RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 MANSC4A6NHS7 340 aaPredicted RBP11.79□□□□□ -0.52
RTFDC1-205ENST00000466260 TBC1D8O95759 1140 aa11.79□□□□□ -0.52
RTFDC1-205ENST00000466260 ZBTB48P10074 688 aaPredicted RBP11.79□□□□□ -0.52
RTFDC1-205ENST00000466260 PLCG2P16885 1265 aa11.79□□□□□ -0.52
RTFDC1-205ENST00000466260 PIP4P2Q8N4L2 257 aa11.79□□□□□ -0.52
RTFDC1-205ENST00000466260 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.79□□□□□ -0.52
RTFDC1-205ENST00000466260 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.79□□□□□ -0.52
RTFDC1-205ENST00000466260 ATRNL1Q5VV63 1379 aa11.79□□□□□ -0.52
RTFDC1-205ENST00000466260 CCL15-CCL14A0A0B4J2E2 113 aa11.78□□□□□ -0.52
RTFDC1-205ENST00000466260 CA12O43570 354 aa11.78□□□□□ -0.52
RTFDC1-205ENST00000466260 PPP4CP60510 307 aa11.78□□□□□ -0.52
RTFDC1-205ENST00000466260 HDAC1Q13547 482 aaPredicted RBP11.78□□□□□ -0.52
RTFDC1-205ENST00000466260 CCL15Q16663 113 aa11.78□□□□□ -0.52
RTFDC1-205ENST00000466260 CCDC84Q86UT8 332 aaPredicted RBP11.78□□□□□ -0.52
RTFDC1-205ENST00000466260 TNS4Q8IZW8 715 aa11.78□□□□□ -0.52
RTFDC1-205ENST00000466260 LCORLQ8N3X6 602 aa11.78□□□□□ -0.52
RTFDC1-205ENST00000466260 GCC1Q96CN9 775 aa11.78□□□□□ -0.52
RTFDC1-205ENST00000466260 TRIM34Q9BYJ4 488 aa11.78□□□□□ -0.52
RTFDC1-205ENST00000466260 LNPKQ9C0E8 428 aa11.78□□□□□ -0.52
RTFDC1-205ENST00000466260 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.78□□□□□ -0.52
RTFDC1-205ENST00000466260 ARMT1Q9H993 441 aa11.78□□□□□ -0.52
RTFDC1-205ENST00000466260 PALD1Q9ULE6 856 aa11.78□□□□□ -0.52
RTFDC1-205ENST00000466260 COL2A1P02458 1487 aaPredicted RBP11.77□□□□□ -0.52
RTFDC1-205ENST00000466260 SPDYE5A6NIY4 337 aa11.77□□□□□ -0.53
RTFDC1-205ENST00000466260 IGF2BP3O00425 579 aaKnown RBP eCLIP11.77□□□□□ -0.53
RTFDC1-205ENST00000466260 IGHDP01880 384 aa11.77□□□□□ -0.53
RTFDC1-205ENST00000466260 ADD2P35612 726 aa11.77□□□□□ -0.53
RTFDC1-205ENST00000466260 NUBP1P53384 320 aa11.77□□□□□ -0.53
RTFDC1-205ENST00000466260 ERO1BQ86YB8 467 aa11.77□□□□□ -0.53
RTFDC1-205ENST00000466260 CRACR2BQ8N4Y2 399 aaPredicted RBP11.77□□□□□ -0.53
RTFDC1-205ENST00000466260 SDR42E1Q8WUS8 393 aa11.77□□□□□ -0.53
RTFDC1-205ENST00000466260 RWDD1Q9H446 243 aaPredicted RBP11.77□□□□□ -0.53
RTFDC1-205ENST00000466260 PRDM10Q9NQV6 1147 aa11.77□□□□□ -0.53
RTFDC1-205ENST00000466260 ZSWIM8A7E2V4 1837 aa11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 TCRBV5S4A2TA0A5A2 114 aa11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 UNCXA6NJT0 531 aa11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 IRF6O14896 467 aa11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 ERC2O15083 957 aa11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 MBD4O95243 580 aa11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 HLA-DOAP06340 250 aa11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 MX1P20591 662 aa11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 TM4SF4P48230 202 aa11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 IFNL1Q8IU54 200 aa11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 SCYL3Q8IZE3 742 aa11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 RIOK1Q9BRS2 568 aaKnown RBP11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 CRNKL1Q9BZJ0 848 aaKnown RBP11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 PICK1Q9NRD5 415 aa11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 SAGE1Q9NXZ1 904 aa11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 ZNF112Q9UJU3 913 aa11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 FARP1Q9Y4F1 1045 aaPredicted RBP11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 TTC41PQ6P2S7 1318 aa11.76□□□□□ -0.53
RTFDC1-205ENST00000466260 PRKAB2O43741 272 aa11.75□□□□□ -0.53
RTFDC1-205ENST00000466260 ECM2O94769 699 aaPredicted RBP11.75□□□□□ -0.53
RTFDC1-205ENST00000466260 GDF11O95390 407 aa11.75□□□□□ -0.53
RTFDC1-205ENST00000466260 GTF2A2P52657 109 aa11.75□□□□□ -0.53
RTFDC1-205ENST00000466260 PPIL2Q13356 520 aa11.75□□□□□ -0.53
RTFDC1-205ENST00000466260 AAMPQ13685 434 aa11.75□□□□□ -0.53
RTFDC1-205ENST00000466260 ZSCAN25Q6NSZ9 544 aa11.75□□□□□ -0.53
RTFDC1-205ENST00000466260 PI4K2BQ8TCG2 481 aa11.75□□□□□ -0.53
RTFDC1-205ENST00000466260 BRI3BPQ8WY22 251 aa11.75□□□□□ -0.53
RTFDC1-205ENST00000466260 FSD1Q9BTV5 496 aa11.75□□□□□ -0.53
RTFDC1-205ENST00000466260 R3HDMLQ9H3Y0 253 aa11.75□□□□□ -0.53
RTFDC1-205ENST00000466260 PHF20L1A8MW92 1017 aa11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 IGSF3O75054 1194 aa11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 GLRX3O76003 335 aaKnown RBP11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 POLR3DP05423 398 aaPredicted RBP11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 EVX2Q03828 476 aa11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 PPATQ06203 517 aa11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 SNAPC2Q13487 334 aa11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 RRP1BQ14684 758 aaKnown RBP11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 TAF1CQ15572 869 aaPredicted RBP11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 NOL9Q5SY16 702 aaKnown RBP11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 CERS3Q8IU89 383 aa11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 FAM43AQ8N2R8 423 aa11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 KBTBD3Q8NAB2 608 aa11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 MS4A4AQ96JQ5 239 aa11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 PTPN18Q99952 460 aa11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 DHX36Q9H2U1 1008 aaKnown RBP11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 DNAJC18Q9H819 358 aa11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 MCM9Q9NXL9 1143 aa11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 PI4KBQ9UBF8 816 aa11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 ZHX2Q9Y6X8 837 aa11.74□□□□□ -0.53
RTFDC1-205ENST00000466260 TRIM75PA6NK02 468 aa11.73□□□□□ -0.53
RTFDC1-205ENST00000466260 LOC285556D6RIA3 1793 aa11.73□□□□□ -0.53
RTFDC1-205ENST00000466260 CYP2D6P10635 497 aa11.73□□□□□ -0.53
RTFDC1-205ENST00000466260 PTPRAP18433 802 aa11.73□□□□□ -0.53
RTFDC1-205ENST00000466260 INHBEP58166 350 aa11.73□□□□□ -0.53
RTFDC1-205ENST00000466260 CRHR2Q13324 411 aa11.73□□□□□ -0.53
RTFDC1-205ENST00000466260 SHROOM1Q2M3G4 852 aaPredicted RBP11.73□□□□□ -0.53
RTFDC1-205ENST00000466260 OTUD7BQ6GQQ9 843 aa11.73□□□□□ -0.53
RTFDC1-205ENST00000466260 GADL1Q6ZQY3 521 aa11.73□□□□□ -0.53
RTFDC1-205ENST00000466260 SMC5Q8IY18 1101 aa11.73□□□□□ -0.53
RTFDC1-205ENST00000466260 SALL3Q9BXA9 1300 aa11.73□□□□□ -0.53
RTFDC1-205ENST00000466260 PUS7LQ9H0K6 701 aaKnown RBP11.73□□□□□ -0.53
RTFDC1-205ENST00000466260 HERC5Q9UII4 1024 aaKnown RBP11.73□□□□□ -0.53
RTFDC1-205ENST00000466260 SLC4A4Q9Y6R1 1079 aa11.73□□□□□ -0.53
RTFDC1-205ENST00000466260 GPR25O00155 361 aa11.72□□□□□ -0.53
RTFDC1-205ENST00000466260 TBC1D12O60347 775 aa11.72□□□□□ -0.53
RTFDC1-205ENST00000466260 CTNND1O60716 968 aaKnown RBP11.72□□□□□ -0.53
RTFDC1-205ENST00000466260 ALDH1A1P00352 501 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms