RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 SDR42E1Q8WUS8 393 aa12.33□□□□□ -0.44
CD40-204ENST00000466205 RIOK1Q9BRS2 568 aaKnown RBP12.33□□□□□ -0.44
CD40-204ENST00000466205 TRIM34Q9BYJ4 488 aa12.33□□□□□ -0.44
CD40-204ENST00000466205 MCOLN1Q9GZU1 580 aa12.33□□□□□ -0.44
CD40-204ENST00000466205 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
CD40-204ENST00000466205 ZHX2Q9Y6X8 837 aa12.33□□□□□ -0.44
CD40-204ENST00000466205 TESPA1A2RU30 521 aaPredicted RBP12.32□□□□□ -0.44
CD40-204ENST00000466205 TRIM75PA6NK02 468 aa12.32□□□□□ -0.44
CD40-204ENST00000466205 BTBD19C9JJ37 291 aa12.32□□□□□ -0.44
CD40-204ENST00000466205 NPM3O75607 178 aaKnown RBP12.32□□□□□ -0.44
CD40-204ENST00000466205 MBD4O95243 580 aa12.32□□□□□ -0.44
CD40-204ENST00000466205 GDF11O95390 407 aa12.32□□□□□ -0.44
CD40-204ENST00000466205 ALDH1A1P00352 501 aa12.32□□□□□ -0.44
CD40-204ENST00000466205 IGHDP01880 384 aa12.32□□□□□ -0.44
CD40-204ENST00000466205 HLA-DOAP06340 250 aa12.32□□□□□ -0.44
CD40-204ENST00000466205 PTPRAP18433 802 aa12.32□□□□□ -0.44
CD40-204ENST00000466205 EVX2Q03828 476 aa12.32□□□□□ -0.44
CD40-204ENST00000466205 TAF1CQ15572 869 aaPredicted RBP12.32□□□□□ -0.44
CD40-204ENST00000466205 OTUD7BQ6GQQ9 843 aa12.32□□□□□ -0.44
CD40-204ENST00000466205 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.32□□□□□ -0.44
CD40-204ENST00000466205 DNAJC18Q9H819 358 aa12.32□□□□□ -0.44
CD40-204ENST00000466205 PI4KBQ9UBF8 816 aa12.32□□□□□ -0.44
CD40-204ENST00000466205 FOCADQ5VW36 1801 aa12.32□□□□□ -0.44
CD40-204ENST00000466205 DOCK1Q14185 1865 aa12.31□□□□□ -0.44
CD40-204ENST00000466205 LAMB1P07942 1786 aa12.31□□□□□ -0.44
CD40-204ENST00000466205 PRKAB2O43741 272 aa12.31□□□□□ -0.44
CD40-204ENST00000466205 TBC1D12O60347 775 aa12.31□□□□□ -0.44
CD40-204ENST00000466205 CTNND1O60716 968 aaKnown RBP12.31□□□□□ -0.44
CD40-204ENST00000466205 CETPP11597 493 aa12.31□□□□□ -0.44
CD40-204ENST00000466205 MAP3K10Q02779 954 aa12.31□□□□□ -0.44
CD40-204ENST00000466205 HDAC1Q13547 482 aaPredicted RBP12.31□□□□□ -0.44
CD40-204ENST00000466205 LNPKQ9C0E8 428 aa12.31□□□□□ -0.44
CD40-204ENST00000466205 DHX36Q9H2U1 1008 aaKnown RBP12.31□□□□□ -0.44
CD40-204ENST00000466205 COL2A1P02458 1487 aaPredicted RBP12.31□□□□□ -0.44
CD40-204ENST00000466205 IGSF3O75054 1194 aa12.3□□□□□ -0.44
CD40-204ENST00000466205 FKTNO75072 461 aa12.3□□□□□ -0.44
CD40-204ENST00000466205 POLR3DP05423 398 aaPredicted RBP12.3□□□□□ -0.44
CD40-204ENST00000466205 CYP2D6P10635 497 aa12.3□□□□□ -0.44
CD40-204ENST00000466205 MX1P20591 662 aa12.3□□□□□ -0.44
CD40-204ENST00000466205 PLCD1P51178 756 aa12.3□□□□□ -0.44
CD40-204ENST00000466205 JAG1P78504 1218 aa12.3□□□□□ -0.44
CD40-204ENST00000466205 GADL1Q6ZQY3 521 aa12.3□□□□□ -0.44
CD40-204ENST00000466205 PI4K2BQ8TCG2 481 aa12.3□□□□□ -0.44
CD40-204ENST00000466205 GCC1Q96CN9 775 aa12.3□□□□□ -0.44
CD40-204ENST00000466205 ABHD8Q96I13 439 aa12.3□□□□□ -0.44
CD40-204ENST00000466205 CRNKL1Q9BZJ0 848 aaKnown RBP12.3□□□□□ -0.44
CD40-204ENST00000466205 PUS7LQ9H0K6 701 aaKnown RBP12.3□□□□□ -0.44
CD40-204ENST00000466205 MCM9Q9NXL9 1143 aa12.3□□□□□ -0.44
CD40-204ENST00000466205 NAV1Q8NEY1 1877 aa12.29□□□□□ -0.44
CD40-204ENST00000466205 PDHXO00330 501 aa12.29□□□□□ -0.44
CD40-204ENST00000466205 CAP2P40123 477 aa12.29□□□□□ -0.44
CD40-204ENST00000466205 CD99L2Q8TCZ2 262 aa12.29□□□□□ -0.44
CD40-204ENST00000466205 RWDD1Q9H446 243 aaPredicted RBP12.29□□□□□ -0.44
CD40-204ENST00000466205 ZFYVE28Q9HCC9 887 aa12.29□□□□□ -0.44
CD40-204ENST00000466205 HERC5Q9UII4 1024 aaKnown RBP12.29□□□□□ -0.44
CD40-204ENST00000466205 KCNH4Q9UQ05 1017 aa12.29□□□□□ -0.44
CD40-204ENST00000466205 AFG3L2Q9Y4W6 797 aa12.29□□□□□ -0.44
CD40-204ENST00000466205 ATAD5Q96QE3 1844 aa12.29□□□□□ -0.44
CD40-204ENST00000466205 TTC41PQ6P2S7 1318 aa12.29□□□□□ -0.44
CD40-204ENST00000466205 MYH1P12882 1939 aa12.29□□□□□ -0.44
CD40-204ENST00000466205 CCDC85CA6NKD9 419 aa12.28□□□□□ -0.44
CD40-204ENST00000466205 SMIM22K7EJ46 135 aa12.28□□□□□ -0.44
CD40-204ENST00000466205 ERC2O15083 957 aa12.28□□□□□ -0.44
CD40-204ENST00000466205 CYP2C8P10632 490 aa12.28□□□□□ -0.44
CD40-204ENST00000466205 SPP2Q13103 211 aa12.28□□□□□ -0.44
CD40-204ENST00000466205 MOGSQ13724 837 aa12.28□□□□□ -0.44
CD40-204ENST00000466205 UBE3CQ15386 1083 aa12.28□□□□□ -0.44
CD40-204ENST00000466205 ZSCAN25Q6NSZ9 544 aa12.28□□□□□ -0.44
CD40-204ENST00000466205 CTU1Q7Z7A3 348 aaKnown RBP12.28□□□□□ -0.44
CD40-204ENST00000466205 CERS3Q8IU89 383 aa12.28□□□□□ -0.44
CD40-204ENST00000466205 FOXP4Q8IVH2 680 aaPredicted RBP12.28□□□□□ -0.44
CD40-204ENST00000466205 STK11IPQ8N1F8 1099 aa12.28□□□□□ -0.44
CD40-204ENST00000466205 KBTBD3Q8NAB2 608 aa12.28□□□□□ -0.44
CD40-204ENST00000466205 FSD1Q9BTV5 496 aa12.28□□□□□ -0.44
CD40-204ENST00000466205 CFHR5Q9BXR6 569 aa12.28□□□□□ -0.44
CD40-204ENST00000466205 DCP1AQ9NPI6 582 aaPredicted RBP12.28□□□□□ -0.44
CD40-204ENST00000466205 CPA4Q9UI42 421 aa12.28□□□□□ -0.44
CD40-204ENST00000466205 SLC4A4Q9Y6R1 1079 aa12.28□□□□□ -0.44
CD40-204ENST00000466205 CYP2D7A0A087X1C5 515 aa12.27□□□□□ -0.45
CD40-204ENST00000466205 A0A0G2JLL6 359 aaPredicted RBP12.27□□□□□ -0.45
CD40-204ENST00000466205 M0R2C6 588 aa12.27□□□□□ -0.45
CD40-204ENST00000466205 CXCL11O14625 94 aa12.27□□□□□ -0.45
CD40-204ENST00000466205 GLRX3O76003 335 aaKnown RBP12.27□□□□□ -0.45
CD40-204ENST00000466205 CAP1Q01518 475 aa12.27□□□□□ -0.45
CD40-204ENST00000466205 GPAT2Q6NUI2 795 aa12.27□□□□□ -0.45
CD40-204ENST00000466205 PRRT2Q7Z6L0 340 aaPredicted RBP12.27□□□□□ -0.45
CD40-204ENST00000466205 TTC6Q86TZ1 520 aa12.27□□□□□ -0.45
CD40-204ENST00000466205 SLC44A5Q8NCS7 719 aa12.27□□□□□ -0.45
CD40-204ENST00000466205 OSBP2Q969R2 916 aa12.27□□□□□ -0.45
CD40-204ENST00000466205 DYNLL2Q96FJ2 89 aa12.27□□□□□ -0.45
CD40-204ENST00000466205 SEC62Q99442 399 aaKnown RBP12.27□□□□□ -0.45
CD40-204ENST00000466205 SERPINB13Q9UIV8 391 aa12.27□□□□□ -0.45
CD40-204ENST00000466205 TRIM17Q9Y577 477 aa12.27□□□□□ -0.45
CD40-204ENST00000466205 DDX60LQ5H9U9 1706 aaKnown RBP12.27□□□□□ -0.45
CD40-204ENST00000466205 SALL3Q9BXA9 1300 aa12.27□□□□□ -0.45
CD40-204ENST00000466205 PHIPQ8WWQ0 1821 aa12.27□□□□□ -0.45
CD40-204ENST00000466205 MYH7P12883 1935 aa12.27□□□□□ -0.45
CD40-204ENST00000466205 USP17L5A8MUK1 530 aa12.26□□□□□ -0.45
CD40-204ENST00000466205 RNF113AO15541 343 aaKnown RBP12.26□□□□□ -0.45
CD40-204ENST00000466205 GH2P01242 217 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms