RNA–Protein interactions for RNA: ENST00000463687.1

VPS8-216, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-216ENST00000463687 SDE2Q6IQ49 451 aa8.68□□□□□ -1.02
VPS8-216ENST00000463687 INTS5Q6P9B9 1019 aaKnown RBP8.68□□□□□ -1.02
VPS8-216ENST00000463687 MPNDQ8N594 471 aa8.68□□□□□ -1.02
VPS8-216ENST00000463687 GPR152Q8TDT2 470 aa8.68□□□□□ -1.02
VPS8-216ENST00000463687 SLC16A10Q8TF71 515 aa8.68□□□□□ -1.02
VPS8-216ENST00000463687 CNKSR1Q969H4 720 aa8.68□□□□□ -1.02
VPS8-216ENST00000463687 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.68□□□□□ -1.02
VPS8-216ENST00000463687 ESYT1Q9BSJ8 1104 aa8.68□□□□□ -1.02
VPS8-216ENST00000463687 MBIPQ9NS73 344 aa8.68□□□□□ -1.02
VPS8-216ENST00000463687 KLK14Q9P0G3 267 aa8.68□□□□□ -1.02
VPS8-216ENST00000463687 USP16Q9Y5T5 823 aa8.68□□□□□ -1.02
VPS8-216ENST00000463687 IL16Q14005 1332 aa8.68□□□□□ -1.02
VPS8-216ENST00000463687 PNPLA7Q6ZV29 1317 aa8.68□□□□□ -1.02
VPS8-216ENST00000463687 ADAMTS7Q9UKP4 1686 aa8.68□□□□□ -1.02
VPS8-216ENST00000463687 TOGARAM1Q9Y4F4 1720 aa8.68□□□□□ -1.02
VPS8-216ENST00000463687 PRAMEF22A3QJZ6 481 aa8.67□□□□□ -1.02
VPS8-216ENST00000463687 IL2RAP01589 272 aa8.67□□□□□ -1.02
VPS8-216ENST00000463687 RACK1P63244 317 aaKnown RBP8.67□□□□□ -1.02
VPS8-216ENST00000463687 PTPN12Q05209 780 aaKnown RBP8.67□□□□□ -1.02
VPS8-216ENST00000463687 NR5A1Q13285 461 aa8.67□□□□□ -1.02
VPS8-216ENST00000463687 NNTQ13423 1086 aa8.67□□□□□ -1.02
VPS8-216ENST00000463687 COL23A1Q86Y22 540 aaPredicted RBP8.67□□□□□ -1.02
VPS8-216ENST00000463687 HPS1Q92902 700 aa8.67□□□□□ -1.02
VPS8-216ENST00000463687 OSBPL2Q9H1P3 480 aa8.67□□□□□ -1.02
VPS8-216ENST00000463687 ZBTB1Q9Y2K1 713 aa8.67□□□□□ -1.02
VPS8-216ENST00000463687 KCPQ6ZWJ8 1503 aa8.66□□□□□ -1.02
VPS8-216ENST00000463687 CLSTN1O94985 981 aa8.66□□□□□ -1.02
VPS8-216ENST00000463687 HOXB7P09629 217 aa8.66□□□□□ -1.02
VPS8-216ENST00000463687 GTF2E1P29083 439 aaPredicted RBP8.66□□□□□ -1.02
VPS8-216ENST00000463687 IL6STP40189 918 aaPredicted RBP8.66□□□□□ -1.02
VPS8-216ENST00000463687 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.66□□□□□ -1.02
VPS8-216ENST00000463687 ZNF662Q6ZS27 426 aa8.66□□□□□ -1.02
VPS8-216ENST00000463687 AMIGO3Q86WK7 504 aa8.66□□□□□ -1.02
VPS8-216ENST00000463687 TREML1Q86YW5 311 aa8.66□□□□□ -1.02
VPS8-216ENST00000463687 PHACTR1Q9C0D0 580 aa8.66□□□□□ -1.02
VPS8-216ENST00000463687 PDGFDQ9GZP0 370 aaPredicted RBP8.66□□□□□ -1.02
VPS8-216ENST00000463687 MTFR1LQ9H019 292 aa8.66□□□□□ -1.02
VPS8-216ENST00000463687 C12orf49Q9H741 205 aa8.66□□□□□ -1.02
VPS8-216ENST00000463687 USP3Q9Y6I4 520 aa8.66□□□□□ -1.02
VPS8-216ENST00000463687 BTAF1O14981 1849 aa8.66□□□□□ -1.02
VPS8-216ENST00000463687 SOS1Q07889 1333 aaPredicted RBP8.65□□□□□ -1.02
VPS8-216ENST00000463687 ZNF521Q96K83 1311 aa8.65□□□□□ -1.02
VPS8-216ENST00000463687 A0A087WZG4 1122 aa8.65□□□□□ -1.02
VPS8-216ENST00000463687 ZBTB7AO95365 584 aa8.65□□□□□ -1.02
VPS8-216ENST00000463687 A1BGP04217 495 aa8.65□□□□□ -1.02
VPS8-216ENST00000463687 EIF2S2P20042 333 aaKnown RBP8.65□□□□□ -1.02
VPS8-216ENST00000463687 RFC4P35249 363 aa8.65□□□□□ -1.02
VPS8-216ENST00000463687 ADD1P35611 737 aaKnown RBP8.65□□□□□ -1.02
VPS8-216ENST00000463687 EIF5P55010 431 aaKnown RBP8.65□□□□□ -1.02
VPS8-216ENST00000463687 TAF1CQ15572 869 aaPredicted RBP8.65□□□□□ -1.02
VPS8-216ENST00000463687 SMIM5Q71RC9 77 aa8.65□□□□□ -1.02
VPS8-216ENST00000463687 CRIPAKQ8N1N5 446 aa8.65□□□□□ -1.02
VPS8-216ENST00000463687 CHMP4AQ9BY43 222 aa8.65□□□□□ -1.02
VPS8-216ENST00000463687 MYH16Q9H6N6 1097 aa8.65□□□□□ -1.02
VPS8-216ENST00000463687 SPON1Q9HCB6 807 aa8.65□□□□□ -1.02
VPS8-216ENST00000463687 SRA1Q9HD15 236 aaKnown RBP8.65□□□□□ -1.02
VPS8-216ENST00000463687 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.65□□□□□ -1.02
VPS8-216ENST00000463687 SBF2Q86WG5 1849 aa8.65□□□□□ -1.02
VPS8-216ENST00000463687 RGPD3A6NKT7 1758 aaPredicted RBP8.65□□□□□ -1.02
VPS8-216ENST00000463687 RGPD4Q7Z3J3 1758 aa8.65□□□□□ -1.02
VPS8-216ENST00000463687 ERBB4Q15303 1308 aa8.64□□□□□ -1.03
VPS8-216ENST00000463687 OPLAHO14841 1288 aa8.64□□□□□ -1.03
VPS8-216ENST00000463687 AXIN1O15169 862 aa8.64□□□□□ -1.03
VPS8-216ENST00000463687 WFS1O76024 890 aa8.64□□□□□ -1.03
VPS8-216ENST00000463687 HIF1AQ16665 826 aa8.64□□□□□ -1.03
VPS8-216ENST00000463687 KRT24Q2M2I5 525 aa8.64□□□□□ -1.03
VPS8-216ENST00000463687 SH3PXD2AQ5TCZ1 1133 aa8.64□□□□□ -1.03
VPS8-216ENST00000463687 DUSP27Q5VZP5 1158 aa8.64□□□□□ -1.03
VPS8-216ENST00000463687 MCF2L2Q86YR7 1114 aa8.64□□□□□ -1.03
VPS8-216ENST00000463687 TSR2Q969E8 191 aaKnown RBP8.64□□□□□ -1.03
VPS8-216ENST00000463687 PIF1Q9H611 641 aa8.64□□□□□ -1.03
VPS8-216ENST00000463687 GMPR2Q9P2T1 348 aaKnown RBP8.64□□□□□ -1.03
VPS8-216ENST00000463687 FANCIQ9NVI1 1328 aa8.63□□□□□ -1.03
VPS8-216ENST00000463687 AVPP01185 164 aa8.63□□□□□ -1.03
VPS8-216ENST00000463687 C1orf53Q5VUE5 145 aa8.63□□□□□ -1.03
VPS8-216ENST00000463687 NBPF10Q6P3W6 841 aaKnown RBP8.63□□□□□ -1.03
VPS8-216ENST00000463687 NLGN1Q8N2Q7 840 aa8.63□□□□□ -1.03
VPS8-216ENST00000463687 ZDHHC1Q8WTX9 485 aa8.63□□□□□ -1.03
VPS8-216ENST00000463687 NLRP3Q96P20 1036 aa8.63□□□□□ -1.03
VPS8-216ENST00000463687 NIFKQ9BYG3 293 aaKnown RBP8.63□□□□□ -1.03
VPS8-216ENST00000463687 FAM8A1Q9UBU6 413 aa8.63□□□□□ -1.03
VPS8-216ENST00000463687 NARFQ9UHQ1 456 aa8.63□□□□□ -1.03
VPS8-216ENST00000463687 RREB1Q92766 1687 aa8.62□□□□□ -1.03
VPS8-216ENST00000463687 PAPPAQ13219 1627 aa8.62□□□□□ -1.03
VPS8-216ENST00000463687 ELL2O00472 640 aaPredicted RBP8.62□□□□□ -1.03
VPS8-216ENST00000463687 GYS1P13807 737 aa8.62□□□□□ -1.03
VPS8-216ENST00000463687 POLD1P28340 1107 aa8.62□□□□□ -1.03
VPS8-216ENST00000463687 PIP4K2AP48426 406 aaPredicted RBP8.62□□□□□ -1.03
VPS8-216ENST00000463687 ST13P50502 369 aaKnown RBP8.62□□□□□ -1.03
VPS8-216ENST00000463687 HNRNPUQ00839 825 aaKnown RBP eCLIP8.62□□□□□ -1.03
VPS8-216ENST00000463687 CLN3Q13286 438 aa8.62□□□□□ -1.03
VPS8-216ENST00000463687 CKAP2LQ8IYA6 745 aa8.62□□□□□ -1.03
VPS8-216ENST00000463687 C8orf58Q8NAV2 365 aa8.62□□□□□ -1.03
VPS8-216ENST00000463687 MRFAP1L1Q96HT8 127 aa8.62□□□□□ -1.03
VPS8-216ENST00000463687 PARP3Q9Y6F1 533 aa8.62□□□□□ -1.03
VPS8-216ENST00000463687 SCN11AQ9UI33 1791 aa8.62□□□□□ -1.03
VPS8-216ENST00000463687 COL15A1P39059 1388 aa8.61□□□□□ -1.03
VPS8-216ENST00000463687 USP42Q9H9J4 1324 aaKnown RBP8.61□□□□□ -1.03
VPS8-216ENST00000463687 ADH1AP07327 375 aa8.61□□□□□ -1.03
VPS8-216ENST00000463687 FGRP09769 529 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms