RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 EVI5O60447 810 aa19.47■□□□□ 0.71
SND1-203ENST00000463020 JAG1P78504 1218 aa19.47■□□□□ 0.71
SND1-203ENST00000463020 SHROOM1Q2M3G4 852 aaPredicted RBP19.47■□□□□ 0.71
SND1-203ENST00000463020 PDS5AQ29RF7 1337 aaKnown RBP19.47■□□□□ 0.71
SND1-203ENST00000463020 LAMA2P24043 3122 aaKnown RBP19.47■□□□□ 0.71
SND1-203ENST00000463020 PLXNB2O15031 1838 aa19.46■□□□□ 0.71
SND1-203ENST00000463020 SIPA1L1O43166 1804 aa19.46■□□□□ 0.71
SND1-203ENST00000463020 SPP2Q13103 211 aa19.46■□□□□ 0.71
SND1-203ENST00000463020 TRMT2AQ8IZ69 625 aaKnown RBP19.46■□□□□ 0.71
SND1-203ENST00000463020 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.46■□□□□ 0.71
SND1-203ENST00000463020 HMG20BQ9P0W2 317 aa19.46■□□□□ 0.71
SND1-203ENST00000463020 HMGCS2P54868 508 aa19.45■□□□□ 0.7
SND1-203ENST00000463020 FAM110CQ1W6H9 321 aa19.45■□□□□ 0.7
SND1-203ENST00000463020 ZGPATQ8N5A5 531 aaKnown RBP19.45■□□□□ 0.7
SND1-203ENST00000463020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.45■□□□□ 0.7
SND1-203ENST00000463020 GJD2Q9UKL4 321 aa19.45■□□□□ 0.7
SND1-203ENST00000463020 ATAD5Q96QE3 1844 aa19.45■□□□□ 0.7
SND1-203ENST00000463020 UNC80Q8N2C7 3258 aa19.45■□□□□ 0.7
SND1-203ENST00000463020 TBC1D12O60347 775 aa19.44■□□□□ 0.7
SND1-203ENST00000463020 NSUN4Q96CB9 384 aaKnown RBP19.44■□□□□ 0.7
SND1-203ENST00000463020 ZMYND8Q9ULU4 1186 aaPredicted RBP19.44■□□□□ 0.7
SND1-203ENST00000463020 TNNQ9UQP3 1299 aa19.44■□□□□ 0.7
SND1-203ENST00000463020 DNAH12Q6ZR08 3092 aa19.44■□□□□ 0.7
SND1-203ENST00000463020 C7orf61Q8IZ16 206 aa19.43■□□□□ 0.7
SND1-203ENST00000463020 COA7Q96BR5 231 aa19.43■□□□□ 0.7
SND1-203ENST00000463020 OSBPL5Q9H0X9 879 aaPredicted RBP19.43■□□□□ 0.7
SND1-203ENST00000463020 ASCC2Q9H1I8 757 aaPredicted RBP19.43■□□□□ 0.7
SND1-203ENST00000463020 POTEEQ6S8J3 1075 aa19.42■□□□□ 0.7
SND1-203ENST00000463020 ERICH6Q7L0X2 663 aa19.42■□□□□ 0.7
SND1-203ENST00000463020 PROCA1Q8NCQ7 364 aaPredicted RBP19.42■□□□□ 0.7
SND1-203ENST00000463020 ZNF280CQ8ND82 737 aa19.42■□□□□ 0.7
SND1-203ENST00000463020 SH3RF3Q8TEJ3 882 aaPredicted RBP19.42■□□□□ 0.7
SND1-203ENST00000463020 TRIB2Q92519 343 aa19.42■□□□□ 0.7
SND1-203ENST00000463020 GDF15Q99988 308 aa19.42■□□□□ 0.7
SND1-203ENST00000463020 DDX60LQ5H9U9 1706 aaKnown RBP19.42■□□□□ 0.7
SND1-203ENST00000463020 SRGAP3O43295 1099 aa19.41■□□□□ 0.7
SND1-203ENST00000463020 SYN1P17600 705 aa19.41■□□□□ 0.7
SND1-203ENST00000463020 CAP2P40123 477 aa19.41■□□□□ 0.7
SND1-203ENST00000463020 SPTY2D1Q68D10 685 aaPredicted RBP19.41■□□□□ 0.7
SND1-203ENST00000463020 SPATA5Q8NB90 893 aa19.41■□□□□ 0.7
SND1-203ENST00000463020 DNAJC18Q9H819 358 aa19.41■□□□□ 0.7
SND1-203ENST00000463020 TXNRD2Q9NNW7 524 aa19.41■□□□□ 0.7
SND1-203ENST00000463020 COL2A1P02458 1487 aaPredicted RBP19.41■□□□□ 0.7
SND1-203ENST00000463020 NPM3O75607 178 aaKnown RBP19.4■□□□□ 0.7
SND1-203ENST00000463020 HMGCRP04035 888 aa19.4■□□□□ 0.7
SND1-203ENST00000463020 MCAMP43121 646 aa19.4■□□□□ 0.7
SND1-203ENST00000463020 SLF2Q8IX21 1173 aa19.4■□□□□ 0.7
SND1-203ENST00000463020 SLC17A8Q8NDX2 589 aa19.4■□□□□ 0.7
SND1-203ENST00000463020 NEUROD6Q96NK8 337 aa19.4■□□□□ 0.7
SND1-203ENST00000463020 A0A1W2PPC1 479 aa19.39■□□□□ 0.69
SND1-203ENST00000463020 MVPQ14764 893 aaKnown RBP19.39■□□□□ 0.69
SND1-203ENST00000463020 SH3D19Q5HYK7 790 aa19.39■□□□□ 0.69
SND1-203ENST00000463020 Q7L0L9 218 aa19.39■□□□□ 0.69
SND1-203ENST00000463020 NECAB2Q7Z6G3 386 aa19.39■□□□□ 0.69
SND1-203ENST00000463020 ADGRA1Q86SQ6 560 aa19.39■□□□□ 0.69
SND1-203ENST00000463020 PNMA3Q9UL41 463 aa19.39■□□□□ 0.69
SND1-203ENST00000463020 CUL9Q8IWT3 2517 aa19.39■□□□□ 0.69
SND1-203ENST00000463020 DLL1O00548 723 aa19.38■□□□□ 0.69
SND1-203ENST00000463020 PFASO15067 1338 aa19.38■□□□□ 0.69
SND1-203ENST00000463020 ARID4AP29374 1257 aaPredicted RBP19.38■□□□□ 0.69
SND1-203ENST00000463020 MTX1Q13505 466 aa19.38■□□□□ 0.69
SND1-203ENST00000463020 MTMR2Q13614 643 aa19.38■□□□□ 0.69
SND1-203ENST00000463020 TEX11Q8IYF3 940 aa19.38■□□□□ 0.69
SND1-203ENST00000463020 API5Q9BZZ5 524 aaKnown RBP19.38■□□□□ 0.69
SND1-203ENST00000463020 RAI14Q9P0K7 980 aa19.38■□□□□ 0.69
SND1-203ENST00000463020 EYSQ5T1H1 3165 aa19.37■□□□□ 0.69
SND1-203ENST00000463020 PNMA6EA0A0J9YXQ4 647 aa19.37■□□□□ 0.69
SND1-203ENST00000463020 USP17L5A8MUK1 530 aa19.37■□□□□ 0.69
SND1-203ENST00000463020 CYP2B6P20813 491 aa19.37■□□□□ 0.69
SND1-203ENST00000463020 GCLCP48506 637 aaPredicted RBP19.37■□□□□ 0.69
SND1-203ENST00000463020 RARSP54136 660 aaKnown RBP19.37■□□□□ 0.69
SND1-203ENST00000463020 P2RX7Q99572 595 aaKnown RBP19.37■□□□□ 0.69
SND1-203ENST00000463020 SNRKQ9NRH2 765 aa19.37■□□□□ 0.69
SND1-203ENST00000463020 MORF4L1Q9UBU8 362 aa19.37■□□□□ 0.69
SND1-203ENST00000463020 RPTORQ8N122 1335 aa19.36■□□□□ 0.69
SND1-203ENST00000463020 MAGEA10P43363 369 aaPredicted RBP19.36■□□□□ 0.69
SND1-203ENST00000463020 MAP3K21Q5TCX8 1036 aa19.36■□□□□ 0.69
SND1-203ENST00000463020 AKAP2Q9Y2D5 859 aa19.36■□□□□ 0.69
SND1-203ENST00000463020 CDK5RAP2Q96SN8 1893 aa19.35■□□□□ 0.69
SND1-203ENST00000463020 GDF11O95390 407 aa19.35■□□□□ 0.69
SND1-203ENST00000463020 PRKAR2AP13861 404 aaKnown RBP19.35■□□□□ 0.69
SND1-203ENST00000463020 CCL14Q16627 93 aa19.35■□□□□ 0.69
SND1-203ENST00000463020 Q3C1V9 767 aa19.35■□□□□ 0.69
SND1-203ENST00000463020 MAPKAPK5Q8IW41 473 aa19.35■□□□□ 0.69
SND1-203ENST00000463020 C11orf49Q9H6J7 331 aa19.35■□□□□ 0.69
SND1-203ENST00000463020 HMX1Q9NP08 348 aaPredicted RBP19.35■□□□□ 0.69
SND1-203ENST00000463020 AATFQ9NY61 560 aaKnown RBP eCLIP19.35■□□□□ 0.69
SND1-203ENST00000463020 OGDHLQ9ULD0 1010 aa19.35■□□□□ 0.69
SND1-203ENST00000463020 BMP8BP34820 402 aa19.34■□□□□ 0.69
SND1-203ENST00000463020 GSTO1P78417 241 aa19.34■□□□□ 0.69
SND1-203ENST00000463020 ANKLE1Q8NAG6 615 aa19.34■□□□□ 0.69
SND1-203ENST00000463020 WDR18Q9BV38 432 aa19.34■□□□□ 0.69
SND1-203ENST00000463020 NBPF3Q9H094 633 aa19.34■□□□□ 0.69
SND1-203ENST00000463020 PORCNQ9H237 461 aa19.34■□□□□ 0.69
SND1-203ENST00000463020 RBPJLQ9UBG7 517 aa19.34■□□□□ 0.69
SND1-203ENST00000463020 MAST2Q6P0Q8 1798 aa19.34■□□□□ 0.69
SND1-203ENST00000463020 FLT1P17948 1338 aa19.33■□□□□ 0.69
SND1-203ENST00000463020 CCND3P30281 292 aaPredicted RBP19.33■□□□□ 0.68
SND1-203ENST00000463020 BACE1P56817 501 aa19.33■□□□□ 0.68
SND1-203ENST00000463020 HERVK_113P62684 666 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms