RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 RRP1BQ14684 758 aaKnown RBP18.86■□□□□ 0.61
CMSS1-202ENST00000463526 ATF7IPQ6VMQ6 1270 aa18.86■□□□□ 0.61
CMSS1-202ENST00000463526 OSBPL5Q9H0X9 879 aaPredicted RBP18.86■□□□□ 0.61
CMSS1-202ENST00000463526 NPM3O75607 178 aaKnown RBP18.85■□□□□ 0.61
CMSS1-202ENST00000463526 FARP2O94887 1054 aaPredicted RBP18.85■□□□□ 0.61
CMSS1-202ENST00000463526 INHAP05111 366 aa18.85■□□□□ 0.61
CMSS1-202ENST00000463526 ARID4AP29374 1257 aaPredicted RBP18.85■□□□□ 0.61
CMSS1-202ENST00000463526 HMGCS2P54868 508 aa18.85■□□□□ 0.61
CMSS1-202ENST00000463526 SH3RF3Q8TEJ3 882 aaPredicted RBP18.85■□□□□ 0.61
CMSS1-202ENST00000463526 COA7Q96BR5 231 aa18.85■□□□□ 0.61
CMSS1-202ENST00000463526 NOL10Q9BSC4 688 aaKnown RBP18.85■□□□□ 0.61
CMSS1-202ENST00000463526 HTATIP2Q9BUP3 242 aa18.85■□□□□ 0.61
CMSS1-202ENST00000463526 SGPL1O95470 568 aa18.84■□□□□ 0.61
CMSS1-202ENST00000463526 TFRCP02786 760 aaKnown RBP18.84■□□□□ 0.61
CMSS1-202ENST00000463526 UQCRFS1P1P0C7P4 283 aa18.84■□□□□ 0.61
CMSS1-202ENST00000463526 OS9Q13438 667 aaPredicted RBP18.84■□□□□ 0.61
CMSS1-202ENST00000463526 TTC39AQ5SRH9 613 aa18.84■□□□□ 0.61
CMSS1-202ENST00000463526 ZNF280CQ8ND82 737 aa18.84■□□□□ 0.61
CMSS1-202ENST00000463526 AATFQ9NY61 560 aaKnown RBP eCLIP18.84■□□□□ 0.61
CMSS1-202ENST00000463526 PNMA3Q9UL41 463 aa18.84■□□□□ 0.61
CMSS1-202ENST00000463526 TRIOBPQ9H2D6 2365 aa18.84■□□□□ 0.61
CMSS1-202ENST00000463526 CCER2I3L3R5 266 aa18.83■□□□□ 0.6
CMSS1-202ENST00000463526 CAP2P40123 477 aa18.83■□□□□ 0.6
CMSS1-202ENST00000463526 NAA16Q6N069 864 aaPredicted RBP18.83■□□□□ 0.6
CMSS1-202ENST00000463526 UBE2Q1Q7Z7E8 422 aa18.83■□□□□ 0.6
CMSS1-202ENST00000463526 TMEM57Q8N5G2 664 aa18.83■□□□□ 0.6
CMSS1-202ENST00000463526 DEFB118Q96PH6 123 aa18.83■□□□□ 0.6
CMSS1-202ENST00000463526 USP17L5A8MUK1 530 aa18.82■□□□□ 0.6
CMSS1-202ENST00000463526 MAP4K4O95819 1239 aaPredicted RBP18.82■□□□□ 0.6
CMSS1-202ENST00000463526 IRF5Q13568 498 aa18.82■□□□□ 0.6
CMSS1-202ENST00000463526 MAPKAPK5Q8IW41 473 aa18.82■□□□□ 0.6
CMSS1-202ENST00000463526 PROCA1Q8NCQ7 364 aaPredicted RBP18.82■□□□□ 0.6
CMSS1-202ENST00000463526 PXYLP1Q8TE99 480 aa18.82■□□□□ 0.6
CMSS1-202ENST00000463526 DBNDD2Q9BQY9 259 aa18.82■□□□□ 0.6
CMSS1-202ENST00000463526 RBM27Q9P2N5 1060 aaKnown RBP18.82■□□□□ 0.6
CMSS1-202ENST00000463526 DOCK1Q14185 1865 aa18.82■□□□□ 0.6
CMSS1-202ENST00000463526 FAM110CQ1W6H9 321 aa18.81■□□□□ 0.6
CMSS1-202ENST00000463526 CCDC158Q5M9N0 1113 aa18.81■□□□□ 0.6
CMSS1-202ENST00000463526 TGFBRAP1Q8WUH2 860 aa18.81■□□□□ 0.6
CMSS1-202ENST00000463526 C1orf115Q9H7X2 142 aa18.81■□□□□ 0.6
CMSS1-202ENST00000463526 NR2E3Q9Y5X4 410 aa18.81■□□□□ 0.6
CMSS1-202ENST00000463526 BAG3O95817 575 aa18.8■□□□□ 0.6
CMSS1-202ENST00000463526 PABPC4Q13310 644 aaKnown RBP eCLIP18.8■□□□□ 0.6
CMSS1-202ENST00000463526 TNNI3KQ59H18 835 aa18.8■□□□□ 0.6
CMSS1-202ENST00000463526 ASCC2Q9H1I8 757 aaPredicted RBP18.8■□□□□ 0.6
CMSS1-202ENST00000463526 AS3MTQ9HBK9 375 aa18.8■□□□□ 0.6
CMSS1-202ENST00000463526 PI4KBQ9UBF8 816 aa18.8■□□□□ 0.6
CMSS1-202ENST00000463526 HERC5Q9UII4 1024 aaKnown RBP18.8■□□□□ 0.6
CMSS1-202ENST00000463526 FPGT-TNNI3KV9GXZ4 949 aa18.8■□□□□ 0.6
CMSS1-202ENST00000463526 MGAMO43451 1857 aa18.8■□□□□ 0.6
CMSS1-202ENST00000463526 SURF6O75683 361 aaKnown RBP18.79■□□□□ 0.6
CMSS1-202ENST00000463526 GCLCP48506 637 aaPredicted RBP18.79■□□□□ 0.6
CMSS1-202ENST00000463526 ZKSCAN2Q63HK3 967 aa18.79■□□□□ 0.6
CMSS1-202ENST00000463526 TRIM34Q9BYJ4 488 aa18.79■□□□□ 0.6
CMSS1-202ENST00000463526 PHIPQ8WWQ0 1821 aa18.79■□□□□ 0.6
CMSS1-202ENST00000463526 PEX10O60683 326 aa18.78■□□□□ 0.6
CMSS1-202ENST00000463526 CYP2E1P05181 493 aaPredicted RBP18.78■□□□□ 0.6
CMSS1-202ENST00000463526 JAG1P78504 1218 aa18.78■□□□□ 0.6
CMSS1-202ENST00000463526 ATP8B2P98198 1209 aa18.78■□□□□ 0.6
CMSS1-202ENST00000463526 MTMR2Q13614 643 aa18.78■□□□□ 0.6
CMSS1-202ENST00000463526 POLA2Q14181 598 aa18.78■□□□□ 0.6
CMSS1-202ENST00000463526 SHROOM1Q2M3G4 852 aaPredicted RBP18.78■□□□□ 0.6
CMSS1-202ENST00000463526 ADGRA1Q86SQ6 560 aa18.78■□□□□ 0.6
CMSS1-202ENST00000463526 CRACR2BQ8N4Y2 399 aaPredicted RBP18.78■□□□□ 0.6
CMSS1-202ENST00000463526 TBC1D2Q9BYX2 928 aa18.78■□□□□ 0.6
CMSS1-202ENST00000463526 DHX36Q9H2U1 1008 aaKnown RBP18.78■□□□□ 0.6
CMSS1-202ENST00000463526 SAP30BPQ9UHR5 308 aaKnown RBP18.78■□□□□ 0.6
CMSS1-202ENST00000463526 PALD1Q9ULE6 856 aa18.78■□□□□ 0.6
CMSS1-202ENST00000463526 PTPRFP10586 1907 aa18.78■□□□□ 0.6
CMSS1-202ENST00000463526 ZBTB7BO15156 539 aaPredicted RBP18.77■□□□□ 0.6
CMSS1-202ENST00000463526 EVI5O60447 810 aa18.77■□□□□ 0.6
CMSS1-202ENST00000463526 GDF11O95390 407 aa18.77■□□□□ 0.6
CMSS1-202ENST00000463526 PLCG2P16885 1265 aa18.77■□□□□ 0.6
CMSS1-202ENST00000463526 ZAP70P43403 619 aa18.77■□□□□ 0.6
CMSS1-202ENST00000463526 IRX3P78415 501 aaPredicted RBP18.77■□□□□ 0.6
CMSS1-202ENST00000463526 SH3D19Q5HYK7 790 aa18.77■□□□□ 0.6
CMSS1-202ENST00000463526 PAWRQ96IZ0 340 aaKnown RBP18.77■□□□□ 0.6
CMSS1-202ENST00000463526 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.77■□□□□ 0.6
CMSS1-202ENST00000463526 GPR108Q9NPR9 543 aa18.77■□□□□ 0.6
CMSS1-202ENST00000463526 PIH1D3Q9NQM4 214 aaKnown RBP18.77■□□□□ 0.6
CMSS1-202ENST00000463526 PAK6Q9NQU5 681 aaPredicted RBP18.77■□□□□ 0.6
CMSS1-202ENST00000463526 TMOD4Q9NZQ9 345 aa18.77■□□□□ 0.6
CMSS1-202ENST00000463526 COL2A1P02458 1487 aaPredicted RBP18.77■□□□□ 0.59
CMSS1-202ENST00000463526 DOCK3Q8IZD9 2030 aa18.76■□□□□ 0.59
CMSS1-202ENST00000463526 PPP4CP60510 307 aa18.76■□□□□ 0.59
CMSS1-202ENST00000463526 DYNLL1P63167 89 aaKnown RBP18.76■□□□□ 0.59
CMSS1-202ENST00000463526 TRIM32Q13049 653 aa18.76■□□□□ 0.59
CMSS1-202ENST00000463526 SSH3Q8TE77 659 aa18.76■□□□□ 0.59
CMSS1-202ENST00000463526 DIS3LQ8TF46 1054 aaKnown RBP18.76■□□□□ 0.59
CMSS1-202ENST00000463526 P2RX7Q99572 595 aaKnown RBP18.76■□□□□ 0.59
CMSS1-202ENST00000463526 WDR18Q9BV38 432 aa18.76■□□□□ 0.59
CMSS1-202ENST00000463526 CCDC8Q9H0W5 538 aaPredicted RBP18.76■□□□□ 0.59
CMSS1-202ENST00000463526 DNAJC18Q9H819 358 aa18.76■□□□□ 0.59
CMSS1-202ENST00000463526 FLT1P17948 1338 aa18.75■□□□□ 0.59
CMSS1-202ENST00000463526 ASNSP08243 561 aa18.75■□□□□ 0.59
CMSS1-202ENST00000463526 CYP2B6P20813 491 aa18.75■□□□□ 0.59
CMSS1-202ENST00000463526 CYP7A1P22680 504 aa18.75■□□□□ 0.59
CMSS1-202ENST00000463526 BACE1P56817 501 aa18.75■□□□□ 0.59
CMSS1-202ENST00000463526 FOXP4Q8IVH2 680 aaPredicted RBP18.75■□□□□ 0.59
CMSS1-202ENST00000463526 TLR7Q9NYK1 1049 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms