RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 BIN2Q9UBW5 565 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-204ENST00000463622 PLEKHG1Q9ULL1 1385 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 SETD1AO15047 1707 aaKnown RBP5.48□□□□□ -1.53
SCFD1-204ENST00000463622 SOWAHDA6NJG2 315 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 EIF1AYO14602 144 aaKnown RBP5.48□□□□□ -1.53
SCFD1-204ENST00000463622 MED26O95402 600 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 TGFB1P01137 390 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 CTSBP07858 339 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 SGO2Q562F6 1265 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 ANKRD34AQ69YU3 496 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 BEND4Q6ZU67 534 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 NBPF11Q86T75 865 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 LRRC59Q96AG4 307 aaKnown RBP5.48□□□□□ -1.53
SCFD1-204ENST00000463622 CLEC4MQ9H2X3 399 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-204ENST00000463622 COL16A1Q07092 1604 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-204ENST00000463622 EFCAB6Q5THR3 1501 aa5.47□□□□□ -1.53
SCFD1-204ENST00000463622 GAS2O43903 313 aaKnown RBP5.47□□□□□ -1.53
SCFD1-204ENST00000463622 ECEL1O95672 775 aa5.47□□□□□ -1.53
SCFD1-204ENST00000463622 ZNF157P51786 506 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-204ENST00000463622 EPS8L3Q8TE67 593 aaKnown RBP5.47□□□□□ -1.53
SCFD1-204ENST00000463622 CCDC74AQ96AQ1 378 aa5.47□□□□□ -1.53
SCFD1-204ENST00000463622 TMPRSS13Q9BYE2 586 aa5.47□□□□□ -1.53
SCFD1-204ENST00000463622 SETD5Q9C0A6 1442 aa5.47□□□□□ -1.53
SCFD1-204ENST00000463622 NWD1Q149M9 1564 aa5.47□□□□□ -1.53
SCFD1-204ENST00000463622 MAST1Q9Y2H9 1570 aa5.47□□□□□ -1.53
SCFD1-204ENST00000463622 PIK3R4Q99570 1358 aa5.47□□□□□ -1.53
SCFD1-204ENST00000463622 KIF15Q9NS87 1388 aa5.47□□□□□ -1.53
SCFD1-204ENST00000463622 MEGF11A6BM72 1044 aa5.46□□□□□ -1.53
SCFD1-204ENST00000463622 GADD45BO75293 160 aaPredicted RBP5.46□□□□□ -1.53
SCFD1-204ENST00000463622 MAOBP27338 520 aa5.46□□□□□ -1.53
SCFD1-204ENST00000463622 NFIAQ12857 509 aa5.46□□□□□ -1.53
SCFD1-204ENST00000463622 UVSSAQ2YD98 709 aa5.46□□□□□ -1.53
SCFD1-204ENST00000463622 KIAA0319Q5VV43 1072 aa5.46□□□□□ -1.53
SCFD1-204ENST00000463622 PI16Q6UXB8 463 aa5.46□□□□□ -1.53
SCFD1-204ENST00000463622 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.46□□□□□ -1.53
SCFD1-204ENST00000463622 RGS12O14924 1447 aa5.46□□□□□ -1.53
SCFD1-204ENST00000463622 ZFYVE9O95405 1425 aa5.46□□□□□ -1.53
SCFD1-204ENST00000463622 DUOX2Q9NRD8 1548 aa5.46□□□□□ -1.54
SCFD1-204ENST00000463622 MYOM3Q5VTT5 1437 aa5.46□□□□□ -1.54
SCFD1-204ENST00000463622 ERBINQ96RT1 1412 aa5.46□□□□□ -1.54
SCFD1-204ENST00000463622 NEFLP07196 543 aa5.46□□□□□ -1.54
SCFD1-204ENST00000463622 EXOSC6Q5RKV6 272 aaKnown RBP5.46□□□□□ -1.54
SCFD1-204ENST00000463622 CLEC10AQ8IUN9 316 aa5.46□□□□□ -1.54
SCFD1-204ENST00000463622 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.46□□□□□ -1.54
SCFD1-204ENST00000463622 FAM83CQ9BQN1 747 aa5.46□□□□□ -1.54
SCFD1-204ENST00000463622 NRSN2Q9GZP1 204 aa5.46□□□□□ -1.54
SCFD1-204ENST00000463622 SOX17Q9H6I2 414 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-204ENST00000463622 PCMTD2Q9NV79 361 aa5.46□□□□□ -1.54
SCFD1-204ENST00000463622 AHDC1Q5TGY3 1603 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-204ENST00000463622 LMTK2Q8IWU2 1503 aa5.45□□□□□ -1.54
SCFD1-204ENST00000463622 KANK1Q14678 1352 aa5.45□□□□□ -1.54
SCFD1-204ENST00000463622 ABCC5O15440 1437 aa5.45□□□□□ -1.54
SCFD1-204ENST00000463622 EIF2AK4Q9P2K8 1649 aaKnown RBP5.45□□□□□ -1.54
SCFD1-204ENST00000463622 MAP4P27816 1152 aaKnown RBP5.45□□□□□ -1.54
SCFD1-204ENST00000463622 PDE4CQ08493 712 aa5.45□□□□□ -1.54
SCFD1-204ENST00000463622 RNF43Q68DV7 783 aa5.45□□□□□ -1.54
SCFD1-204ENST00000463622 TMC7Q7Z402 723 aa5.45□□□□□ -1.54
SCFD1-204ENST00000463622 ZDHHC13Q8IUH4 622 aa5.45□□□□□ -1.54
SCFD1-204ENST00000463622 SHISA5Q8N114 240 aa5.45□□□□□ -1.54
SCFD1-204ENST00000463622 MFSD14AQ96MC6 490 aa5.45□□□□□ -1.54
SCFD1-204ENST00000463622 C8orf37Q96NL8 207 aa5.45□□□□□ -1.54
SCFD1-204ENST00000463622 CITED4Q96RK1 184 aa5.45□□□□□ -1.54
SCFD1-204ENST00000463622 CYP4F12Q9HCS2 524 aa5.45□□□□□ -1.54
SCFD1-204ENST00000463622 PHLPP1O60346 1717 aa5.45□□□□□ -1.54
SCFD1-204ENST00000463622 ADAMTS13Q76LX8 1427 aa5.45□□□□□ -1.54
SCFD1-204ENST00000463622 RRBP1Q9P2E9 1410 aaKnown RBP5.45□□□□□ -1.54
SCFD1-204ENST00000463622 POU4F3Q15319 338 aa5.44□□□□□ -1.54
SCFD1-204ENST00000463622 CDPF1Q6NVV7 123 aa5.44□□□□□ -1.54
SCFD1-204ENST00000463622 SMG8Q8ND04 991 aaKnown RBP5.44□□□□□ -1.54
SCFD1-204ENST00000463622 SHKBP1Q8TBC3 707 aa5.44□□□□□ -1.54
SCFD1-204ENST00000463622 FBLIM1Q8WUP2 373 aa5.44□□□□□ -1.54
SCFD1-204ENST00000463622 CSRNP1Q96S65 589 aa5.44□□□□□ -1.54
SCFD1-204ENST00000463622 TRIM56Q9BRZ2 755 aaKnown RBP5.44□□□□□ -1.54
SCFD1-204ENST00000463622 ZNF576Q9H609 170 aa5.44□□□□□ -1.54
SCFD1-204ENST00000463622 ABCB6Q9NP58 842 aa5.44□□□□□ -1.54
SCFD1-204ENST00000463622 PIK3C2BO00750 1634 aa5.44□□□□□ -1.54
SCFD1-204ENST00000463622 RIMS2Q9UQ26 1411 aa5.44□□□□□ -1.54
SCFD1-204ENST00000463622 TIAF1O95411 115 aa5.44□□□□□ -1.54
SCFD1-204ENST00000463622 NFKBIBQ15653 356 aa5.44□□□□□ -1.54
SCFD1-204ENST00000463622 AKAP4Q5JQC9 854 aa5.44□□□□□ -1.54
SCFD1-204ENST00000463622 FBXL6Q8N531 539 aa5.44□□□□□ -1.54
SCFD1-204ENST00000463622 RBCK1Q9BYM8 510 aa5.44□□□□□ -1.54
SCFD1-204ENST00000463622 ZC3H12CQ9C0D7 883 aaKnown RBP5.44□□□□□ -1.54
SCFD1-204ENST00000463622 TRPC5Q9UL62 973 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-204ENST00000463622 DIP2AQ14689 1571 aa5.44□□□□□ -1.54
SCFD1-204ENST00000463622 PNPLA6Q8IY17 1366 aa5.44□□□□□ -1.54
SCFD1-204ENST00000463622 KDM5AP29375 1690 aaKnown RBP5.43□□□□□ -1.54
SCFD1-204ENST00000463622 WDR64B1ANS9 1081 aa5.43□□□□□ -1.54
SCFD1-204ENST00000463622 GSC2O15499 205 aa5.43□□□□□ -1.54
SCFD1-204ENST00000463622 BRD1O95696 1058 aa5.43□□□□□ -1.54
SCFD1-204ENST00000463622 USP11P51784 963 aa5.43□□□□□ -1.54
SCFD1-204ENST00000463622 SOX4Q06945 474 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-204ENST00000463622 GRM2Q14416 872 aa5.43□□□□□ -1.54
SCFD1-204ENST00000463622 DBNDD2Q9BQY9 259 aa5.43□□□□□ -1.54
SCFD1-204ENST00000463622 SUGCTQ9HAC7 445 aa5.43□□□□□ -1.54
SCFD1-204ENST00000463622 PTPN23Q9H3S7 1636 aa5.43□□□□□ -1.54
SCFD1-204ENST00000463622 DCCP43146 1447 aa5.43□□□□□ -1.54
SCFD1-204ENST00000463622 TMEM238LA0A1B0GVL6 79 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 PRR19A6NJB7 356 aa5.42□□□□□ -1.54
SCFD1-204ENST00000463622 ITPKAP23677 461 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms