RNA–Protein interactions for RNA: ENST00000463741.1

SREBF2-205, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 634 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-205ENST00000463741 HMGCS2P54868 508 aa18.64■□□□□ 0.57
SREBF2-205ENST00000463741 SPP2Q13103 211 aa18.64■□□□□ 0.57
SREBF2-205ENST00000463741 ZNF280CQ8ND82 737 aa18.64■□□□□ 0.57
SREBF2-205ENST00000463741 PAWRQ96IZ0 340 aaKnown RBP18.64■□□□□ 0.57
SREBF2-205ENST00000463741 OSBPL5Q9H0X9 879 aaPredicted RBP18.64■□□□□ 0.57
SREBF2-205ENST00000463741 HMG20BQ9P0W2 317 aa18.64■□□□□ 0.57
SREBF2-205ENST00000463741 ALPK3Q96L96 1907 aa18.64■□□□□ 0.57
SREBF2-205ENST00000463741 COL2A1P02458 1487 aaPredicted RBP18.64■□□□□ 0.57
SREBF2-205ENST00000463741 GSTO1P78417 241 aa18.63■□□□□ 0.57
SREBF2-205ENST00000463741 GORABQ5T7V8 394 aa18.63■□□□□ 0.57
SREBF2-205ENST00000463741 TBC1D9Q6ZT07 1266 aa18.63■□□□□ 0.57
SREBF2-205ENST00000463741 SPATA5Q8NB90 893 aa18.63■□□□□ 0.57
SREBF2-205ENST00000463741 DIS3LQ8TF46 1054 aaKnown RBP18.63■□□□□ 0.57
SREBF2-205ENST00000463741 CRISPLD2Q9H0B8 497 aa18.63■□□□□ 0.57
SREBF2-205ENST00000463741 RAI14Q9P0K7 980 aa18.63■□□□□ 0.57
SREBF2-205ENST00000463741 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.63■□□□□ 0.57
SREBF2-205ENST00000463741 DOCK3Q8IZD9 2030 aa18.62■□□□□ 0.57
SREBF2-205ENST00000463741 NPM3O75607 178 aaKnown RBP18.62■□□□□ 0.57
SREBF2-205ENST00000463741 HMGCRP04035 888 aa18.62■□□□□ 0.57
SREBF2-205ENST00000463741 CT47B1P0C2W7 299 aaPredicted RBP18.62■□□□□ 0.57
SREBF2-205ENST00000463741 GCLCP48506 637 aaPredicted RBP18.62■□□□□ 0.57
SREBF2-205ENST00000463741 PABPC4Q13310 644 aaKnown RBP eCLIP18.62■□□□□ 0.57
SREBF2-205ENST00000463741 NSUN4Q96CB9 384 aaKnown RBP18.62■□□□□ 0.57
SREBF2-205ENST00000463741 STAP2Q9UGK3 403 aa18.62■□□□□ 0.57
SREBF2-205ENST00000463741 LAMA3Q16787 3333 aa18.61■□□□□ 0.57
SREBF2-205ENST00000463741 A0A1W2PPC1 479 aa18.61■□□□□ 0.57
SREBF2-205ENST00000463741 LDHCP07864 332 aa18.61■□□□□ 0.57
SREBF2-205ENST00000463741 GNAI3P08754 354 aa18.61■□□□□ 0.57
SREBF2-205ENST00000463741 CAPN2P17655 700 aa18.61■□□□□ 0.57
SREBF2-205ENST00000463741 CAP2P40123 477 aa18.61■□□□□ 0.57
SREBF2-205ENST00000463741 NECAB2Q7Z6G3 386 aa18.61■□□□□ 0.57
SREBF2-205ENST00000463741 TEX11Q8IYF3 940 aa18.61■□□□□ 0.57
SREBF2-205ENST00000463741 TBC1D2Q9BYX2 928 aa18.61■□□□□ 0.57
SREBF2-205ENST00000463741 ASCC2Q9H1I8 757 aaPredicted RBP18.61■□□□□ 0.57
SREBF2-205ENST00000463741 MAST2Q6P0Q8 1798 aa18.6■□□□□ 0.57
SREBF2-205ENST00000463741 USP17L5A8MUK1 530 aa18.6■□□□□ 0.57
SREBF2-205ENST00000463741 SOX1O00570 391 aaPredicted RBP18.6■□□□□ 0.57
SREBF2-205ENST00000463741 MTX1Q13505 466 aa18.6■□□□□ 0.57
SREBF2-205ENST00000463741 RRP1BQ14684 758 aaKnown RBP18.6■□□□□ 0.57
SREBF2-205ENST00000463741 C7orf61Q8IZ16 206 aa18.6■□□□□ 0.57
SREBF2-205ENST00000463741 TRMT2AQ8IZ69 625 aaKnown RBP18.6■□□□□ 0.57
SREBF2-205ENST00000463741 LRCH3Q96II8 777 aa18.6■□□□□ 0.57
SREBF2-205ENST00000463741 SIPA1L1O43166 1804 aa18.59■□□□□ 0.57
SREBF2-205ENST00000463741 MAP4K4O95819 1239 aaPredicted RBP18.59■□□□□ 0.57
SREBF2-205ENST00000463741 ARID4AP29374 1257 aaPredicted RBP18.59■□□□□ 0.57
SREBF2-205ENST00000463741 TRIM32Q13049 653 aa18.59■□□□□ 0.57
SREBF2-205ENST00000463741 SH3RF3Q8TEJ3 882 aaPredicted RBP18.59■□□□□ 0.57
SREBF2-205ENST00000463741 NOL10Q9BSC4 688 aaKnown RBP18.59■□□□□ 0.57
SREBF2-205ENST00000463741 AS3MTQ9HBK9 375 aa18.59■□□□□ 0.57
SREBF2-205ENST00000463741 LRP2BPQ9P2M1 347 aa18.59■□□□□ 0.57
SREBF2-205ENST00000463741 DDX60LQ5H9U9 1706 aaKnown RBP18.59■□□□□ 0.57
SREBF2-205ENST00000463741 MCAMP43121 646 aa18.58■□□□□ 0.56
SREBF2-205ENST00000463741 IRX3P78415 501 aaPredicted RBP18.58■□□□□ 0.56
SREBF2-205ENST00000463741 MTMR2Q13614 643 aa18.58■□□□□ 0.56
SREBF2-205ENST00000463741 ANKLE1Q8NAG6 615 aa18.58■□□□□ 0.56
SREBF2-205ENST00000463741 HMX1Q9NP08 348 aaPredicted RBP18.58■□□□□ 0.56
SREBF2-205ENST00000463741 HERC5Q9UII4 1024 aaKnown RBP18.58■□□□□ 0.56
SREBF2-205ENST00000463741 ZMYND8Q9ULU4 1186 aaPredicted RBP18.58■□□□□ 0.56
SREBF2-205ENST00000463741 RPTORQ8N122 1335 aa18.57■□□□□ 0.56
SREBF2-205ENST00000463741 RARSP54136 660 aaKnown RBP18.57■□□□□ 0.56
SREBF2-205ENST00000463741 SH3D19Q5HYK7 790 aa18.57■□□□□ 0.56
SREBF2-205ENST00000463741 TRIB2Q92519 343 aa18.57■□□□□ 0.56
SREBF2-205ENST00000463741 GJD2Q9UKL4 321 aa18.57■□□□□ 0.56
SREBF2-205ENST00000463741 PLXNB2O15031 1838 aa18.57■□□□□ 0.56
SREBF2-205ENST00000463741 SLC17A8Q8NDX2 589 aa18.56■□□□□ 0.56
SREBF2-205ENST00000463741 NBPF3Q9H094 633 aa18.56■□□□□ 0.56
SREBF2-205ENST00000463741 AATFQ9NY61 560 aaKnown RBP eCLIP18.56■□□□□ 0.56
SREBF2-205ENST00000463741 TMOD4Q9NZQ9 345 aa18.56■□□□□ 0.56
SREBF2-205ENST00000463741 PI4KBQ9UBF8 816 aa18.56■□□□□ 0.56
SREBF2-205ENST00000463741 MORF4L1Q9UBU8 362 aa18.56■□□□□ 0.56
SREBF2-205ENST00000463741 PEX10O60683 326 aa18.55■□□□□ 0.56
SREBF2-205ENST00000463741 UQCRFS1P1P0C7P4 283 aa18.55■□□□□ 0.56
SREBF2-205ENST00000463741 CYP2B6P20813 491 aa18.55■□□□□ 0.56
SREBF2-205ENST00000463741 NAA16Q6N069 864 aaPredicted RBP18.55■□□□□ 0.56
SREBF2-205ENST00000463741 MAPKAPK5Q8IW41 473 aa18.55■□□□□ 0.56
SREBF2-205ENST00000463741 ARHGAP45Q92619 1136 aa18.55■□□□□ 0.56
SREBF2-205ENST00000463741 TRIM34Q9BYJ4 488 aa18.55■□□□□ 0.56
SREBF2-205ENST00000463741 DHX36Q9H2U1 1008 aaKnown RBP18.55■□□□□ 0.56
SREBF2-205ENST00000463741 SNRKQ9NRH2 765 aa18.55■□□□□ 0.56
SREBF2-205ENST00000463741 CDK5RAP2Q96SN8 1893 aa18.54■□□□□ 0.56
SREBF2-205ENST00000463741 PNMA6EA0A0J9YXQ4 647 aa18.54■□□□□ 0.56
SREBF2-205ENST00000463741 BAG3O95817 575 aa18.54■□□□□ 0.56
SREBF2-205ENST00000463741 GNAI2P04899 355 aa18.54■□□□□ 0.56
SREBF2-205ENST00000463741 ASNSP08243 561 aa18.54■□□□□ 0.56
SREBF2-205ENST00000463741 SYN1P17600 705 aa18.54■□□□□ 0.56
SREBF2-205ENST00000463741 BACE1P56817 501 aa18.54■□□□□ 0.56
SREBF2-205ENST00000463741 G3BP1Q13283 466 aaKnown RBP eCLIP18.54■□□□□ 0.56
SREBF2-205ENST00000463741 CRACR2BQ8N4Y2 399 aaPredicted RBP18.54■□□□□ 0.56
SREBF2-205ENST00000463741 GDF15Q99988 308 aa18.54■□□□□ 0.56
SREBF2-205ENST00000463741 WDR18Q9BV38 432 aa18.54■□□□□ 0.56
SREBF2-205ENST00000463741 C11orf49Q9H6J7 331 aa18.54■□□□□ 0.56
SREBF2-205ENST00000463741 FOCADQ5VW36 1801 aa18.53■□□□□ 0.56
SREBF2-205ENST00000463741 FLT1P17948 1338 aa18.53■□□□□ 0.56
SREBF2-205ENST00000463741 GDF11O95390 407 aa18.53■□□□□ 0.56
SREBF2-205ENST00000463741 PRKAR2AP13861 404 aaKnown RBP18.53■□□□□ 0.56
SREBF2-205ENST00000463741 HERVK_113P62684 666 aa18.53■□□□□ 0.56
SREBF2-205ENST00000463741 SHROOM1Q2M3G4 852 aaPredicted RBP18.53■□□□□ 0.56
SREBF2-205ENST00000463741 TTC39AQ5SRH9 613 aa18.53■□□□□ 0.56
SREBF2-205ENST00000463741 TGFBRAP1Q8WUH2 860 aa18.53■□□□□ 0.56
SREBF2-205ENST00000463741 SOCS4Q8WXH5 440 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms