RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 SNX27Q96L92 541 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 MPHOSPH9Q99550 1183 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 CD248Q9HCU0 757 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 CHMP3Q9Y3E7 222 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 PPIP5K1Q6PFW1 1433 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 KCPQ6ZWJ8 1503 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 A0A087WUV0 522 aaPredicted RBP4.17□□□□□ -1.74
COL8A1-205ENST00000463753 CFAP99D6REC4 459 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 APAF1O14727 1248 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 PHACTR2O75167 634 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 F12P00748 615 aaPredicted RBP4.17□□□□□ -1.74
COL8A1-205ENST00000463753 ERCC3P19447 782 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 COPS2P61201 443 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 RBBP5Q15291 538 aaKnown RBP4.17□□□□□ -1.74
COL8A1-205ENST00000463753 PTPRNQ16849 979 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 TXNRD1Q16881 649 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 CC2D2BQ6DHV5 1058 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 KCNV1Q6PIU1 500 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 ANKLE1Q8NAG6 615 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 ATL2Q8NHH9 583 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 CARD11Q9BXL7 1154 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 CENPHQ9H3R5 247 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 MIS18AQ9NYP9 233 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 ODF2LQ9ULJ1 636 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 LAMB2P55268 1798 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 ST20-MTHFSA0A0A6YYL1 179 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 H3BQF6 201 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 ZRANB2O95218 330 aaKnown RBP eCLIP4.17□□□□□ -1.74
COL8A1-205ENST00000463753 RWDD2BP57060 319 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 TRAF1Q13077 416 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 USP4Q13107 963 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 ARID5BQ14865 1188 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 QPCTQ16769 361 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 CCDC27Q2M243 656 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 LUZP1Q86V48 1076 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 MYLK4Q86YV6 388 aaPredicted RBP4.17□□□□□ -1.74
COL8A1-205ENST00000463753 ERC1Q8IUD2 1116 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 ARMC2Q8NEN0 867 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 MICAL1Q8TDZ2 1067 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 CACTINQ8WUQ7 758 aaKnown RBP4.17□□□□□ -1.74
COL8A1-205ENST00000463753 RABEP2Q9H5N1 569 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 ANAPC4Q9UJX5 808 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 DOT1LQ8TEK3 1739 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 ANKRD33BA6NCL7 494 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 TLL1O43897 1013 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 SKILP12757 684 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 RFC5P40937 340 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 RANBP1P43487 201 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 RPS6KA3P51812 740 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 HDAC1Q13547 482 aaPredicted RBP4.16□□□□□ -1.74
COL8A1-205ENST00000463753 MCM6Q14566 821 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 TBC1D9Q6ZT07 1266 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 CEP57Q86XR8 500 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 IQUBQ8NA54 791 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 SLC6A16Q9GZN6 736 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 BICC1Q9H694 974 aaKnown RBP4.16□□□□□ -1.74
COL8A1-205ENST00000463753 CLIP2Q9UDT6 1046 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 SMC3Q9UQE7 1217 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 TRIM37O94972 964 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 SNUPNO95149 360 aaKnown RBP4.16□□□□□ -1.74
COL8A1-205ENST00000463753 TBC1D8O95759 1140 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 CPP00450 1065 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 FAM163BP0C2L3 166 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 CCAR2Q8N163 923 aaKnown RBP4.16□□□□□ -1.74
COL8A1-205ENST00000463753 C3orf20Q8ND61 904 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 CABLES1Q8TDN4 633 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 BAG1Q99933 345 aaPredicted RBP4.16□□□□□ -1.74
COL8A1-205ENST00000463753 CRACR2AQ9BSW2 395 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 SOS1Q07889 1333 aaPredicted RBP4.16□□□□□ -1.74
COL8A1-205ENST00000463753 CCDC171Q6TFL3 1326 aa4.16□□□□□ -1.74
COL8A1-205ENST00000463753 PES1O00541 588 aaKnown RBP4.15□□□□□ -1.74
COL8A1-205ENST00000463753 FIBPO43427 364 aa4.15□□□□□ -1.74
COL8A1-205ENST00000463753 C21orf2O43822 256 aa4.15□□□□□ -1.74
COL8A1-205ENST00000463753 RPIAP49247 311 aa4.15□□□□□ -1.74
COL8A1-205ENST00000463753 TBC1D25Q3MII6 688 aa4.15□□□□□ -1.74
COL8A1-205ENST00000463753 HHATQ5VTY9 493 aa4.15□□□□□ -1.74
COL8A1-205ENST00000463753 HOMER1Q86YM7 354 aa4.15□□□□□ -1.74
COL8A1-205ENST00000463753 ITPRIPQ8IWB1 547 aa4.15□□□□□ -1.74
COL8A1-205ENST00000463753 NKX2-3Q8TAU0 364 aa4.15□□□□□ -1.74
COL8A1-205ENST00000463753 PRR7Q8TB68 274 aa4.15□□□□□ -1.74
COL8A1-205ENST00000463753 DDX11Q96FC9 970 aa4.15□□□□□ -1.74
COL8A1-205ENST00000463753 DCAF5Q96JK2 942 aa4.15□□□□□ -1.74
COL8A1-205ENST00000463753 PDE11AQ9HCR9 933 aa4.15□□□□□ -1.74
COL8A1-205ENST00000463753 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.15□□□□□ -1.74
COL8A1-205ENST00000463753 CHCHD3Q9NX63 227 aaKnown RBP4.15□□□□□ -1.74
COL8A1-205ENST00000463753 ORC3Q9UBD5 711 aaPredicted RBP4.15□□□□□ -1.74
COL8A1-205ENST00000463753 MKRN1Q9UHC7 482 aaKnown RBP4.15□□□□□ -1.74
COL8A1-205ENST00000463753 MCM8Q9UJA3 840 aa4.15□□□□□ -1.74
COL8A1-205ENST00000463753 FAN1Q9Y2M0 1017 aa4.15□□□□□ -1.74
COL8A1-205ENST00000463753 DDX60Q8IY21 1712 aaKnown RBP4.15□□□□□ -1.75
COL8A1-205ENST00000463753 GPRASP1Q5JY77 1395 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 PNPLA7Q6ZV29 1317 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 A0A1B0GUA9 196 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 ANKRD18BA2A2Z9 1011 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 PPFIA2O75334 1257 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 RPSAP08865 295 aaKnown RBP4.15□□□□□ -1.75
COL8A1-205ENST00000463753 EIF2S2P20042 333 aaKnown RBP4.15□□□□□ -1.75
COL8A1-205ENST00000463753 MX1P20591 662 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 GPTP24298 496 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 EIF5P55010 431 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms