RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 CDCA5Q96FF9 252 aa10.71□□□□□ -0.69
NUDCD3-204ENST00000464812 KIF2CQ99661 725 aa10.71□□□□□ -0.69
NUDCD3-204ENST00000464812 OSBPL5Q9H0X9 879 aaPredicted RBP10.71□□□□□ -0.69
NUDCD3-204ENST00000464812 SAP30BPQ9UHR5 308 aaKnown RBP10.71□□□□□ -0.69
NUDCD3-204ENST00000464812 ROBO3Q96MS0 1386 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 PITPNM2Q9BZ72 1349 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 RASSF10A6NK89 507 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 TMEM88BA6NKF7 163 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 EPB41L2O43491 1005 aaKnown RBP10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 CELF2O95319 508 aaKnown RBP10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 SLURP2P0DP57 97 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 USP5P45974 858 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 TDO2P48775 406 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 RBM25P49756 843 aaKnown RBP10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 CTR9Q6PD62 1173 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 CDC37L1Q7L3B6 337 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 SAPCD2Q86UD0 394 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 TEPSINQ96N21 525 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 IDI2Q9BXS1 227 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 C22orf23Q9BZE7 217 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 NAPBQ9H115 298 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 TSHZ2Q9NRE2 1034 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 SNX14Q9Y5W7 946 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 TLL2Q9Y6L7 1015 aa10.7□□□□□ -0.7
NUDCD3-204ENST00000464812 ATRNL1Q5VV63 1379 aa10.69□□□□□ -0.7
NUDCD3-204ENST00000464812 NEDD4P46934 1319 aa10.69□□□□□ -0.7
NUDCD3-204ENST00000464812 TCP10L2B9ZVM9 353 aa10.69□□□□□ -0.7
NUDCD3-204ENST00000464812 USP17L12C9JPN9 530 aa10.69□□□□□ -0.7
NUDCD3-204ENST00000464812 USP17L21D6R901 530 aa10.69□□□□□ -0.7
NUDCD3-204ENST00000464812 VEGFBP49765 207 aa10.69□□□□□ -0.7
NUDCD3-204ENST00000464812 PLCD1P51178 756 aa10.69□□□□□ -0.7
NUDCD3-204ENST00000464812 CTDSPL2Q05D32 466 aa10.69□□□□□ -0.7
NUDCD3-204ENST00000464812 TCP10Q12799 353 aa10.69□□□□□ -0.7
NUDCD3-204ENST00000464812 ADCK5Q3MIX3 580 aa10.69□□□□□ -0.7
NUDCD3-204ENST00000464812 GIMAP6Q6P9H5 292 aa10.69□□□□□ -0.7
NUDCD3-204ENST00000464812 CERS3Q8IU89 383 aa10.69□□□□□ -0.7
NUDCD3-204ENST00000464812 VEZTQ9HBM0 779 aa10.69□□□□□ -0.7
NUDCD3-204ENST00000464812 ATP8A2Q9NTI2 1148 aa10.69□□□□□ -0.7
NUDCD3-204ENST00000464812 MCM9Q9NXL9 1143 aa10.69□□□□□ -0.7
NUDCD3-204ENST00000464812 DOCK1Q14185 1865 aa10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 DDTLA6NHG4 134 aaPredicted RBP10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 FAM155AB1AL88 458 aaPredicted RBP10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 MMP14P50281 582 aa10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 PPARAQ07869 468 aa10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 SBK1Q52WX2 424 aa10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 CYP4F22Q6NT55 531 aa10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 STK11IPQ8N1F8 1099 aa10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 SLC44A5Q8NCS7 719 aa10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 IL17RAQ96F46 866 aa10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 NACAP1Q9BZK3 213 aa10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 TMEM39BQ9GZU3 492 aa10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 DNAJC18Q9H819 358 aa10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 INCENPQ9NQS7 918 aa10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 ARPP21Q9UBL0 812 aaPredicted RBP10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 MYH4Q9Y623 1939 aa10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 PHIPQ8WWQ0 1821 aa10.68□□□□□ -0.7
NUDCD3-204ENST00000464812 FAM196BA6NMK8 535 aa10.67□□□□□ -0.7
NUDCD3-204ENST00000464812 MINDY4BA8MYZ0 360 aa10.67□□□□□ -0.7
NUDCD3-204ENST00000464812 E7EWF7 191 aa10.67□□□□□ -0.7
NUDCD3-204ENST00000464812 ENTPD3O75355 529 aa10.67□□□□□ -0.7
NUDCD3-204ENST00000464812 CPA1P15085 419 aa10.67□□□□□ -0.7
NUDCD3-204ENST00000464812 C12orf60Q5U649 245 aa10.67□□□□□ -0.7
NUDCD3-204ENST00000464812 FKBP1CQ5VVH2 108 aa10.67□□□□□ -0.7
NUDCD3-204ENST00000464812 ZNF408Q9H9D4 720 aa10.67□□□□□ -0.7
NUDCD3-204ENST00000464812 UPF2Q9HAU5 1272 aaKnown RBP10.67□□□□□ -0.7
NUDCD3-204ENST00000464812 ANAPC4Q9UJX5 808 aa10.67□□□□□ -0.7
NUDCD3-204ENST00000464812 MYO1BO43795 1136 aa10.66□□□□□ -0.7
NUDCD3-204ENST00000464812 AOC2O75106 756 aa10.66□□□□□ -0.7
NUDCD3-204ENST00000464812 GABPAQ06546 454 aa10.66□□□□□ -0.7
NUDCD3-204ENST00000464812 IMMTQ16891 758 aaKnown RBP10.66□□□□□ -0.7
NUDCD3-204ENST00000464812 NBPF12Q5TAG4 269 aaPredicted RBP10.66□□□□□ -0.7
NUDCD3-204ENST00000464812 FAM151AQ8WW52 585 aa10.66□□□□□ -0.7
NUDCD3-204ENST00000464812 DCPSQ96C86 337 aaKnown RBP10.66□□□□□ -0.7
NUDCD3-204ENST00000464812 DYNLL2Q96FJ2 89 aa10.66□□□□□ -0.7
NUDCD3-204ENST00000464812 TMOD2Q9NZR1 351 aa10.66□□□□□ -0.7
NUDCD3-204ENST00000464812 CTNNA3Q9UI47 895 aa10.66□□□□□ -0.7
NUDCD3-204ENST00000464812 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.66□□□□□ -0.7
NUDCD3-204ENST00000464812 ZNF213O14771 459 aa10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 EIF5BO60841 1220 aaKnown RBP10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 PRDM1O75626 825 aa10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 POLR3DP05423 398 aaPredicted RBP10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 MCCP23508 829 aa10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 ANTXR2P58335 489 aa10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 ANAPC15P60006 121 aa10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 RASA3Q14644 834 aa10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 SHROOM1Q2M3G4 852 aaPredicted RBP10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 TSGA10IPQ3SY00 556 aa10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 FAM83AQ86UY5 434 aa10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 APOBEC3FQ8IUX4 373 aaKnown RBP10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 SULF1Q8IWU6 871 aa10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 MB21D2Q8IYB1 491 aaPredicted RBP10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 STAG1Q8WVM7 1258 aa10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 JAKMIP1Q96N16 626 aaKnown RBP10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 UPF3BQ9BZI7 483 aaKnown RBP10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 DEFB129Q9H1M3 183 aa10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 GBA2Q9HCG7 927 aaPredicted RBP10.65□□□□□ -0.7
NUDCD3-204ENST00000464812 UBE2Q2LH0YL09 131 aa10.64□□□□□ -0.71
NUDCD3-204ENST00000464812 CD2BP2O95400 341 aaKnown RBP10.64□□□□□ -0.71
NUDCD3-204ENST00000464812 FGRP09769 529 aa10.64□□□□□ -0.71
NUDCD3-204ENST00000464812 SHMT1P34896 483 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms