RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 PCDHGC5Q9Y5F6 944 aa6.85□□□□□ -1.31
USP9X-204ENST00000463829 SNCAIPQ9Y6H5 919 aa6.85□□□□□ -1.31
USP9X-204ENST00000463829 TIAF1O95411 115 aa6.84□□□□□ -1.31
USP9X-204ENST00000463829 WNT11O96014 354 aa6.84□□□□□ -1.31
USP9X-204ENST00000463829 ADH5P11766 374 aa6.84□□□□□ -1.31
USP9X-204ENST00000463829 DRD2P14416 443 aa6.84□□□□□ -1.31
USP9X-204ENST00000463829 TAL1P17542 331 aaPredicted RBP6.84□□□□□ -1.31
USP9X-204ENST00000463829 APOBRQ0VD83 1088 aa6.84□□□□□ -1.31
USP9X-204ENST00000463829 MPP2Q14168 576 aa6.84□□□□□ -1.31
USP9X-204ENST00000463829 INPP5AQ14642 412 aa6.84□□□□□ -1.31
USP9X-204ENST00000463829 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.84□□□□□ -1.31
USP9X-204ENST00000463829 ELMO3Q96BJ8 720 aa6.84□□□□□ -1.31
USP9X-204ENST00000463829 EAF1Q96JC9 268 aaPredicted RBP6.84□□□□□ -1.31
USP9X-204ENST00000463829 C8orf37Q96NL8 207 aa6.84□□□□□ -1.31
USP9X-204ENST00000463829 CAPN10Q9HC96 672 aa6.84□□□□□ -1.31
USP9X-204ENST00000463829 UBP1Q9NZI7 540 aa6.84□□□□□ -1.31
USP9X-204ENST00000463829 PPP1R9AQ9ULJ8 1098 aa6.84□□□□□ -1.31
USP9X-204ENST00000463829 OAS3Q9Y6K5 1087 aaKnown RBP6.84□□□□□ -1.31
USP9X-204ENST00000463829 TMPRSS2O15393 492 aa6.83□□□□□ -1.32
USP9X-204ENST00000463829 GJA8P48165 433 aa6.83□□□□□ -1.32
USP9X-204ENST00000463829 TNNI2P48788 182 aa6.83□□□□□ -1.32
USP9X-204ENST00000463829 ERVK-24P63145 666 aa6.83□□□□□ -1.32
USP9X-204ENST00000463829 CWF19L2Q2TBE0 894 aaKnown RBP6.83□□□□□ -1.32
USP9X-204ENST00000463829 WIPI1Q5MNZ9 446 aaPredicted RBP6.83□□□□□ -1.32
USP9X-204ENST00000463829 LRFN4Q6PJG9 635 aa6.83□□□□□ -1.32
USP9X-204ENST00000463829 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.83□□□□□ -1.32
USP9X-204ENST00000463829 SHKBP1Q8TBC3 707 aa6.83□□□□□ -1.32
USP9X-204ENST00000463829 GPRASP2Q96D09 838 aa6.83□□□□□ -1.32
USP9X-204ENST00000463829 PLPPR2Q96GM1 343 aa6.83□□□□□ -1.32
USP9X-204ENST00000463829 LRRC3Q9BY71 257 aa6.83□□□□□ -1.32
USP9X-204ENST00000463829 ATG3Q9NT62 314 aa6.83□□□□□ -1.32
USP9X-204ENST00000463829 CRIM1Q9NZV1 1036 aa6.83□□□□□ -1.32
USP9X-204ENST00000463829 AP4E1Q9UPM8 1137 aa6.83□□□□□ -1.32
USP9X-204ENST00000463829 DCDC2CA8MYV0 355 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 WDR64B1ANS9 1081 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 GFRA2O00451 464 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 TLR3O15455 904 aaKnown RBP6.82□□□□□ -1.32
USP9X-204ENST00000463829 SPINK2P20155 84 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 RXRBP28702 533 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 PREPP48147 710 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 NAALADL2Q58DX5 795 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 CYFIP1Q7L576 1253 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 DYMQ7RTS9 669 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 REC114Q7Z4M0 266 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 C12orf40Q86WS4 652 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 VPS37DQ86XT2 251 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 FBXO27Q8NI29 283 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 RASGRP4Q8TDF6 673 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 NKD1Q969G9 470 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 ATXN3LQ9H3M9 355 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 TACC3Q9Y6A5 838 aa6.82□□□□□ -1.32
USP9X-204ENST00000463829 PRR19A6NJB7 356 aa6.81□□□□□ -1.32
USP9X-204ENST00000463829 ASPAP45381 313 aa6.81□□□□□ -1.32
USP9X-204ENST00000463829 CRKP46108 304 aa6.81□□□□□ -1.32
USP9X-204ENST00000463829 CDK8P49336 464 aa6.81□□□□□ -1.32
USP9X-204ENST00000463829 RING1Q06587 406 aa6.81□□□□□ -1.32
USP9X-204ENST00000463829 SEZ6Q53EL9 994 aa6.81□□□□□ -1.32
USP9X-204ENST00000463829 DTX1Q86Y01 620 aa6.81□□□□□ -1.32
USP9X-204ENST00000463829 SLITRK4Q8IW52 837 aa6.81□□□□□ -1.32
USP9X-204ENST00000463829 SLC43A3Q8NBI5 491 aa6.81□□□□□ -1.32
USP9X-204ENST00000463829 C2CD4AQ8NCU7 369 aaPredicted RBP6.81□□□□□ -1.32
USP9X-204ENST00000463829 FANCD2OSQ96PS1 177 aa6.81□□□□□ -1.32
USP9X-204ENST00000463829 TINF2Q9BSI4 451 aa6.81□□□□□ -1.32
USP9X-204ENST00000463829 GSX1Q9H4S2 264 aaPredicted RBP6.81□□□□□ -1.32
USP9X-204ENST00000463829 PICK1Q9NRD5 415 aa6.81□□□□□ -1.32
USP9X-204ENST00000463829 DISC1Q9NRI5 854 aa6.81□□□□□ -1.32
USP9X-204ENST00000463829 CSADQ9Y600 493 aa6.81□□□□□ -1.32
USP9X-204ENST00000463829 FANCGO15287 622 aa6.8□□□□□ -1.32
USP9X-204ENST00000463829 YBX3P16989 372 aaKnown RBP eCLIP6.8□□□□□ -1.32
USP9X-204ENST00000463829 MAP4P27816 1152 aaKnown RBP6.8□□□□□ -1.32
USP9X-204ENST00000463829 USP11P51784 963 aa6.8□□□□□ -1.32
USP9X-204ENST00000463829 COL9A2Q14055 689 aaPredicted RBP6.8□□□□□ -1.32
USP9X-204ENST00000463829 RNF214Q8ND24 703 aa6.8□□□□□ -1.32
USP9X-204ENST00000463829 FMNL2Q96PY5 1086 aa6.8□□□□□ -1.32
USP9X-204ENST00000463829 LEMD3Q9Y2U8 911 aa6.8□□□□□ -1.32
USP9X-204ENST00000463829 RNF114Q9Y508 228 aa6.8□□□□□ -1.32
USP9X-204ENST00000463829 ACTL7BQ9Y614 415 aa6.8□□□□□ -1.32
USP9X-204ENST00000463829 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.79□□□□□ -1.32
USP9X-204ENST00000463829 PRAMEF27A3QJZ7 478 aa6.79□□□□□ -1.32
USP9X-204ENST00000463829 MCM4P33991 863 aa6.79□□□□□ -1.32
USP9X-204ENST00000463829 ZNF165P49910 485 aa6.79□□□□□ -1.32
USP9X-204ENST00000463829 PDE4BQ07343 736 aa6.79□□□□□ -1.32
USP9X-204ENST00000463829 PPM1JQ5JR12 505 aa6.79□□□□□ -1.32
USP9X-204ENST00000463829 REXO1Q8N1G1 1221 aaKnown RBP6.79□□□□□ -1.32
USP9X-204ENST00000463829 SEC16BQ96JE7 1060 aa6.79□□□□□ -1.32
USP9X-204ENST00000463829 MFSD14AQ96MC6 490 aa6.79□□□□□ -1.32
USP9X-204ENST00000463829 OSBPL1AQ9BXW6 950 aa6.79□□□□□ -1.32
USP9X-204ENST00000463829 WNT10AQ9GZT5 417 aa6.79□□□□□ -1.32
USP9X-204ENST00000463829 PIDD1Q9HB75 910 aa6.79□□□□□ -1.32
USP9X-204ENST00000463829 BRMS1Q9HCU9 246 aa6.79□□□□□ -1.32
USP9X-204ENST00000463829 PIM2Q9P1W9 311 aa6.79□□□□□ -1.32
USP9X-204ENST00000463829 ARID5AQ03989 594 aa6.78□□□□□ -1.32
USP9X-204ENST00000463829 TTLL4Q14679 1199 aa6.78□□□□□ -1.32
USP9X-204ENST00000463829 ZBTB37Q5TC79 503 aa6.78□□□□□ -1.32
USP9X-204ENST00000463829 YIPF2Q9BWQ6 316 aa6.78□□□□□ -1.32
USP9X-204ENST00000463829 GINM1Q9NU53 330 aa6.78□□□□□ -1.32
USP9X-204ENST00000463829 FAM105AQ9NUU6 356 aa6.78□□□□□ -1.32
USP9X-204ENST00000463829 ANGEL1Q9UNK9 670 aaKnown RBP6.78□□□□□ -1.32
USP9X-204ENST00000463829 EFR3BQ9Y2G0 817 aa6.78□□□□□ -1.32
USP9X-204ENST00000463829 PRR36Q9H6K5 1346 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms