RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 ZNF669Q96BR6 464 aaPredicted RBP5.3□□□□□ -1.56
GPNMB-205ENST00000463011 SOX17Q9H6I2 414 aaPredicted RBP5.3□□□□□ -1.56
GPNMB-205ENST00000463011 CNNM2Q9H8M5 875 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 SENP2Q9HC62 589 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 AVENQ9NQS1 362 aaPredicted RBP5.3□□□□□ -1.56
GPNMB-205ENST00000463011 GMIPQ9P107 970 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 CHPF2Q9P2E5 772 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 KLHL3Q9UH77 587 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 PPME1Q9Y570 386 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 CSADQ9Y600 493 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 NEURL1BA8MQ27 555 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 CHURC1-FNTBB4DL54 471 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 SUSD5O60279 629 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 ZNF862O60290 1169 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 S100BP04271 92 aaPredicted RBP5.29□□□□□ -1.56
GPNMB-205ENST00000463011 CTSBP07858 339 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 VIL1P09327 827 aaKnown RBP5.29□□□□□ -1.56
GPNMB-205ENST00000463011 PDGFRBP09619 1106 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 MYCLP1P12525 358 aaPredicted RBP5.29□□□□□ -1.56
GPNMB-205ENST00000463011 MX2P20592 715 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 CNGA1P29973 690 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 PDE4BQ07343 736 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 PDE3AQ14432 1141 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 CBX2Q14781 532 aaPredicted RBP5.29□□□□□ -1.56
GPNMB-205ENST00000463011 SLC10A6Q3KNW5 377 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 GNPTABQ3T906 1256 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 KRT26Q7Z3Y9 468 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 C12orf40Q86WS4 652 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 CACTIN-AS1Q8N1I8 211 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 ZBTB38Q8NAP3 1195 aaPredicted RBP5.29□□□□□ -1.56
GPNMB-205ENST00000463011 KIFC2Q96AC6 838 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 WDR89Q96FK6 387 aaPredicted RBP5.29□□□□□ -1.56
GPNMB-205ENST00000463011 PHAXQ9H814 394 aaKnown RBP5.29□□□□□ -1.56
GPNMB-205ENST00000463011 KRT82Q9NSB4 513 aa5.29□□□□□ -1.56
GPNMB-205ENST00000463011 PRAMEF27A3QJZ7 478 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 ADCY3O60266 1144 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 PGRP06401 933 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 ARAFP10398 606 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 L1CAMP32004 1257 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 PIP4K2BP78356 416 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 SLC7A5Q01650 507 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 GRIK5Q16478 980 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 TMEM67Q5HYA8 995 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 CCDC181Q5TID7 509 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 CDCP2Q5VXM1 449 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 FOXB2Q5VYV0 432 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 FAM117BQ6P1L5 589 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 CYFIP1Q7L576 1253 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 FERMT3Q86UX7 667 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 FCHSD1Q86WN1 690 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 JAMLQ86YT9 394 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 KLHL6Q8WZ60 621 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 SLC26A8Q96RN1 970 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 IER2Q9BTL4 223 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 CARD10Q9BWT7 1032 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 FAM126AQ9BYI3 521 aaPredicted RBP5.28□□□□□ -1.56
GPNMB-205ENST00000463011 PLAAQ9Y263 795 aa5.28□□□□□ -1.56
GPNMB-205ENST00000463011 ELOA3CA0A087WX78 387 aaPredicted RBP5.27□□□□□ -1.57
GPNMB-205ENST00000463011 ELOA3DA6NLF2 546 aaPredicted RBP5.27□□□□□ -1.57
GPNMB-205ENST00000463011 IRS4O14654 1257 aaPredicted RBP5.27□□□□□ -1.57
GPNMB-205ENST00000463011 TNFRSF10CO14798 259 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 FSCN2O14926 492 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 SNRPBP14678 240 aaKnown RBP5.27□□□□□ -1.57
GPNMB-205ENST00000463011 RAG1P15918 1043 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 ALAS2P22557 587 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 POLR2BP30876 1174 aaKnown RBP5.27□□□□□ -1.57
GPNMB-205ENST00000463011 GRK4P32298 578 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 BAG6P46379 1132 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 ELOA3BQ3SY89 546 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 TM4SF20Q53R12 229 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 TMEM201Q5SNT2 666 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 NIM1KQ8IY84 436 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 LRRC47Q8N1G4 583 aaKnown RBP5.27□□□□□ -1.57
GPNMB-205ENST00000463011 UBR7Q8N806 425 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 PRPF38AQ8NAV1 312 aaKnown RBP5.27□□□□□ -1.57
GPNMB-205ENST00000463011 ELOA3Q8NG57 546 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 NINJ1Q92982 152 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 WNT8BQ93098 351 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 MFSD3Q96ES6 412 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 KLHDC7BQ96G42 594 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 TRIM47Q96LD4 638 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 MDFIQ99750 246 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 USP26Q9BXU7 913 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 NRSN2Q9GZP1 204 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 JPH1Q9HDC5 661 aaPredicted RBP5.27□□□□□ -1.57
GPNMB-205ENST00000463011 HOMER2Q9NSB8 354 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 GMPR2Q9P2T1 348 aaKnown RBP5.27□□□□□ -1.57
GPNMB-205ENST00000463011 SUGT1Q9Y2Z0 365 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 TACC3Q9Y6A5 838 aa5.27□□□□□ -1.57
GPNMB-205ENST00000463011 IQCA1LA6NCM1 817 aa5.26□□□□□ -1.57
GPNMB-205ENST00000463011 EIF4EBP3O60516 100 aaPredicted RBP5.26□□□□□ -1.57
GPNMB-205ENST00000463011 CDKN1CP49918 316 aaPredicted RBP5.26□□□□□ -1.57
GPNMB-205ENST00000463011 ETF1P62495 437 aaKnown RBP5.26□□□□□ -1.57
GPNMB-205ENST00000463011 PABPC4Q13310 644 aaKnown RBP eCLIP5.26□□□□□ -1.57
GPNMB-205ENST00000463011 LONRF2Q1L5Z9 754 aa5.26□□□□□ -1.57
GPNMB-205ENST00000463011 SV2CQ496J9 727 aa5.26□□□□□ -1.57
GPNMB-205ENST00000463011 CHAC2Q8WUX2 184 aa5.26□□□□□ -1.57
GPNMB-205ENST00000463011 JDP2Q8WYK2 163 aa5.26□□□□□ -1.57
GPNMB-205ENST00000463011 ACSF2Q96CM8 615 aaPredicted RBP5.26□□□□□ -1.57
GPNMB-205ENST00000463011 EPN3Q9H201 632 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms