RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 CILPO75339 1184 aa6.75□□□□□ -1.33
CLK1-208ENST00000464454 F13A1P00488 732 aa6.75□□□□□ -1.33
CLK1-208ENST00000464454 NEFMP07197 916 aa6.75□□□□□ -1.33
CLK1-208ENST00000464454 FAM160A1Q05DH4 1040 aa6.75□□□□□ -1.33
CLK1-208ENST00000464454 PDE4BQ07343 736 aa6.75□□□□□ -1.33
CLK1-208ENST00000464454 MPP2Q14168 576 aa6.75□□□□□ -1.33
CLK1-208ENST00000464454 CPSF6Q16630 551 aaKnown RBP eCLIP6.75□□□□□ -1.33
CLK1-208ENST00000464454 BNC2Q6ZN30 1099 aaPredicted RBP6.75□□□□□ -1.33
CLK1-208ENST00000464454 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.75□□□□□ -1.33
CLK1-208ENST00000464454 METTL22Q9BUU2 404 aaPredicted RBP6.75□□□□□ -1.33
CLK1-208ENST00000464454 WNT10AQ9GZT5 417 aa6.75□□□□□ -1.33
CLK1-208ENST00000464454 FAM221AA4D161 298 aa6.74□□□□□ -1.33
CLK1-208ENST00000464454 GFRA2O00451 464 aa6.74□□□□□ -1.33
CLK1-208ENST00000464454 ETF1P62495 437 aaKnown RBP6.74□□□□□ -1.33
CLK1-208ENST00000464454 CYP27A1Q02318 531 aa6.74□□□□□ -1.33
CLK1-208ENST00000464454 CWF19L2Q2TBE0 894 aaKnown RBP6.74□□□□□ -1.33
CLK1-208ENST00000464454 FAM196AQ6ZSG2 479 aa6.74□□□□□ -1.33
CLK1-208ENST00000464454 ZAR1Q86SH2 424 aa6.74□□□□□ -1.33
CLK1-208ENST00000464454 TBC1D32Q96NH3 1257 aa6.74□□□□□ -1.33
CLK1-208ENST00000464454 GARTP22102 1010 aa6.73□□□□□ -1.33
CLK1-208ENST00000464454 NTF4P34130 210 aa6.73□□□□□ -1.33
CLK1-208ENST00000464454 FBXL19Q6PCT2 694 aa6.73□□□□□ -1.33
CLK1-208ENST00000464454 SEZ6L2Q6UXD5 910 aa6.73□□□□□ -1.33
CLK1-208ENST00000464454 KIAA0825Q8IV33 1275 aa6.73□□□□□ -1.33
CLK1-208ENST00000464454 ZNF296Q8WUU4 475 aaPredicted RBP6.73□□□□□ -1.33
CLK1-208ENST00000464454 MFSD14AQ96MC6 490 aa6.73□□□□□ -1.33
CLK1-208ENST00000464454 LRRC3Q9BY71 257 aa6.73□□□□□ -1.33
CLK1-208ENST00000464454 ATG3Q9NT62 314 aa6.73□□□□□ -1.33
CLK1-208ENST00000464454 GREM1O60565 184 aa6.72□□□□□ -1.33
CLK1-208ENST00000464454 GRK4P32298 578 aa6.72□□□□□ -1.33
CLK1-208ENST00000464454 HDLBPQ00341 1268 aaKnown RBP6.72□□□□□ -1.33
CLK1-208ENST00000464454 HID1Q8IV36 788 aa6.72□□□□□ -1.33
CLK1-208ENST00000464454 ZNF654Q8IZM8 581 aa6.72□□□□□ -1.33
CLK1-208ENST00000464454 FBXL6Q8N531 539 aa6.72□□□□□ -1.33
CLK1-208ENST00000464454 SHKBP1Q8TBC3 707 aa6.72□□□□□ -1.33
CLK1-208ENST00000464454 SPON2Q9BUD6 331 aa6.72□□□□□ -1.33
CLK1-208ENST00000464454 C1GALT1Q9NS00 363 aa6.72□□□□□ -1.33
CLK1-208ENST00000464454 ADAM30Q9UKF2 790 aa6.72□□□□□ -1.33
CLK1-208ENST00000464454 PGRP06401 933 aa6.71□□□□□ -1.34
CLK1-208ENST00000464454 TCF3P15923 654 aa6.71□□□□□ -1.34
CLK1-208ENST00000464454 CAP2P40123 477 aa6.71□□□□□ -1.34
CLK1-208ENST00000464454 CDK8P49336 464 aa6.71□□□□□ -1.34
CLK1-208ENST00000464454 CYP27C1Q4G0S4 372 aa6.71□□□□□ -1.34
CLK1-208ENST00000464454 ZNF394Q53GI3 561 aa6.71□□□□□ -1.34
CLK1-208ENST00000464454 ZMYM1Q5SVZ6 1142 aa6.71□□□□□ -1.34
CLK1-208ENST00000464454 DUSP27Q5VZP5 1158 aa6.71□□□□□ -1.34
CLK1-208ENST00000464454 REC114Q7Z4M0 266 aa6.71□□□□□ -1.34
CLK1-208ENST00000464454 METTL16Q86W50 562 aaKnown RBP6.71□□□□□ -1.34
CLK1-208ENST00000464454 NT5DC4Q86YG4 428 aa6.71□□□□□ -1.34
CLK1-208ENST00000464454 NT5C1AQ9BXI3 368 aa6.71□□□□□ -1.34
CLK1-208ENST00000464454 OSBPL1AQ9BXW6 950 aa6.71□□□□□ -1.34
CLK1-208ENST00000464454 LGR6Q9HBX8 967 aa6.71□□□□□ -1.34
CLK1-208ENST00000464454 IGSF5Q9NSI5 407 aa6.71□□□□□ -1.34
CLK1-208ENST00000464454 ADAMTS1Q9UHI8 967 aa6.71□□□□□ -1.34
CLK1-208ENST00000464454 DDX41Q9UJV9 622 aaKnown RBP6.71□□□□□ -1.34
CLK1-208ENST00000464454 WDR64B1ANS9 1081 aa6.7□□□□□ -1.34
CLK1-208ENST00000464454 DYNC1LI2O43237 492 aaPredicted RBP6.7□□□□□ -1.34
CLK1-208ENST00000464454 LRIG2O94898 1065 aa6.7□□□□□ -1.34
CLK1-208ENST00000464454 GRIK1P39086 918 aa6.7□□□□□ -1.34
CLK1-208ENST00000464454 APOBRQ0VD83 1088 aa6.7□□□□□ -1.34
CLK1-208ENST00000464454 CDK5R2Q13319 367 aa6.7□□□□□ -1.34
CLK1-208ENST00000464454 MLECQ14165 292 aa6.7□□□□□ -1.34
CLK1-208ENST00000464454 OGFOD3Q6PK18 319 aa6.7□□□□□ -1.34
CLK1-208ENST00000464454 ZDHHC13Q8IUH4 622 aa6.7□□□□□ -1.34
CLK1-208ENST00000464454 GATA6Q92908 595 aa6.7□□□□□ -1.34
CLK1-208ENST00000464454 RNF112Q9ULX5 631 aa6.7□□□□□ -1.34
CLK1-208ENST00000464454 PCDHGB7Q9Y5F8 929 aa6.7□□□□□ -1.34
CLK1-208ENST00000464454 F13BP05160 661 aa6.69□□□□□ -1.34
CLK1-208ENST00000464454 PLCG1P19174 1290 aa6.69□□□□□ -1.34
CLK1-208ENST00000464454 ITGB7P26010 798 aa6.69□□□□□ -1.34
CLK1-208ENST00000464454 ADMP35318 185 aa6.69□□□□□ -1.34
CLK1-208ENST00000464454 ARMCX6Q7L4S7 300 aa6.69□□□□□ -1.34
CLK1-208ENST00000464454 MFSD2AQ8NA29 543 aa6.69□□□□□ -1.34
CLK1-208ENST00000464454 SPATA32Q96LK8 384 aa6.69□□□□□ -1.34
CLK1-208ENST00000464454 FOXQ1Q9C009 403 aa6.69□□□□□ -1.34
CLK1-208ENST00000464454 LEMD3Q9Y2U8 911 aa6.69□□□□□ -1.34
CLK1-208ENST00000464454 PRR36Q9H6K5 1346 aa6.69□□□□□ -1.34
CLK1-208ENST00000464454 TLR3O15455 904 aaKnown RBP6.68□□□□□ -1.34
CLK1-208ENST00000464454 FAM87AP0C7U9 286 aa6.68□□□□□ -1.34
CLK1-208ENST00000464454 SLBPQ14493 270 aaKnown RBP eCLIP6.68□□□□□ -1.34
CLK1-208ENST00000464454 TMEM201Q5SNT2 666 aa6.68□□□□□ -1.34
CLK1-208ENST00000464454 SLC6A19Q695T7 634 aa6.68□□□□□ -1.34
CLK1-208ENST00000464454 INTS5Q6P9B9 1019 aaKnown RBP6.68□□□□□ -1.34
CLK1-208ENST00000464454 MRPL41Q8IXM3 137 aaKnown RBP6.68□□□□□ -1.34
CLK1-208ENST00000464454 FBXO27Q8NI29 283 aa6.68□□□□□ -1.34
CLK1-208ENST00000464454 TGIF2Q9GZN2 237 aa6.68□□□□□ -1.34
CLK1-208ENST00000464454 FBRSQ9HAH7 460 aa6.68□□□□□ -1.34
CLK1-208ENST00000464454 PRDM10Q9NQV6 1147 aa6.68□□□□□ -1.34
CLK1-208ENST00000464454 PIM2Q9P1W9 311 aa6.68□□□□□ -1.34
CLK1-208ENST00000464454 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.68□□□□□ -1.34
CLK1-208ENST00000464454 FAM170BA6NMN3 283 aa6.67□□□□□ -1.34
CLK1-208ENST00000464454 CST3P01034 146 aaPredicted RBP6.67□□□□□ -1.34
CLK1-208ENST00000464454 ZNF165P49910 485 aa6.67□□□□□ -1.34
CLK1-208ENST00000464454 YARSP54577 528 aaKnown RBP6.67□□□□□ -1.34
CLK1-208ENST00000464454 RACK1P63244 317 aaKnown RBP6.67□□□□□ -1.34
CLK1-208ENST00000464454 ZNF746Q6NUN9 644 aaPredicted RBP6.67□□□□□ -1.34
CLK1-208ENST00000464454 ZNF765Q7L2R6 523 aa6.67□□□□□ -1.34
CLK1-208ENST00000464454 UBE3DQ7Z6J8 389 aa6.67□□□□□ -1.34
CLK1-208ENST00000464454 MCATQ8IVS2 390 aaKnown RBP6.67□□□□□ -1.34
CLK1-208ENST00000464454 REXO1Q8N1G1 1221 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms