RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 RASA1P20936 1047 aa8.2□□□□□ -1.1
NCL-208ENST00000466274 ADH7P40394 386 aa8.2□□□□□ -1.1
NCL-208ENST00000466274 GATA4P43694 442 aa8.2□□□□□ -1.1
NCL-208ENST00000466274 TYRO3Q06418 890 aa8.2□□□□□ -1.1
NCL-208ENST00000466274 MAP1SQ66K74 1059 aaPredicted RBP8.2□□□□□ -1.1
NCL-208ENST00000466274 ALDH16A1Q8IZ83 802 aa8.2□□□□□ -1.1
NCL-208ENST00000466274 IFNL2Q8IZJ0 200 aa8.2□□□□□ -1.1
NCL-208ENST00000466274 MICALL1Q8N3F8 863 aa8.2□□□□□ -1.1
NCL-208ENST00000466274 ZNF622Q969S3 477 aaKnown RBP eCLIP8.2□□□□□ -1.12e-13■■■□□ 14.9
NCL-208ENST00000466274 SEMA6BQ9H3T3 888 aa8.2□□□□□ -1.1
NCL-208ENST00000466274 SRP68Q9UHB9 627 aaKnown RBP8.2□□□□□ -1.1
NCL-208ENST00000466274 RBM19Q9Y4C8 960 aaKnown RBP8.2□□□□□ -1.1
NCL-208ENST00000466274 FAM208AQ9UK61 1670 aaKnown RBP8.2□□□□□ -1.1
NCL-208ENST00000466274 ARFGEF1Q9Y6D6 1849 aa8.19□□□□□ -1.1
NCL-208ENST00000466274 UBR3Q6ZT12 1888 aa8.19□□□□□ -1.1
NCL-208ENST00000466274 DLL1O00548 723 aa8.19□□□□□ -1.1
NCL-208ENST00000466274 LGR5O75473 907 aa8.19□□□□□ -1.1
NCL-208ENST00000466274 ITGB7P26010 798 aa8.19□□□□□ -1.1
NCL-208ENST00000466274 SCG3Q8WXD2 468 aaKnown RBP8.19□□□□□ -1.1
NCL-208ENST00000466274 GLMNQ92990 594 aa8.19□□□□□ -1.1
NCL-208ENST00000466274 PDE6BP35913 854 aa8.18□□□□□ -1.1
NCL-208ENST00000466274 CRKLP46109 303 aaKnown RBP8.18□□□□□ -1.1
NCL-208ENST00000466274 NEUROD1Q13562 356 aa8.18□□□□□ -1.1
NCL-208ENST00000466274 PRRT3Q5FWE3 981 aa8.18□□□□□ -1.1
NCL-208ENST00000466274 Q8N3U1 123 aa8.18□□□□□ -1.1
NCL-208ENST00000466274 GAS2L2Q8NHY3 880 aa8.18□□□□□ -1.1
NCL-208ENST00000466274 BHMTQ93088 406 aa8.18□□□□□ -1.1
NCL-208ENST00000466274 C2orf49Q9BVC5 232 aaPredicted RBP8.18□□□□□ -1.1
NCL-208ENST00000466274 SLC12A5Q9H2X9 1139 aa8.18□□□□□ -1.1
NCL-208ENST00000466274 MAFBQ9Y5Q3 323 aaPredicted RBP8.18□□□□□ -1.1
NCL-208ENST00000466274 PDE4DIPQ5VU43 2346 aa8.18□□□□□ -1.1
NCL-208ENST00000466274 SPDYE3A6NKU9 549 aa8.17□□□□□ -1.1
NCL-208ENST00000466274 ERVV-2B6SEH9 535 aa8.17□□□□□ -1.1
NCL-208ENST00000466274 AOC2O75106 756 aa8.17□□□□□ -1.1
NCL-208ENST00000466274 SERPINB2P05120 415 aa8.17□□□□□ -1.1
NCL-208ENST00000466274 HSP90AB1P08238 724 aaKnown RBP8.17□□□□□ -1.1
NCL-208ENST00000466274 USPL1Q5W0Q7 1092 aa8.17□□□□□ -1.1
NCL-208ENST00000466274 BTLAQ7Z6A9 289 aa8.17□□□□□ -1.1
NCL-208ENST00000466274 HHIPL1Q96JK4 782 aa8.17□□□□□ -1.1
NCL-208ENST00000466274 IGFLR1Q9H665 355 aa8.17□□□□□ -1.1
NCL-208ENST00000466274 PRDM6Q9NQX0 595 aa8.17□□□□□ -1.1
NCL-208ENST00000466274 KDRP35968 1356 aa8.17□□□□□ -1.1
NCL-208ENST00000466274 TAF1LQ8IZX4 1826 aa8.17□□□□□ -1.1
NCL-208ENST00000466274 TNRC18O15417 2968 aaPredicted RBP8.16□□□□□ -1.1
NCL-208ENST00000466274 INSRP06213 1382 aa8.16□□□□□ -1.1
NCL-208ENST00000466274 PHKG2P15735 406 aa8.16□□□□□ -1.1
NCL-208ENST00000466274 LMOD1P29536 600 aaPredicted RBP8.16□□□□□ -1.1
NCL-208ENST00000466274 SEC13P55735 322 aa8.16□□□□□ -1.1
NCL-208ENST00000466274 TBC1D8BQ0IIM8 1120 aa8.16□□□□□ -1.1
NCL-208ENST00000466274 TRIM28Q13263 835 aaKnown RBP8.16□□□□□ -1.1
NCL-208ENST00000466274 NFIXQ14938 502 aa8.16□□□□□ -1.1
NCL-208ENST00000466274 RRS1Q15050 365 aaKnown RBP8.16□□□□□ -1.1
NCL-208ENST00000466274 C20orf204Q6ZNR8 217 aa8.16□□□□□ -1.1
NCL-208ENST00000466274 BRIP1Q9BX63 1249 aa8.16□□□□□ -1.1
NCL-208ENST00000466274 NID1P14543 1247 aa8.15□□□□□ -1.1
NCL-208ENST00000466274 FBLN1P23142 703 aa8.15□□□□□ -1.1
NCL-208ENST00000466274 GRIK4Q16099 956 aa8.15□□□□□ -1.1
NCL-208ENST00000466274 HSP90AB2PQ58FF8 381 aa8.15□□□□□ -1.1
NCL-208ENST00000466274 AKAP4Q5JQC9 854 aa8.15□□□□□ -1.1
NCL-208ENST00000466274 STAG2Q8N3U4 1231 aa8.15□□□□□ -1.1
NCL-208ENST00000466274 PUS7Q96PZ0 661 aaKnown RBP8.15□□□□□ -1.1
NCL-208ENST00000466274 HINFPQ9BQA5 517 aa8.15□□□□□ -1.1
NCL-208ENST00000466274 SAGE1Q9NXZ1 904 aa8.15□□□□□ -1.1
NCL-208ENST00000466274 BRCA1P38398 1863 aaKnown RBP8.15□□□□□ -1.11
NCL-208ENST00000466274 KIF24Q5T7B8 1368 aa8.14□□□□□ -1.11
NCL-208ENST00000466274 PTCD1O75127 700 aaKnown RBP8.14□□□□□ -1.11
NCL-208ENST00000466274 CABP4P57796 275 aa8.14□□□□□ -1.11
NCL-208ENST00000466274 NOGQ13253 232 aa8.14□□□□□ -1.11
NCL-208ENST00000466274 PKN2Q16513 984 aaKnown RBP8.14□□□□□ -1.11
NCL-208ENST00000466274 CIAPIN1Q6FI81 312 aa8.14□□□□□ -1.11
NCL-208ENST00000466274 GPC2Q8N158 579 aa8.14□□□□□ -1.11
NCL-208ENST00000466274 LTN1O94822 1766 aa8.14□□□□□ -1.11
NCL-208ENST00000466274 A0A1W2PP64 1363 aa8.13□□□□□ -1.11
NCL-208ENST00000466274 FLT4P35916 1363 aa8.13□□□□□ -1.11
NCL-208ENST00000466274 RNF123Q5XPI4 1314 aa8.13□□□□□ -1.11
NCL-208ENST00000466274 NPHP1O15259 732 aa8.13□□□□□ -1.11
NCL-208ENST00000466274 CRTC2Q53ET0 693 aaPredicted RBP8.13□□□□□ -1.11
NCL-208ENST00000466274 CCDC93Q567U6 631 aa8.13□□□□□ -1.11
NCL-208ENST00000466274 CST9Q5W186 159 aa8.13□□□□□ -1.11
NCL-208ENST00000466274 STYK1Q6J9G0 422 aa8.13□□□□□ -1.11
NCL-208ENST00000466274 CTU1Q7Z7A3 348 aaKnown RBP8.13□□□□□ -1.11
NCL-208ENST00000466274 SAPCD2Q86UD0 394 aa8.13□□□□□ -1.11
NCL-208ENST00000466274 SLC17A8Q8NDX2 589 aa8.13□□□□□ -1.11
NCL-208ENST00000466274 UBE2OQ9C0C9 1292 aaKnown RBP8.13□□□□□ -1.11
NCL-208ENST00000466274 TPSG1Q9NRR2 321 aa8.13□□□□□ -1.11
NCL-208ENST00000466274 NARFQ9UHQ1 456 aa8.13□□□□□ -1.11
NCL-208ENST00000466274 SBF1O95248 1867 aa8.13□□□□□ -1.11
NCL-208ENST00000466274 VIRMAQ69YN4 1812 aaKnown RBP8.13□□□□□ -1.11
NCL-208ENST00000466274 ROCK2O75116 1388 aaKnown RBP8.12□□□□□ -1.11
NCL-208ENST00000466274 RAB3GAP2Q9H2M9 1393 aa8.12□□□□□ -1.11
NCL-208ENST00000466274 WASHC2AQ641Q2 1341 aa8.12□□□□□ -1.11
NCL-208ENST00000466274 LILRB5O75023 590 aa8.12□□□□□ -1.11
NCL-208ENST00000466274 FXR1P51114 621 aaKnown RBP eCLIP8.12□□□□□ -1.115e-8■■□□□ 12.8
NCL-208ENST00000466274 FKBP4Q02790 459 aaKnown RBP eCLIP8.12□□□□□ -1.11
NCL-208ENST00000466274 DPYDQ12882 1025 aa8.12□□□□□ -1.11
NCL-208ENST00000466274 PTK7Q13308 1070 aa8.12□□□□□ -1.11
NCL-208ENST00000466274 RSPO4Q2I0M5 234 aaPredicted RBP8.12□□□□□ -1.11
NCL-208ENST00000466274 USP50Q70EL3 339 aaPredicted RBP8.12□□□□□ -1.11
NCL-208ENST00000466274 RTKN2Q8IZC4 609 aa8.12□□□□□ -1.11
NCL-208ENST00000466274 NUDT8Q8WV74 236 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms