RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 USP17L7P0C7H9 530 aa9.72□□□□□ -0.85
SMC4-205ENST00000465563 CD96P40200 585 aa9.72□□□□□ -0.85
SMC4-205ENST00000465563 KCT2Q8NC54 265 aa9.72□□□□□ -0.85
SMC4-205ENST00000465563 ELMO3Q96BJ8 720 aa9.72□□□□□ -0.85
SMC4-205ENST00000465563 FRMD6Q96NE9 622 aa9.72□□□□□ -0.85
SMC4-205ENST00000465563 SNX11Q9Y5W9 270 aa9.72□□□□□ -0.85
SMC4-205ENST00000465563 IGF2BP3O00425 579 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMC4-205ENST00000465563 LDHBP07195 334 aaKnown RBP9.71□□□□□ -0.86
SMC4-205ENST00000465563 FAM214BQ7L5A3 538 aa9.71□□□□□ -0.86
SMC4-205ENST00000465563 UBE3DQ7Z6J8 389 aa9.71□□□□□ -0.86
SMC4-205ENST00000465563 PI4K2BQ8TCG2 481 aa9.71□□□□□ -0.86
SMC4-205ENST00000465563 TNKS2Q9H2K2 1166 aa9.71□□□□□ -0.86
SMC4-205ENST00000465563 RC3H2Q9HBD1 1191 aaKnown RBP9.71□□□□□ -0.86
SMC4-205ENST00000465563 ANGEL2Q5VTE6 544 aaKnown RBP9.7□□□□□ -0.86
SMC4-205ENST00000465563 SV2BQ7L1I2 683 aa9.7□□□□□ -0.86
SMC4-205ENST00000465563 MBNL3Q9NUK0 354 aaKnown RBP9.7□□□□□ -0.86
SMC4-205ENST00000465563 PATL2C9JE40 543 aaKnown RBP9.69□□□□□ -0.86
SMC4-205ENST00000465563 RNASE1P07998 156 aaKnown RBP9.69□□□□□ -0.86
SMC4-205ENST00000465563 ATG4DQ86TL0 474 aaPredicted RBP9.69□□□□□ -0.86
SMC4-205ENST00000465563 POU5F2Q8N7G0 328 aa9.69□□□□□ -0.86
SMC4-205ENST00000465563 ZNF507Q8TCN5 953 aa9.69□□□□□ -0.86
SMC4-205ENST00000465563 TTF2Q9UNY4 1162 aaKnown RBP9.69□□□□□ -0.86
SMC4-205ENST00000465563 KRTAP9-9Q9BYP9 154 aa9.68□□□□□ -0.86
SMC4-205ENST00000465563 KRTAP9-4Q9BYQ2 154 aa9.68□□□□□ -0.86
SMC4-205ENST00000465563 ADAMTS6Q9UKP5 1117 aa9.68□□□□□ -0.86
SMC4-205ENST00000465563 INPP5AQ14642 412 aa9.67□□□□□ -0.86
SMC4-205ENST00000465563 ARMCX6Q7L4S7 300 aa9.67□□□□□ -0.86
SMC4-205ENST00000465563 HDXQ7Z353 690 aa9.67□□□□□ -0.86
SMC4-205ENST00000465563 ASB11Q8WXH4 323 aa9.67□□□□□ -0.86
SMC4-205ENST00000465563 TRAIPQ9BWF2 469 aa9.67□□□□□ -0.86
SMC4-205ENST00000465563 PRAMEF27A3QJZ7 478 aa9.66□□□□□ -0.86
SMC4-205ENST00000465563 GNAT3A8MTJ3 354 aa9.66□□□□□ -0.86
SMC4-205ENST00000465563 LRIG2O94898 1065 aa9.66□□□□□ -0.86
SMC4-205ENST00000465563 EIF4BP23588 611 aaKnown RBP9.66□□□□□ -0.86
SMC4-205ENST00000465563 GNA15P30679 374 aa9.66□□□□□ -0.86
SMC4-205ENST00000465563 PTPN11Q06124 597 aaPredicted RBP9.66□□□□□ -0.86
SMC4-205ENST00000465563 LRFN4Q6PJG9 635 aa9.66□□□□□ -0.86
SMC4-205ENST00000465563 CYFIP1Q7L576 1253 aa9.66□□□□□ -0.86
SMC4-205ENST00000465563 SPACA3Q8IXA5 215 aa9.66□□□□□ -0.86
SMC4-205ENST00000465563 EOMESO95936 686 aa9.65□□□□□ -0.86
SMC4-205ENST00000465563 TTBK2Q6IQ55 1244 aa9.65□□□□□ -0.86
SMC4-205ENST00000465563 SLC23A3Q6PIS1 610 aa9.65□□□□□ -0.86
SMC4-205ENST00000465563 LRRN4CLQ8ND94 238 aa9.65□□□□□ -0.86
SMC4-205ENST00000465563 PLPPR2Q96GM1 343 aa9.65□□□□□ -0.86
SMC4-205ENST00000465563 PRDM5Q9NQX1 630 aaPredicted RBP9.65□□□□□ -0.86
SMC4-205ENST00000465563 PRPF40AO75400 957 aaKnown RBP9.64□□□□□ -0.87
SMC4-205ENST00000465563 IKZF1Q13422 519 aa9.64□□□□□ -0.87
SMC4-205ENST00000465563 NKPD1Q17RQ9 610 aa9.64□□□□□ -0.87
SMC4-205ENST00000465563 GAL3ST3Q96A11 431 aa9.64□□□□□ -0.87
SMC4-205ENST00000465563 MAPK8IP1Q9UQF2 711 aa9.64□□□□□ -0.87
SMC4-205ENST00000465563 CARMIL2Q6F5E8 1435 aa9.64□□□□□ -0.87
SMC4-205ENST00000465563 FGD1P98174 961 aa9.63□□□□□ -0.87
SMC4-205ENST00000465563 FAM168AQ92567 244 aa9.63□□□□□ -0.87
SMC4-205ENST00000465563 FOXQ1Q9C009 403 aa9.63□□□□□ -0.87
SMC4-205ENST00000465563 WNT10AQ9GZT5 417 aa9.63□□□□□ -0.87
SMC4-205ENST00000465563 SNCAIPQ9Y6H5 919 aa9.63□□□□□ -0.87
SMC4-205ENST00000465563 SLITRK5O94991 958 aa9.62□□□□□ -0.87
SMC4-205ENST00000465563 CLCN7P51798 805 aa9.62□□□□□ -0.87
SMC4-205ENST00000465563 CCDC85BQ15834 202 aaPredicted RBP9.62□□□□□ -0.87
SMC4-205ENST00000465563 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.62□□□□□ -0.87
SMC4-205ENST00000465563 FBRSQ9HAH7 460 aa9.62□□□□□ -0.87
SMC4-205ENST00000465563 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.62□□□□□ -0.87
SMC4-205ENST00000465563 C8AP07357 584 aa9.61□□□□□ -0.87
SMC4-205ENST00000465563 LMNB1P20700 586 aa9.61□□□□□ -0.87
SMC4-205ENST00000465563 ETF1P62495 437 aaKnown RBP9.61□□□□□ -0.87
SMC4-205ENST00000465563 RPS26P62854 115 aaKnown RBP9.61□□□□□ -0.87
SMC4-205ENST00000465563 ZP2Q05996 745 aa9.61□□□□□ -0.87
SMC4-205ENST00000465563 FZD5Q13467 585 aa9.61□□□□□ -0.87
SMC4-205ENST00000465563 SLBPQ14493 270 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMC4-205ENST00000465563 WIPI1Q5MNZ9 446 aaPredicted RBP9.61□□□□□ -0.87
SMC4-205ENST00000465563 AK5Q9Y6K8 562 aa9.61□□□□□ -0.87
SMC4-205ENST00000465563 CAP2P40123 477 aa9.6□□□□□ -0.87
SMC4-205ENST00000465563 MFSD2AQ8NA29 543 aa9.6□□□□□ -0.87
SMC4-205ENST00000465563 PRDM7Q9NQW5 492 aa9.6□□□□□ -0.87
SMC4-205ENST00000465563 TPX2Q9ULW0 747 aaKnown RBP9.6□□□□□ -0.87
SMC4-205ENST00000465563 PITPNM2Q9BZ72 1349 aa9.59□□□□□ -0.87
SMC4-205ENST00000465563 NKG7Q16617 165 aa9.59□□□□□ -0.87
SMC4-205ENST00000465563 HID1Q8IV36 788 aa9.59□□□□□ -0.87
SMC4-205ENST00000465563 TMEM40Q8WWA1 233 aa9.59□□□□□ -0.87
SMC4-205ENST00000465563 MIPEPQ99797 713 aa9.59□□□□□ -0.87
SMC4-205ENST00000465563 DUSP9Q99956 384 aaKnown RBP9.59□□□□□ -0.87
SMC4-205ENST00000465563 FAM155AB1AL88 458 aaPredicted RBP9.58□□□□□ -0.88
SMC4-205ENST00000465563 CDK8P49336 464 aa9.58□□□□□ -0.88
SMC4-205ENST00000465563 EAPPQ56P03 285 aaPredicted RBP9.58□□□□□ -0.88
SMC4-205ENST00000465563 SFRP5Q5T4F7 317 aa9.58□□□□□ -0.88
SMC4-205ENST00000465563 FLAD1Q8NFF5 587 aa9.58□□□□□ -0.88
SMC4-205ENST00000465563 C22orf34Q6ZV56 151 aa9.57□□□□□ -0.88
SMC4-205ENST00000465563 LMCD1Q9NZU5 365 aa9.57□□□□□ -0.88
SMC4-205ENST00000465563 PCDHB5Q9Y5E4 795 aa9.57□□□□□ -0.88
SMC4-205ENST00000465563 ANKRD33BA6NCL7 494 aa9.56□□□□□ -0.88
SMC4-205ENST00000465563 ZNF865P0CJ78 1059 aaPredicted RBP9.56□□□□□ -0.88
SMC4-205ENST00000465563 GRK4P32298 578 aa9.56□□□□□ -0.88
SMC4-205ENST00000465563 SEPT6Q14141 434 aa9.56□□□□□ -0.88
SMC4-205ENST00000465563 ZNF648Q5T619 568 aaPredicted RBP9.56□□□□□ -0.88
SMC4-205ENST00000465563 ZNF746Q6NUN9 644 aaPredicted RBP9.56□□□□□ -0.88
SMC4-205ENST00000465563 AGMOQ6ZNB7 445 aa9.56□□□□□ -0.88
SMC4-205ENST00000465563 MFSD4AQ8N468 514 aa9.56□□□□□ -0.88
SMC4-205ENST00000465563 TACC3Q9Y6A5 838 aa9.56□□□□□ -0.88
SMC4-205ENST00000465563 PRR33A8MZF0 331 aa9.55□□□□□ -0.88
SMC4-205ENST00000465563 GFRA2O00451 464 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms