RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 KIF20AO95235 890 aa14.67□□□□□ -0.06
ARHGEF3-204ENST00000465659 GABPB1Q06547 395 aaPredicted RBP14.67□□□□□ -0.06
ARHGEF3-204ENST00000465659 CFAP100Q494V2 611 aa14.67□□□□□ -0.06
ARHGEF3-204ENST00000465659 TRIM22Q8IYM9 498 aa14.67□□□□□ -0.06
ARHGEF3-204ENST00000465659 TMTC2Q8N394 836 aa14.67□□□□□ -0.06
ARHGEF3-204ENST00000465659 FANCLQ9NW38 375 aa14.67□□□□□ -0.06
ARHGEF3-204ENST00000465659 FBXO2Q9UK22 296 aaPredicted RBP14.67□□□□□ -0.06
ARHGEF3-204ENST00000465659 BTBD18B2RXH4 712 aa14.67□□□□□ -0.06
ARHGEF3-204ENST00000465659 UBE2Q2LH0YL09 131 aa14.67□□□□□ -0.06
ARHGEF3-204ENST00000465659 SARSP49591 514 aaKnown RBP14.67□□□□□ -0.06
ARHGEF3-204ENST00000465659 SART3Q15020 963 aaKnown RBP14.67□□□□□ -0.06
ARHGEF3-204ENST00000465659 RTN1Q16799 776 aa14.67□□□□□ -0.06
ARHGEF3-204ENST00000465659 FBXO38Q6PIJ6 1188 aa14.67□□□□□ -0.06
ARHGEF3-204ENST00000465659 NACAP1Q9BZK3 213 aa14.67□□□□□ -0.06
ARHGEF3-204ENST00000465659 ARMT1Q9H993 441 aa14.67□□□□□ -0.06
ARHGEF3-204ENST00000465659 PLCH1Q4KWH8 1693 aa14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 CCDC196A0A1B0GTZ2 297 aa14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 TBX2Q13207 712 aaPredicted RBP14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 DZIP3Q86Y13 1208 aaKnown RBP14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 DIS3L2Q8IYB7 885 aaKnown RBP14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 MLKLQ8NB16 471 aa14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 DEXIO95424 95 aa14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 TOP1P11387 765 aaKnown RBP14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 H2AFXP16104 143 aaPredicted RBP14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 GUCY1A2P33402 732 aa14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 POSTNQ15063 836 aa14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 TRIM65Q6PJ69 517 aa14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 CRACR2BQ8N4Y2 399 aaPredicted RBP14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 TRIML1Q8N9V2 468 aa14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 HELBQ8NG08 1087 aaPredicted RBP14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 INTS13Q9NVM9 706 aa14.66□□□□□ -0.06
ARHGEF3-204ENST00000465659 ZNF18P17022 549 aa14.65□□□□□ -0.06
ARHGEF3-204ENST00000465659 PDE4BQ07343 736 aa14.65□□□□□ -0.06
ARHGEF3-204ENST00000465659 WTAPQ15007 396 aa14.65□□□□□ -0.06
ARHGEF3-204ENST00000465659 TMEM139Q8IV31 216 aa14.65□□□□□ -0.06
ARHGEF3-204ENST00000465659 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.65□□□□□ -0.06
ARHGEF3-204ENST00000465659 MAN1B1Q9UKM7 699 aa14.65□□□□□ -0.06
ARHGEF3-204ENST00000465659 V9GYY5 206 aaPredicted RBP14.65□□□□□ -0.06
ARHGEF3-204ENST00000465659 REXO1L1PQ8IX06 675 aa14.65□□□□□ -0.06
ARHGEF3-204ENST00000465659 KRT222Q8N1A0 295 aa14.65□□□□□ -0.06
ARHGEF3-204ENST00000465659 ENOX1Q8TC92 643 aaKnown RBP14.65□□□□□ -0.06
ARHGEF3-204ENST00000465659 RNF41Q9H4P4 317 aaPredicted RBP14.65□□□□□ -0.06
ARHGEF3-204ENST00000465659 DACH1Q9UI36 760 aa14.65□□□□□ -0.06
ARHGEF3-204ENST00000465659 SRPRBQ9Y5M8 271 aaKnown RBP14.65□□□□□ -0.06
ARHGEF3-204ENST00000465659 RTL9Q8NET4 1388 aa14.65□□□□□ -0.06
ARHGEF3-204ENST00000465659 ARHGAP6O43182 974 aa14.64□□□□□ -0.07
ARHGEF3-204ENST00000465659 MORC3Q14149 939 aa14.64□□□□□ -0.07
ARHGEF3-204ENST00000465659 PPP2R5BQ15173 497 aa14.64□□□□□ -0.07
ARHGEF3-204ENST00000465659 KANK3Q6NY19 840 aa14.64□□□□□ -0.07
ARHGEF3-204ENST00000465659 SPATA20Q8TB22 786 aa14.64□□□□□ -0.07
ARHGEF3-204ENST00000465659 SRRTQ9BXP5 876 aaKnown RBP14.64□□□□□ -0.07
ARHGEF3-204ENST00000465659 CEP131Q9UPN4 1083 aa14.64□□□□□ -0.07
ARHGEF3-204ENST00000465659 TMEM232C9JQI7 657 aa14.64□□□□□ -0.07
ARHGEF3-204ENST00000465659 FOXN1O15353 648 aa14.64□□□□□ -0.07
ARHGEF3-204ENST00000465659 ZSCAN12O43309 604 aa14.64□□□□□ -0.07
ARHGEF3-204ENST00000465659 HOMER1Q86YM7 354 aa14.64□□□□□ -0.07
ARHGEF3-204ENST00000465659 LCORLQ8N3X6 602 aa14.64□□□□□ -0.07
ARHGEF3-204ENST00000465659 SLC4A4Q9Y6R1 1079 aa14.64□□□□□ -0.07
ARHGEF3-204ENST00000465659 COL22A1Q8NFW1 1626 aaPredicted RBP14.64□□□□□ -0.07
ARHGEF3-204ENST00000465659 LAMB2P55268 1798 aa14.64□□□□□ -0.07
ARHGEF3-204ENST00000465659 MYH6P13533 1939 aa14.64□□□□□ -0.07
ARHGEF3-204ENST00000465659 ERICH2A1L162 156 aa14.63□□□□□ -0.07
ARHGEF3-204ENST00000465659 PRKAB2O43741 272 aa14.63□□□□□ -0.07
ARHGEF3-204ENST00000465659 TDO2P48775 406 aa14.63□□□□□ -0.07
ARHGEF3-204ENST00000465659 CT47A1Q5JQC4 288 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF3-204ENST00000465659 FANCBQ8NB91 859 aa14.63□□□□□ -0.07
ARHGEF3-204ENST00000465659 KCNJ14Q9UNX9 436 aa14.63□□□□□ -0.07
ARHGEF3-204ENST00000465659 MPHOSPH8Q99549 860 aa14.63□□□□□ -0.07
ARHGEF3-204ENST00000465659 ANAPC4Q9UJX5 808 aa14.63□□□□□ -0.07
ARHGEF3-204ENST00000465659 PHLPP1O60346 1717 aa14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 GOLGA6L9A6NEM1 432 aa14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 POLR2DO15514 142 aaKnown RBP14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 ACTN4O43707 911 aaKnown RBP14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 EIF5P55010 431 aaKnown RBP14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 GRIN1Q05586 938 aa14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 ERCC6LQ2NKX8 1250 aa14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 ZNF654Q8IZM8 581 aa14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 SMARCE1Q969G3 411 aa14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 UTP14AQ9BVJ6 771 aaKnown RBP14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 DNAI1Q9UI46 699 aa14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 PCDHB6Q9Y5E3 794 aa14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 STX10O60499 249 aa14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 SUSD4Q5VX71 490 aa14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 RNF26Q9BY78 433 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 ZNF446Q9NWS9 450 aa14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 SERTAD1Q9UHV2 236 aa14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 NFE2L3Q9Y4A8 694 aa14.62□□□□□ -0.07
ARHGEF3-204ENST00000465659 BCL9LQ86UU0 1499 aa14.61□□□□□ -0.07
ARHGEF3-204ENST00000465659 ERCC5P28715 1186 aaPredicted RBP14.61□□□□□ -0.07
ARHGEF3-204ENST00000465659 FMR1Q06787 632 aaKnown RBP eCLIP14.61□□□□□ -0.07
ARHGEF3-204ENST00000465659 SPECC1Q5M775 1068 aa14.61□□□□□ -0.07
ARHGEF3-204ENST00000465659 SPECC1LQ69YQ0 1117 aa14.61□□□□□ -0.07
ARHGEF3-204ENST00000465659 NUTM2AQ8IVF1 878 aaPredicted RBP14.61□□□□□ -0.07
ARHGEF3-204ENST00000465659 BTG4Q9NY30 223 aa14.61□□□□□ -0.07
ARHGEF3-204ENST00000465659 PPP2R2CQ9Y2T4 447 aa14.61□□□□□ -0.07
ARHGEF3-204ENST00000465659 COL14A1Q05707 1796 aaKnown RBP14.61□□□□□ -0.07
ARHGEF3-204ENST00000465659 RREB1Q92766 1687 aa14.61□□□□□ -0.07
ARHGEF3-204ENST00000465659 PRR29P0C7W0 189 aa14.61□□□□□ -0.07
ARHGEF3-204ENST00000465659 PPARAQ07869 468 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms