RNA–Protein interactions for RNA: ENST00000465135.1

C1orf56-202, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-202ENST00000465135 CCL15Q16663 113 aa12.85□□□□□ -0.35
C1orf56-202ENST00000465135 SHROOM1Q2M3G4 852 aaPredicted RBP12.85□□□□□ -0.35
C1orf56-202ENST00000465135 NOL9Q5SY16 702 aaKnown RBP12.85□□□□□ -0.35
C1orf56-202ENST00000465135 LCORLQ8N3X6 602 aa12.85□□□□□ -0.35
C1orf56-202ENST00000465135 GPATCH3Q96I76 525 aa12.85□□□□□ -0.35
C1orf56-202ENST00000465135 DNAJC18Q9H819 358 aa12.85□□□□□ -0.35
C1orf56-202ENST00000465135 BAZ2AQ9UIF9 1905 aaKnown RBP12.85□□□□□ -0.35
C1orf56-202ENST00000465135 PTPRFP10586 1907 aa12.84□□□□□ -0.35
C1orf56-202ENST00000465135 GTF2A2P52657 109 aa12.84□□□□□ -0.35
C1orf56-202ENST00000465135 PPIL2Q13356 520 aa12.84□□□□□ -0.35
C1orf56-202ENST00000465135 B4GALNT3Q6L9W6 998 aa12.84□□□□□ -0.35
C1orf56-202ENST00000465135 SCYL3Q8IZE3 742 aa12.84□□□□□ -0.35
C1orf56-202ENST00000465135 FAM43AQ8N2R8 423 aa12.84□□□□□ -0.35
C1orf56-202ENST00000465135 PI4K2BQ8TCG2 481 aa12.84□□□□□ -0.35
C1orf56-202ENST00000465135 SDR42E1Q8WUS8 393 aa12.84□□□□□ -0.35
C1orf56-202ENST00000465135 ARMT1Q9H993 441 aa12.84□□□□□ -0.35
C1orf56-202ENST00000465135 SALL3Q9BXA9 1300 aa12.84□□□□□ -0.35
C1orf56-202ENST00000465135 TESPA1A2RU30 521 aaPredicted RBP12.83□□□□□ -0.36
C1orf56-202ENST00000465135 PRKAB2O43741 272 aa12.83□□□□□ -0.36
C1orf56-202ENST00000465135 TBC1D12O60347 775 aa12.83□□□□□ -0.36
C1orf56-202ENST00000465135 IGSF3O75054 1194 aa12.83□□□□□ -0.36
C1orf56-202ENST00000465135 CAPN15O75808 1086 aa12.83□□□□□ -0.36
C1orf56-202ENST00000465135 MBD4O95243 580 aa12.83□□□□□ -0.36
C1orf56-202ENST00000465135 PTPRAP18433 802 aa12.83□□□□□ -0.36
C1orf56-202ENST00000465135 MX1P20591 662 aa12.83□□□□□ -0.36
C1orf56-202ENST00000465135 JAG1P78504 1218 aa12.83□□□□□ -0.36
C1orf56-202ENST00000465135 PPATQ06203 517 aa12.83□□□□□ -0.36
C1orf56-202ENST00000465135 CRHR2Q13324 411 aa12.83□□□□□ -0.36
C1orf56-202ENST00000465135 GCC1Q96CN9 775 aa12.83□□□□□ -0.36
C1orf56-202ENST00000465135 LNPKQ9C0E8 428 aa12.83□□□□□ -0.36
C1orf56-202ENST00000465135 PICK1Q9NRD5 415 aa12.83□□□□□ -0.36
C1orf56-202ENST00000465135 PI4KBQ9UBF8 816 aa12.83□□□□□ -0.36
C1orf56-202ENST00000465135 BTBD19C9JJ37 291 aa12.82□□□□□ -0.36
C1orf56-202ENST00000465135 CTNND1O60716 968 aaKnown RBP12.82□□□□□ -0.36
C1orf56-202ENST00000465135 GDF11O95390 407 aa12.82□□□□□ -0.36
C1orf56-202ENST00000465135 CYP2D6P10635 497 aa12.82□□□□□ -0.36
C1orf56-202ENST00000465135 INHBEP58166 350 aa12.82□□□□□ -0.36
C1orf56-202ENST00000465135 SNAPC2Q13487 334 aa12.82□□□□□ -0.36
C1orf56-202ENST00000465135 ZNF296Q8WUU4 475 aaPredicted RBP12.82□□□□□ -0.36
C1orf56-202ENST00000465135 CRNKL1Q9BZJ0 848 aaKnown RBP12.82□□□□□ -0.36
C1orf56-202ENST00000465135 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.82□□□□□ -0.36
C1orf56-202ENST00000465135 PUS7LQ9H0K6 701 aaKnown RBP12.82□□□□□ -0.36
C1orf56-202ENST00000465135 DHX36Q9H2U1 1008 aaKnown RBP12.82□□□□□ -0.36
C1orf56-202ENST00000465135 RWDD1Q9H446 243 aaPredicted RBP12.82□□□□□ -0.36
C1orf56-202ENST00000465135 ZBTB47Q9UFB7 747 aaPredicted RBP12.82□□□□□ -0.36
C1orf56-202ENST00000465135 ZHX2Q9Y6X8 837 aa12.82□□□□□ -0.36
C1orf56-202ENST00000465135 TTC41PQ6P2S7 1318 aa12.82□□□□□ -0.36
C1orf56-202ENST00000465135 TRIM75PA6NK02 468 aa12.81□□□□□ -0.36
C1orf56-202ENST00000465135 SMIM22K7EJ46 135 aa12.81□□□□□ -0.36
C1orf56-202ENST00000465135 GPR25O00155 361 aa12.81□□□□□ -0.36
C1orf56-202ENST00000465135 ALDH1A1P00352 501 aa12.81□□□□□ -0.36
C1orf56-202ENST00000465135 CETPP11597 493 aa12.81□□□□□ -0.36
C1orf56-202ENST00000465135 PLCD1P51178 756 aa12.81□□□□□ -0.36
C1orf56-202ENST00000465135 AAMPQ13685 434 aa12.81□□□□□ -0.36
C1orf56-202ENST00000465135 MOGSQ13724 837 aa12.81□□□□□ -0.36
C1orf56-202ENST00000465135 CRACR2BQ8N4Y2 399 aaPredicted RBP12.81□□□□□ -0.36
C1orf56-202ENST00000465135 KBTBD3Q8NAB2 608 aa12.81□□□□□ -0.36
C1orf56-202ENST00000465135 TRIM34Q9BYJ4 488 aa12.81□□□□□ -0.36
C1orf56-202ENST00000465135 HERC5Q9UII4 1024 aaKnown RBP12.81□□□□□ -0.36
C1orf56-202ENST00000465135 KCNH4Q9UQ05 1017 aa12.81□□□□□ -0.36
C1orf56-202ENST00000465135 HTTP42858 3142 aa12.8□□□□□ -0.36
C1orf56-202ENST00000465135 ERC2O15083 957 aa12.8□□□□□ -0.36
C1orf56-202ENST00000465135 GLRX3O76003 335 aaKnown RBP12.8□□□□□ -0.36
C1orf56-202ENST00000465135 HLA-DOAP06340 250 aa12.8□□□□□ -0.36
C1orf56-202ENST00000465135 CAP2P40123 477 aa12.8□□□□□ -0.36
C1orf56-202ENST00000465135 DGKZQ13574 1117 aa12.8□□□□□ -0.36
C1orf56-202ENST00000465135 UBE3CQ15386 1083 aa12.8□□□□□ -0.36
C1orf56-202ENST00000465135 TAF1CQ15572 869 aaPredicted RBP12.8□□□□□ -0.36
C1orf56-202ENST00000465135 OTUD7BQ6GQQ9 843 aa12.8□□□□□ -0.36
C1orf56-202ENST00000465135 TMED8Q6PL24 325 aaPredicted RBP12.8□□□□□ -0.36
C1orf56-202ENST00000465135 SMC5Q8IY18 1101 aa12.8□□□□□ -0.36
C1orf56-202ENST00000465135 MCOLN1Q9GZU1 580 aa12.8□□□□□ -0.36
C1orf56-202ENST00000465135 RNF39Q9H2S5 420 aa12.8□□□□□ -0.36
C1orf56-202ENST00000465135 DCP1AQ9NPI6 582 aaPredicted RBP12.8□□□□□ -0.36
C1orf56-202ENST00000465135 MCM9Q9NXL9 1143 aa12.8□□□□□ -0.36
C1orf56-202ENST00000465135 AFG3L2Q9Y4W6 797 aa12.8□□□□□ -0.36
C1orf56-202ENST00000465135 ZSWIM8A7E2V4 1837 aa12.8□□□□□ -0.36
C1orf56-202ENST00000465135 CENPFP49454 3210 aa12.8□□□□□ -0.36
C1orf56-202ENST00000465135 CYP2D7A0A087X1C5 515 aa12.79□□□□□ -0.36
C1orf56-202ENST00000465135 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
C1orf56-202ENST00000465135 POLR3DP05423 398 aaPredicted RBP12.79□□□□□ -0.36
C1orf56-202ENST00000465135 PDE1AP54750 535 aa12.79□□□□□ -0.36
C1orf56-202ENST00000465135 CAP1Q01518 475 aa12.79□□□□□ -0.36
C1orf56-202ENST00000465135 IFFO2Q5TF58 517 aa12.79□□□□□ -0.36
C1orf56-202ENST00000465135 GADL1Q6ZQY3 521 aa12.79□□□□□ -0.36
C1orf56-202ENST00000465135 METTL16Q86W50 562 aaKnown RBP12.79□□□□□ -0.36
C1orf56-202ENST00000465135 CERS3Q8IU89 383 aa12.79□□□□□ -0.36
C1orf56-202ENST00000465135 OSBP2Q969R2 916 aa12.79□□□□□ -0.36
C1orf56-202ENST00000465135 FSD1Q9BTV5 496 aa12.79□□□□□ -0.36
C1orf56-202ENST00000465135 CFHR5Q9BXR6 569 aa12.79□□□□□ -0.36
C1orf56-202ENST00000465135 MYH8P13535 1937 aa12.78□□□□□ -0.36
C1orf56-202ENST00000465135 A0A0G2JLL6 359 aaPredicted RBP12.78□□□□□ -0.36
C1orf56-202ENST00000465135 M0R2C6 588 aa12.78□□□□□ -0.36
C1orf56-202ENST00000465135 RNF113AO15541 343 aaKnown RBP12.78□□□□□ -0.36
C1orf56-202ENST00000465135 SPP2Q13103 211 aa12.78□□□□□ -0.36
C1orf56-202ENST00000465135 ZSCAN25Q6NSZ9 544 aa12.78□□□□□ -0.36
C1orf56-202ENST00000465135 GPAT2Q6NUI2 795 aa12.78□□□□□ -0.36
C1orf56-202ENST00000465135 PRRT2Q7Z6L0 340 aaPredicted RBP12.78□□□□□ -0.36
C1orf56-202ENST00000465135 FOXP4Q8IVH2 680 aaPredicted RBP12.78□□□□□ -0.36
C1orf56-202ENST00000465135 SLC44A5Q8NCS7 719 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms