 aa25.3■■□□□ 1.64
COL6A1-203ENST00000466285 INHAP05111 366 aa25.3■■□□□ 1.64
COL6A1-203ENST00000466285 GJA8P48165 433 aa25.3■■□□□ 1.64
COL6A1-203ENST00000466285 FXR1P51114 621 aaKnown RBP eCLIP25.3■■□□□ 1.64
COL6A1-203ENST00000466285 ZNF280CQ8ND82 737 aa25.3■■□□□ 1.64
COL6A1-203ENST00000466285 TGFBRAP1Q8WUH2 860 aa25.3■■□□□ 1.64
COL6A1-203ENST00000466285 EAF2Q96CJ1 260 aaPredicted RBP25.3■■□□□ 1.64
COL6A1-203ENST00000466285 BIN2Q9UBW5 565 aaPredicted RBP25.3■■□□□ 1.64
COL6A1-203ENST00000466285 NAV1Q8NEY1 1877 aa25.3■■□□□ 1.64
COL6A1-203ENST00000466285 ZBTB7BO15156 539 aaPredicted RBP25.29■■□□□ 1.64
COL6A1-203ENST00000466285 GJB1P08034 283 aa25.29■■□□□ 1.64
COL6A1-203ENST00000466285 SLAIN1Q8ND83 568 aa25.29■■□□□ 1.64
COL6A1-203ENST00000466285 SAP30BPQ9UHR5 308 aaKnown RBP25.29■■□□□ 1.64
COL6A1-203ENST00000466285 GDF11O95390 407 aa25.28■■□□□ 1.64
COL6A1-203ENST00000466285 PROCA1Q8NCQ7 364 aaPredicted RBP25.28■■□□□ 1.64
COL6A1-203ENST00000466285 U2AF1L4Q8WU68 220 aaKnown RBP25.28■■□□□ 1.64
COL6A1-203ENST00000466285 PCDH10Q9P2E7 1040 aa25.28■■□□□ 1.64
COL6A1-203ENST00000466285 PALD1Q9ULE6 856 aa25.28■■□□□ 1.64
COL6A1-203ENST00000466285 NOP58Q9Y2X3 529 aaKnown RBP25.28■■□□□ 1.64
COL6A1-203ENST00000466285 MAP4K4O95819 1239 aaPredicted RBP25.27■■□□□ 1.64
COL6A1-203ENST00000466285 PPP4CP60510 307 aa25.27■■□□□ 1.64
COL6A1-203ENST00000466285 MTMR2Q13614 643 aa25.27■■□□□ 1.64
COL6A1-203ENST00000466285 FAM110CQ1W6H9 321 aa25.27■■□□□ 1.64
COL6A1-203ENST00000466285 CEP85Q6P2H3 762 aa25.27■■□□□ 1.64
COL6A1-203ENST00000466285 FTSJ3Q8IY81 847 aaKnown RBP25.27■■□□□ 1.64
COL6A1-203ENST00000466285 ASCC2Q9H1I8 757 aaPredicted RBP25.27■■□□□ 1.64
COL6A1-203ENST00000466285 TAOK2Q9UL54 1235 aa25.27■■□□□ 1.64
COL6A1-203ENST00000466285 CCDC158Q5M9N0 1113 aa25.26■■□□□ 1.63
COL6A1-203ENST00000466285 MIGA1Q8NAN2 632 aa25.26■■□□□ 1.63
COL6A1-203ENST00000466285 PANK1Q8TE04 598 aa25.26■■□□□ 1.63
COL6A1-203ENST00000466285 ANTXR1Q9H6X2 564 aa25.26■■□□□ 1.63
COL6A1-203ENST00000466285 HERC5Q9UII4 1024 aaKnown RBP25.26■■□□□ 1.63
COL6A1-203ENST00000466285 USP17L5A8MUK1 530 aa25.25■■□□□ 1.63
COL6A1-203ENST00000466285 TRIM32Q13049 653 aa25.25■■□□□ 1.63
COL6A1-203ENST00000466285 SH3D19Q5HYK7 790 aa25.25■■□□□ 1.63
COL6A1-203ENST00000466285 ZNF512BQ96KM6 892 aaPredicted RBP25.25■■□□□ 1.63
COL6A1-203ENST00000466285 EXOC6BQ9Y2D4 811 aa25.25■■□□□ 1.63
COL6A1-203ENST00000466285 UBXN2AP68543 259 aa25.24■■□□□ 1.63
COL6A1-203ENST00000466285 IRF5Q13568 498 aa25.24■■□□□ 1.63
COL6A1-203ENST00000466285 POTEEQ6S8J3 1075 aa25.24■■□□□ 1.63
COL6A1-203ENST00000466285 METTL16Q86W50 562 aaKnown RBP25.24■■□□□ 1.63
COL6A1-203ENST00000466285 PI4KBQ9UBF8 816 aa25.24■■□□□ 1.63
COL6A1-203ENST00000466285 FARP2O94887 1054 aaPredicted RBP25.23■■□□□ 1.63
COL6A1-203ENST00000466285 CHRDL2Q6WN34 429 aa25.23■■□□□ 1.63
COL6A1-203ENST00000466285 NOL10Q9BSC4 688 aaKnown RBP25.23■■□□□ 1.63
COL6A1-203ENST00000466285 PNMA3Q9UL41 463 aa25.23■■□□□ 1.63
COL6A1-203ENST00000466285 ZBTB21Q9ULJ3 1066 aa25.23■■□□□ 1.63
COL6A1-203ENST00000466285 CYP7A1P22680 504 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms