RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 TNFRSF10CO14798 259 aa7.9□□□□□ -1.14
COPS3-205ENST00000463097 PDE4BQ07343 736 aa7.9□□□□□ -1.14
COPS3-205ENST00000463097 CDCP2Q5VXM1 449 aa7.9□□□□□ -1.14
COPS3-205ENST00000463097 THNSL2Q86YJ6 484 aa7.9□□□□□ -1.14
COPS3-205ENST00000463097 JAMLQ86YT9 394 aa7.9□□□□□ -1.14
COPS3-205ENST00000463097 CHAC2Q8WUX2 184 aa7.9□□□□□ -1.14
COPS3-205ENST00000463097 JDP2Q8WYK2 163 aa7.9□□□□□ -1.14
COPS3-205ENST00000463097 SLC9A7Q96T83 725 aa7.9□□□□□ -1.14
COPS3-205ENST00000463097 CORO1BQ9BR76 489 aa7.9□□□□□ -1.14
COPS3-205ENST00000463097 DNAJA2O60884 412 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 ECEL1O95672 775 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 MYCLP1P12525 358 aaPredicted RBP7.89□□□□□ -1.15
COPS3-205ENST00000463097 CDC25BP30305 580 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 ARL4DP49703 201 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 EVA1CP58658 441 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 SLC7A5Q01650 507 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 C19orf57Q0VDD7 668 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 POU4F3Q15319 338 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 TMEM201Q5SNT2 666 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 ODR4Q5SWX8 454 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 PSAPL1Q6NUJ1 521 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 CYFIP1Q7L576 1253 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 CERS3Q8IU89 383 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 FMNL3Q8IVF7 1028 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 SLC7A3Q8WY07 619 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 KLHL6Q8WZ60 621 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 ELMO3Q96BJ8 720 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 CCDC86Q9H6F5 360 aaKnown RBP7.89□□□□□ -1.15
COPS3-205ENST00000463097 KLF15Q9UIH9 416 aa7.89□□□□□ -1.15
COPS3-205ENST00000463097 KCNQ2O43526 872 aa7.88□□□□□ -1.15
COPS3-205ENST00000463097 RFPL3O75679 317 aa7.88□□□□□ -1.15
COPS3-205ENST00000463097 POU3F3P20264 500 aaPredicted RBP7.88□□□□□ -1.15
COPS3-205ENST00000463097 STAT3P40763 770 aa7.88□□□□□ -1.15
COPS3-205ENST00000463097 CDKN1CP49918 316 aaPredicted RBP7.88□□□□□ -1.15
COPS3-205ENST00000463097 PABPC4Q13310 644 aaKnown RBP eCLIP7.88□□□□□ -1.151e-8■■■■□ 21.2
COPS3-205ENST00000463097 SGSM3Q96HU1 749 aa7.88□□□□□ -1.15
COPS3-205ENST00000463097 CAAP1Q9H8G2 361 aa7.88□□□□□ -1.15
COPS3-205ENST00000463097 A0A087X0B3 334 aa7.87□□□□□ -1.15
COPS3-205ENST00000463097 FAM86C2PA6NEL3 165 aa7.87□□□□□ -1.15
COPS3-205ENST00000463097 IRS4O14654 1257 aaPredicted RBP7.87□□□□□ -1.15
COPS3-205ENST00000463097 ZNF862O60290 1169 aa7.87□□□□□ -1.15
COPS3-205ENST00000463097 RGS9O75916 674 aaPredicted RBP7.87□□□□□ -1.15
COPS3-205ENST00000463097 MAOBP27338 520 aa7.87□□□□□ -1.15
COPS3-205ENST00000463097 PIP4K2BP78356 416 aa7.87□□□□□ -1.15
COPS3-205ENST00000463097 EXOSC10Q01780 885 aaKnown RBP7.87□□□□□ -1.15
COPS3-205ENST00000463097 CBX2Q14781 532 aaPredicted RBP7.87□□□□□ -1.15
COPS3-205ENST00000463097 GNPTABQ3T906 1256 aa7.87□□□□□ -1.15
COPS3-205ENST00000463097 IL22RA1Q8N6P7 574 aa7.87□□□□□ -1.15
COPS3-205ENST00000463097 WNT8BQ93098 351 aa7.87□□□□□ -1.15
COPS3-205ENST00000463097 MDFIQ99750 246 aa7.87□□□□□ -1.15
COPS3-205ENST00000463097 FAM126AQ9BYI3 521 aaPredicted RBP7.87□□□□□ -1.15
COPS3-205ENST00000463097 NRSN2Q9GZP1 204 aa7.87□□□□□ -1.15
COPS3-205ENST00000463097 AAASQ9NRG9 546 aa7.87□□□□□ -1.15
COPS3-205ENST00000463097 KLHL3Q9UH77 587 aa7.87□□□□□ -1.15
COPS3-205ENST00000463097 ADAM30Q9UKF2 790 aa7.87□□□□□ -1.15
COPS3-205ENST00000463097 ZNF214Q9UL59 606 aaPredicted RBP7.87□□□□□ -1.15
COPS3-205ENST00000463097 CDC14CA4D256 554 aa7.86□□□□□ -1.15
COPS3-205ENST00000463097 DCDC2CA8MYV0 355 aa7.86□□□□□ -1.15
COPS3-205ENST00000463097 CHURC1-FNTBB4DL54 471 aa7.86□□□□□ -1.15
COPS3-205ENST00000463097 AGRPO00253 132 aa7.86□□□□□ -1.15
COPS3-205ENST00000463097 ARAFP10398 606 aa7.86□□□□□ -1.15
COPS3-205ENST00000463097 ADH6P28332 368 aa7.86□□□□□ -1.15
COPS3-205ENST00000463097 L1CAMP32004 1257 aa7.86□□□□□ -1.15
COPS3-205ENST00000463097 HNRNPUQ00839 825 aaKnown RBP eCLIP7.86□□□□□ -1.15
COPS3-205ENST00000463097 FAM117BQ6P1L5 589 aa7.86□□□□□ -1.15
COPS3-205ENST00000463097 VWA5B2Q8N398 1253 aa7.86□□□□□ -1.15
COPS3-205ENST00000463097 OSGEPQ9NPF4 335 aa7.86□□□□□ -1.15
COPS3-205ENST00000463097 LINC01387J3KSC0 135 aa7.85□□□□□ -1.15
COPS3-205ENST00000463097 ST8SIA5O15466 376 aa7.85□□□□□ -1.15
COPS3-205ENST00000463097 PGRP06401 933 aa7.85□□□□□ -1.15
COPS3-205ENST00000463097 GRK4P32298 578 aa7.85□□□□□ -1.15
COPS3-205ENST00000463097 SOX5P35711 763 aa7.85□□□□□ -1.15
COPS3-205ENST00000463097 PDE3AQ14432 1141 aa7.85□□□□□ -1.15
COPS3-205ENST00000463097 BRDTQ58F21 947 aaPredicted RBP7.85□□□□□ -1.15
COPS3-205ENST00000463097 CT47A1Q5JQC4 288 aaPredicted RBP7.85□□□□□ -1.15
COPS3-205ENST00000463097 FOXB2Q5VYV0 432 aa7.85□□□□□ -1.15
COPS3-205ENST00000463097 TXNDC11Q6PKC3 985 aa7.85□□□□□ -1.15
COPS3-205ENST00000463097 SV2AQ7L0J3 742 aa7.85□□□□□ -1.15
COPS3-205ENST00000463097 C12orf40Q86WS4 652 aa7.85□□□□□ -1.15
COPS3-205ENST00000463097 DDX42Q86XP3 938 aaKnown RBP eCLIP7.85□□□□□ -1.15
COPS3-205ENST00000463097 KISS1RQ969F8 398 aaPredicted RBP7.85□□□□□ -1.15
COPS3-205ENST00000463097 KIFC2Q96AC6 838 aa7.85□□□□□ -1.15
COPS3-205ENST00000463097 WDR89Q96FK6 387 aaPredicted RBP7.85□□□□□ -1.15
COPS3-205ENST00000463097 KIF2CQ99661 725 aa7.85□□□□□ -1.15
COPS3-205ENST00000463097 DHRS4Q9BTZ2 278 aa7.85□□□□□ -1.15
COPS3-205ENST00000463097 SENP2Q9HC62 589 aa7.85□□□□□ -1.15
COPS3-205ENST00000463097 NCOA5Q9HCD5 579 aaKnown RBP7.85□□□□□ -1.15
COPS3-205ENST00000463097 DACH1Q9UI36 760 aa7.85□□□□□ -1.15
COPS3-205ENST00000463097 ELOA3CA0A087WX78 387 aaPredicted RBP7.84□□□□□ -1.15
COPS3-205ENST00000463097 PRAMEF27A3QJZ7 478 aa7.84□□□□□ -1.15
COPS3-205ENST00000463097 ELOA3DA6NLF2 546 aaPredicted RBP7.84□□□□□ -1.15
COPS3-205ENST00000463097 PLD2O14939 933 aa7.84□□□□□ -1.15
COPS3-205ENST00000463097 PDE8AO60658 829 aa7.84□□□□□ -1.15
COPS3-205ENST00000463097 RGS20O76081 388 aa7.84□□□□□ -1.15
COPS3-205ENST00000463097 MAP4K4O95819 1239 aaPredicted RBP7.84□□□□□ -1.15
COPS3-205ENST00000463097 RAG1P15918 1043 aa7.84□□□□□ -1.15
COPS3-205ENST00000463097 LIG1P18858 919 aa7.84□□□□□ -1.15
COPS3-205ENST00000463097 NFKB2Q00653 900 aa7.84□□□□□ -1.15
COPS3-205ENST00000463097 GRIK5Q16478 980 aa7.84□□□□□ -1.15
COPS3-205ENST00000463097 KIF4BQ2VIQ3 1234 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms