RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 DCAF16Q9NXF7 216 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 KCTD5Q9NXV2 234 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 AATFQ9NY61 560 aaKnown RBP eCLIP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TUBA8Q9NY65 449 aaPredicted RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 EIF2AK3Q9NZJ5 1116 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 DKK3Q9UBP4 350 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 VTI1BQ9UEU0 232 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 STK39Q9UEW8 545 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 PFDN2Q9UHV9 154 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 DMGDHQ9UI17 866 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 DNAI1Q9UI46 699 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 HOOK1Q9UJC3 728 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 MOSPD1Q9UJG1 213 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TSKSQ9UJT2 592 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 CROTQ9UKG9 612 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 GTF3C4Q9UKN8 822 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 DSEQ9UL01 958 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 MTUS1Q9ULD2 1270 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 MKL2Q9ULH7 1088 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 PAIP2BQ9ULR5 123 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 CEP131Q9UPN4 1083 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TRPC6Q9Y210 931 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 NUDCQ9Y266 331 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 CARD8Q9Y2G2 431 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 WDR37Q9Y2I8 494 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 EPB41L3Q9Y2J2 1087 aaPredicted RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 LUC7L2Q9Y383 392 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 C2CD2Q9Y426 696 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 SPO11Q9Y5K1 396 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 COL4A3BPQ9Y5P4 624 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 CAPN7Q9Y6W3 813 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 SETD1BQ9UPS6 1966 aaKnown RBP1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 VIRMAQ69YN4 1812 aaKnown RBP1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 EIF4G1Q04637 1599 aaKnown RBP1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 SENP3-EIF4A1A0A087X0R7 540 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 hCG_1642624A0A1W2PR95 340 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 A0A1W2PRQ8 180 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 POTEFA5A3E0 1075 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 GOLGA8IPA6NC78 632 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 TRIM43BA6NCK2 446 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 A6NCN8 305 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 SYNDIG1LA6NDD5 238 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 LRRC10BA6NIK2 292 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 LRRC72A6NJI9 287 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 RASSF10A6NK89 507 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 PCP4L1A6NKN8 68 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 SPDYE3A6NKU9 549 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 GOLGA8JA6NMD2 632 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 C2orf81A6NN90 581 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 TTLL13PA6NNM8 815 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 TBKBP1A7MCY6 615 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 POM121CA8CG34 1229 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 SFI1A8K8P3 1242 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 GNAT3A8MTJ3 354 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 AKR1B15C9JRZ8 316 aaPredicted RBP1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 BHMG1C9JSJ3 638 aaPredicted RBP1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 GOLGA8TH3BQL2 631 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 GOLGA8MH3BSY2 632 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 AP3B1O00203 1094 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 FOXN3O00409 490 aaPredicted RBP1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 CPLX1O14810 134 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 CHUKO15111 745 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 ZW10O43264 779 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 MAP3K7O43318 606 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 PLIN1O60240 522 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 EVI5O60447 810 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 MGEA5O60502 916 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 BUB1BO60566 1050 aaPredicted RBP1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 TSPAN1O60635 241 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 KLHL41O60662 606 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 SNX2O60749 519 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 TMEM127O75204 238 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 SMIM24O75264 130 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 LGR5O75473 907 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 RNASEH2AO75792 299 aaKnown RBP1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 BBOX1O75936 387 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 RNF8O76064 485 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 GFPT2O94808 682 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 SEC24DO94855 1032 aaPredicted RBP1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 RTN3O95197 1032 aaPredicted RBP1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 EPN2O95208 641 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 STAMBPO95630 424 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 IL33O95760 270 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 CPP00450 1065 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 ABL1P00519 1130 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 SSBP05455 408 aaKnown RBP eCLIP1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 HNRNPCP07910 306 aaKnown RBP eCLIP1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 CLTAP09496 248 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 RHOXF2BP0C7M4 288 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 POTEIP0CG38 1075 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 POTEJP0CG39 1038 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 GOLGA8HP0CJ92 632 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 ATXN8OSP0DMR3 200 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 CCDC192P0DO97 292 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 TROVE2P10155 538 aaKnown RBP eCLIP1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 MYBL1P10243 752 aa1.01□□□□□ -2.25
RPL39P28-201ENST00000465655 IDEP14735 1019 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms