RNA–Protein interactions for RNA: ENST00000465415.1

CNKSR1-203, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-203ENST00000465415 LNPKQ9C0E8 428 aa15.17■□□□□ 0.02
CNKSR1-203ENST00000465415 PI4KBQ9UBF8 816 aa15.17■□□□□ 0.02
CNKSR1-203ENST00000465415 HERC5Q9UII4 1024 aaKnown RBP15.17■□□□□ 0.02
CNKSR1-203ENST00000465415 PALD1Q9ULE6 856 aa15.17■□□□□ 0.02
CNKSR1-203ENST00000465415 MYH7P12883 1935 aa15.16■□□□□ 0.02
CNKSR1-203ENST00000465415 MBD4O95243 580 aa15.16■□□□□ 0.02
CNKSR1-203ENST00000465415 CHGBP05060 677 aa15.16■□□□□ 0.02
CNKSR1-203ENST00000465415 GTF2A2P52657 109 aa15.16■□□□□ 0.02
CNKSR1-203ENST00000465415 SLC4A8Q2Y0W8 1093 aa15.16■□□□□ 0.02
CNKSR1-203ENST00000465415 IFNL1Q8IU54 200 aa15.16■□□□□ 0.02
CNKSR1-203ENST00000465415 LCORLQ8N3X6 602 aa15.16■□□□□ 0.02
CNKSR1-203ENST00000465415 CRACR2BQ8N4Y2 399 aaPredicted RBP15.16■□□□□ 0.02
CNKSR1-203ENST00000465415 TRIM34Q9BYJ4 488 aa15.16■□□□□ 0.02
CNKSR1-203ENST00000465415 ARMT1Q9H993 441 aa15.16■□□□□ 0.02
CNKSR1-203ENST00000465415 PICK1Q9NRD5 415 aa15.16■□□□□ 0.02
CNKSR1-203ENST00000465415 DDX60LQ5H9U9 1706 aaKnown RBP15.16■□□□□ 0.02
CNKSR1-203ENST00000465415 SIPA1L1O43166 1804 aa15.15■□□□□ 0.02
CNKSR1-203ENST00000465415 DOCK1Q14185 1865 aa15.15■□□□□ 0.02
CNKSR1-203ENST00000465415 NAV1Q8NEY1 1877 aa15.15■□□□□ 0.02
CNKSR1-203ENST00000465415 CCL15-CCL14A0A0B4J2E2 113 aa15.15■□□□□ 0.02
CNKSR1-203ENST00000465415 IRF6O14896 467 aa15.15■□□□□ 0.02
CNKSR1-203ENST00000465415 CTNND1O60716 968 aaKnown RBP15.15■□□□□ 0.02
CNKSR1-203ENST00000465415 ALDH1A1P00352 501 aa15.15■□□□□ 0.02
CNKSR1-203ENST00000465415 PPATQ06203 517 aa15.15■□□□□ 0.02
CNKSR1-203ENST00000465415 CCL15Q16663 113 aa15.15■□□□□ 0.02
CNKSR1-203ENST00000465415 LRRFIP1Q32MZ4 808 aaKnown RBP15.15■□□□□ 0.02
CNKSR1-203ENST00000465415 CHD1LQ86WJ1 897 aa15.15■□□□□ 0.02
CNKSR1-203ENST00000465415 MS4A4AQ96JQ5 239 aa15.15■□□□□ 0.02
CNKSR1-203ENST00000465415 STAP2Q9UGK3 403 aa15.15■□□□□ 0.02
CNKSR1-203ENST00000465415 TESPA1A2RU30 521 aaPredicted RBP15.14■□□□□ 0.01
CNKSR1-203ENST00000465415 IGF2BP3O00425 579 aaKnown RBP eCLIP15.14■□□□□ 0.01
CNKSR1-203ENST00000465415 ZFYP08048 801 aaPredicted RBP15.14■□□□□ 0.01
CNKSR1-203ENST00000465415 CETPP11597 493 aa15.14■□□□□ 0.01
CNKSR1-203ENST00000465415 PDE1AP54750 535 aa15.14■□□□□ 0.01
CNKSR1-203ENST00000465415 NUCB1Q02818 461 aa15.14■□□□□ 0.01
CNKSR1-203ENST00000465415 SNAPC2Q13487 334 aa15.14■□□□□ 0.01
CNKSR1-203ENST00000465415 OTUD7BQ6GQQ9 843 aa15.14■□□□□ 0.01
CNKSR1-203ENST00000465415 SDR42E1Q8WUS8 393 aa15.14■□□□□ 0.01
CNKSR1-203ENST00000465415 BRI3BPQ8WY22 251 aa15.14■□□□□ 0.01
CNKSR1-203ENST00000465415 FSD1Q9BTV5 496 aa15.14■□□□□ 0.01
CNKSR1-203ENST00000465415 RNF113AO15541 343 aaKnown RBP15.13■□□□□ 0.01
CNKSR1-203ENST00000465415 TBC1D8O95759 1140 aa15.13■□□□□ 0.01
CNKSR1-203ENST00000465415 PTPRAP18433 802 aa15.13■□□□□ 0.01
CNKSR1-203ENST00000465415 TTC6Q86TZ1 520 aa15.13■□□□□ 0.01
CNKSR1-203ENST00000465415 METTL16Q86W50 562 aaKnown RBP15.13■□□□□ 0.01
CNKSR1-203ENST00000465415 FOXP4Q8IVH2 680 aaPredicted RBP15.13■□□□□ 0.01
CNKSR1-203ENST00000465415 APPBP2Q92624 585 aa15.13■□□□□ 0.01
CNKSR1-203ENST00000465415 PUS7LQ9H0K6 701 aaKnown RBP15.13■□□□□ 0.01
CNKSR1-203ENST00000465415 DNAJC18Q9H819 358 aa15.13■□□□□ 0.01
CNKSR1-203ENST00000465415 MYH1P12882 1939 aa15.12■□□□□ 0.01
CNKSR1-203ENST00000465415 POLR3DP05423 398 aaPredicted RBP15.12■□□□□ 0.01
CNKSR1-203ENST00000465415 CAP2P40123 477 aa15.12■□□□□ 0.01
CNKSR1-203ENST00000465415 PTPN18Q99952 460 aa15.12■□□□□ 0.01
CNKSR1-203ENST00000465415 CFHR5Q9BXR6 569 aa15.12■□□□□ 0.01
CNKSR1-203ENST00000465415 EHD4Q9H223 541 aa15.12■□□□□ 0.01
CNKSR1-203ENST00000465415 DCP1AQ9NPI6 582 aaPredicted RBP15.12■□□□□ 0.01
CNKSR1-203ENST00000465415 ATP8A2Q9NTI2 1148 aa15.12■□□□□ 0.01
CNKSR1-203ENST00000465415 MCM9Q9NXL9 1143 aa15.12■□□□□ 0.01
CNKSR1-203ENST00000465415 SERPINB13Q9UIV8 391 aa15.12■□□□□ 0.01
CNKSR1-203ENST00000465415 KCNH4Q9UQ05 1017 aa15.12■□□□□ 0.01
CNKSR1-203ENST00000465415 ZHX2Q9Y6X8 837 aa15.12■□□□□ 0.01
CNKSR1-203ENST00000465415 PRKAB2O43741 272 aa15.11■□□□□ 0.01
CNKSR1-203ENST00000465415 OSBP2Q969R2 916 aa15.11■□□□□ 0.01
CNKSR1-203ENST00000465415 DDRGK1Q96HY6 314 aa15.11■□□□□ 0.01
CNKSR1-203ENST00000465415 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.11■□□□□ 0.01
CNKSR1-203ENST00000465415 SLC4A4Q9Y6R1 1079 aa15.11■□□□□ 0.01
CNKSR1-203ENST00000465415 RRP1BQ14684 758 aaKnown RBP15.1■□□□□ 0.01
CNKSR1-203ENST00000465415 CCDC84Q86UT8 332 aaPredicted RBP15.1■□□□□ 0.01
CNKSR1-203ENST00000465415 FAM43AQ8N2R8 423 aa15.1■□□□□ 0.01
CNKSR1-203ENST00000465415 EVI5LQ96CN4 794 aa15.1■□□□□ 0.01
CNKSR1-203ENST00000465415 ATAD5Q96QE3 1844 aa15.1■□□□□ 0.01
CNKSR1-203ENST00000465415 TRIM75PA6NK02 468 aa15.09■□□□□ 0.01
CNKSR1-203ENST00000465415 BTBD19C9JJ37 291 aa15.09■□□□□ 0.01
CNKSR1-203ENST00000465415 GPR25O00155 361 aa15.09■□□□□ 0.01
CNKSR1-203ENST00000465415 CXCL11O14625 94 aa15.09■□□□□ 0.01
CNKSR1-203ENST00000465415 GDF11O95390 407 aa15.09■□□□□ 0.01
CNKSR1-203ENST00000465415 ASNSP08243 561 aa15.09■□□□□ 0.01
CNKSR1-203ENST00000465415 PLCD1P51178 756 aa15.09■□□□□ 0.01
CNKSR1-203ENST00000465415 CRHR2Q13324 411 aa15.09■□□□□ 0.01
CNKSR1-203ENST00000465415 TAF1CQ15572 869 aaPredicted RBP15.09■□□□□ 0.01
CNKSR1-203ENST00000465415 AMOTL1Q8IY63 956 aa15.09■□□□□ 0.01
CNKSR1-203ENST00000465415 STRBPQ96SI9 672 aaKnown RBP15.09■□□□□ 0.01
CNKSR1-203ENST00000465415 TBC1D2Q9BYX2 928 aa15.09■□□□□ 0.01
CNKSR1-203ENST00000465415 ZCCHC17Q9NP64 241 aaKnown RBP15.09■□□□□ 0.01
CNKSR1-203ENST00000465415 AFG3L2Q9Y4W6 797 aa15.09■□□□□ 0.01
CNKSR1-203ENST00000465415 A0A0G2JLL6 359 aaPredicted RBP15.08■□□□□ 0
CNKSR1-203ENST00000465415 USP17L5A8MUK1 530 aa15.08■□□□□ 0
CNKSR1-203ENST00000465415 M0R2C6 588 aa15.08■□□□□ 0
CNKSR1-203ENST00000465415 GPAA1O43292 621 aa15.08■□□□□ 0
CNKSR1-203ENST00000465415 CYP2D6P10635 497 aa15.08■□□□□ 0
CNKSR1-203ENST00000465415 NOM1Q5C9Z4 860 aaKnown RBP15.08■□□□□ 0
CNKSR1-203ENST00000465415 PRRT2Q7Z6L0 340 aaPredicted RBP15.08■□□□□ 0
CNKSR1-203ENST00000465415 PLEKHM2Q8IWE5 1019 aa15.08■□□□□ 0
CNKSR1-203ENST00000465415 ZNF296Q8WUU4 475 aaPredicted RBP15.08■□□□□ 0
CNKSR1-203ENST00000465415 R3HDMLQ9H3Y0 253 aa15.08■□□□□ 0
CNKSR1-203ENST00000465415 AS3MTQ9HBK9 375 aa15.08■□□□□ 0
CNKSR1-203ENST00000465415 GINM1Q9NU53 330 aa15.08■□□□□ 0
CNKSR1-203ENST00000465415 ZBTB21Q9ULJ3 1066 aa15.08■□□□□ 0
CNKSR1-203ENST00000465415 TRIM6-TRIM34B2RNG4 842 aa15.07■□□□□ 0
CNKSR1-203ENST00000465415 GNAT2P19087 354 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms