RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 ZSCAN10Q96SZ4 725 aaPredicted RBP11.83□□□□□ -0.52
MSH5-211ENST00000463144 UBAC1Q9BSL1 405 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 PODXL2Q9NZ53 605 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 MKRN1Q9UHC7 482 aaKnown RBP11.83□□□□□ -0.52
MSH5-211ENST00000463144 GGA1Q9UJY5 639 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 LTBP1Q14766 1721 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 LRRC37AA6NMS7 1700 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 APBA3O96018 575 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 IL1R1P14778 569 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 SSRP1Q08945 709 aaKnown RBP11.83□□□□□ -0.52
MSH5-211ENST00000463144 SNW1Q13573 536 aaKnown RBP11.83□□□□□ -0.52
MSH5-211ENST00000463144 DIXDC1Q155Q3 683 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 RTN1Q16799 776 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 SBK1Q52WX2 424 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 CCAR1Q8IX12 1150 aaKnown RBP11.83□□□□□ -0.52
MSH5-211ENST00000463144 CKAP2LQ8IYA6 745 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 FANCBQ8NB91 859 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 TBC1D16Q8TBP0 767 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 TNMDQ9H2S6 317 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 TAOK2Q9UL54 1235 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 PCDHA7Q9UN72 937 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 NRXN2Q9P2S2 1712 aa11.82□□□□□ -0.52
MSH5-211ENST00000463144 USP17L8P0C7I0 530 aa11.82□□□□□ -0.52
MSH5-211ENST00000463144 UVSSAQ2YD98 709 aa11.82□□□□□ -0.52
MSH5-211ENST00000463144 CRACR2BQ8N4Y2 399 aaPredicted RBP11.82□□□□□ -0.52
MSH5-211ENST00000463144 ENGASEQ8NFI3 743 aa11.82□□□□□ -0.52
MSH5-211ENST00000463144 SH3RF3Q8TEJ3 882 aaPredicted RBP11.82□□□□□ -0.52
MSH5-211ENST00000463144 TRIM44Q96DX7 344 aaPredicted RBP11.82□□□□□ -0.52
MSH5-211ENST00000463144 POLR3EQ9NVU0 708 aa11.82□□□□□ -0.52
MSH5-211ENST00000463144 ORC4O43929 436 aa11.81□□□□□ -0.52
MSH5-211ENST00000463144 PCP11498 1178 aaKnown RBP11.81□□□□□ -0.52
MSH5-211ENST00000463144 ME1P48163 572 aa11.81□□□□□ -0.52
MSH5-211ENST00000463144 RCAN1P53805 252 aa11.81□□□□□ -0.52
MSH5-211ENST00000463144 CCDC82Q8N4S0 544 aa11.81□□□□□ -0.52
MSH5-211ENST00000463144 NUP133Q8WUM0 1156 aa11.81□□□□□ -0.52
MSH5-211ENST00000463144 IGSF3O75054 1194 aa11.81□□□□□ -0.52
MSH5-211ENST00000463144 YEATS4O95619 227 aa11.81□□□□□ -0.52
MSH5-211ENST00000463144 CCDC192P0DO97 292 aa11.81□□□□□ -0.52
MSH5-211ENST00000463144 U2AF2P26368 475 aaKnown RBP eCLIP11.81□□□□□ -0.528e-8■■■■□ 26.3
MSH5-211ENST00000463144 ARPP21Q9UBL0 812 aaPredicted RBP11.81□□□□□ -0.52
MSH5-211ENST00000463144 MRVI1Q9Y6F6 885 aa11.81□□□□□ -0.52
MSH5-211ENST00000463144 NMT2O60551 498 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 PPP4CP60510 307 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 TYRO3Q06418 890 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 SLC4A8Q2Y0W8 1093 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 FAM47AQ5JRC9 791 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 ADALQ6DHV7 355 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 NLGN1Q8N2Q7 840 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.8□□□□□ -0.52
MSH5-211ENST00000463144 CDK5RAP2Q96SN8 1893 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 ESPNB1AK53 854 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 FUT2Q10981 343 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 TROAPQ12815 778 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 STK38Q15208 465 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 IFIT1BQ5T764 474 aaKnown RBP11.8□□□□□ -0.52
MSH5-211ENST00000463144 C12orf60Q5U649 245 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 ANO1Q5XXA6 986 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 SP8Q8IXZ3 490 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 FSIP1Q8NA03 581 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 SHISA4Q96DD7 197 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 RTFDC1Q9BY42 306 aaPredicted RBP11.8□□□□□ -0.52
MSH5-211ENST00000463144 MCM9Q9NXL9 1143 aa11.8□□□□□ -0.52
MSH5-211ENST00000463144 MROH7-TTC4A0A0A0MT08 1334 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 MYH6P13533 1939 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 CCDC196A0A1B0GTZ2 297 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 PPEF1O14829 653 aaPredicted RBP11.79□□□□□ -0.52
MSH5-211ENST00000463144 SPTLC2O15270 562 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 AP5Z1O43299 807 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 SRGNP10124 158 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 GSTO1P78417 241 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 OLFM4Q6UX06 510 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 IQCA1Q86XH1 822 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 KCNJ14Q9UNX9 436 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 A0A1W2PQ27 194 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 A0A1W2PQ64 194 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 A0A1W2PQD8 194 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 C6orf229H3BNL8 230 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 DEXIO95424 95 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 USP5P45974 858 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 FAM160A1Q05DH4 1040 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 TRIM29Q14134 588 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 SLC39A14Q15043 492 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 AXDND1Q5T1B0 1012 aaPredicted RBP11.79□□□□□ -0.52
MSH5-211ENST00000463144 FMR1NBQ8N0W7 255 aaPredicted RBP11.79□□□□□ -0.52
MSH5-211ENST00000463144 KCNG4Q8TDN1 519 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 WASF1Q92558 559 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 DYNLL2Q96FJ2 89 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 MAP3K14Q99558 947 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 USP25Q9UHP3 1055 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 ATP6V0A2Q9Y487 856 aa11.79□□□□□ -0.52
MSH5-211ENST00000463144 COL11A2P13942 1736 aaPredicted RBP11.78□□□□□ -0.52
MSH5-211ENST00000463144 A0A1B0GVL5 298 aa11.78□□□□□ -0.52
MSH5-211ENST00000463144 BTBD18B2RXH4 712 aa11.78□□□□□ -0.52
MSH5-211ENST00000463144 WDHD1O75717 1129 aaPredicted RBP11.78□□□□□ -0.52
MSH5-211ENST00000463144 PLEKHA8P1O95397 391 aa11.78□□□□□ -0.52
MSH5-211ENST00000463144 MMP1P03956 469 aa11.78□□□□□ -0.52
MSH5-211ENST00000463144 LDHCP07864 332 aa11.78□□□□□ -0.52
MSH5-211ENST00000463144 HMGB2P26583 209 aaKnown RBP11.78□□□□□ -0.52
MSH5-211ENST00000463144 PPP2R5BQ15173 497 aa11.78□□□□□ -0.52
MSH5-211ENST00000463144 PTPAQ15257 358 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms