RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 CCAR2Q8N163 923 aaKnown RBP13.39□□□□□ -0.27
RBM39-223ENST00000463004 FANCBQ8NB91 859 aa13.39□□□□□ -0.27
RBM39-223ENST00000463004 CHURC1Q8WUH1 139 aa13.39□□□□□ -0.27
RBM39-223ENST00000463004 NDUFB9Q9Y6M9 179 aa13.39□□□□□ -0.27
RBM39-223ENST00000463004 HSPA1LP34931 641 aa13.39□□□□□ -0.27
RBM39-223ENST00000463004 KRT40Q6A162 431 aa13.39□□□□□ -0.27
RBM39-223ENST00000463004 USP37Q86T82 979 aa13.39□□□□□ -0.27
RBM39-223ENST00000463004 ERCC4Q92889 916 aaPredicted RBP13.39□□□□□ -0.27
RBM39-223ENST00000463004 PALD1Q9ULE6 856 aa13.39□□□□□ -0.27
RBM39-223ENST00000463004 CYP21A2P08686 494 aa13.38□□□□□ -0.27
RBM39-223ENST00000463004 TRIM21P19474 475 aaKnown RBP13.38□□□□□ -0.27
RBM39-223ENST00000463004 ARID4AP29374 1257 aaPredicted RBP13.38□□□□□ -0.27
RBM39-223ENST00000463004 MINPP1Q9UNW1 487 aa13.38□□□□□ -0.27
RBM39-223ENST00000463004 V9GY48 417 aaPredicted RBP13.38□□□□□ -0.27
RBM39-223ENST00000463004 HS1BP3Q53T59 392 aa13.38□□□□□ -0.27
RBM39-223ENST00000463004 MAP7D2Q96T17 732 aa13.38□□□□□ -0.27
RBM39-223ENST00000463004 RIPOR2Q9Y4F9 1068 aa13.38□□□□□ -0.27
RBM39-223ENST00000463004 ADAMTSL3P82987 1691 aa13.38□□□□□ -0.27
RBM39-223ENST00000463004 DKC1O60832 514 aaKnown RBP eCLIP13.38□□□□□ -0.27
RBM39-223ENST00000463004 TUBB4AP04350 444 aa13.38□□□□□ -0.27
RBM39-223ENST00000463004 RASGRF1Q13972 1273 aa13.38□□□□□ -0.27
RBM39-223ENST00000463004 NONOQ15233 471 aaKnown RBP eCLIP13.38□□□□□ -0.27
RBM39-223ENST00000463004 TSGA10IPQ3SY00 556 aa13.38□□□□□ -0.27
RBM39-223ENST00000463004 ODF2Q5BJF6 829 aa13.38□□□□□ -0.27
RBM39-223ENST00000463004 CCDC24Q8N4L8 307 aa13.38□□□□□ -0.27
RBM39-223ENST00000463004 SEC62Q99442 399 aaKnown RBP13.38□□□□□ -0.27
RBM39-223ENST00000463004 ZKSCAN3Q9BRR0 538 aa13.38□□□□□ -0.27
RBM39-223ENST00000463004 JAG2Q9Y219 1238 aa13.38□□□□□ -0.27
RBM39-223ENST00000463004 BICDL2A1A5D9 508 aa13.37□□□□□ -0.27
RBM39-223ENST00000463004 IQCEQ6IPM2 695 aa13.37□□□□□ -0.27
RBM39-223ENST00000463004 FILIP1Q7Z7B0 1213 aa13.37□□□□□ -0.27
RBM39-223ENST00000463004 RNF26Q9BY78 433 aaPredicted RBP13.37□□□□□ -0.27
RBM39-223ENST00000463004 AS3MTQ9HBK9 375 aa13.37□□□□□ -0.27
RBM39-223ENST00000463004 TNKSO95271 1327 aa13.37□□□□□ -0.27
RBM39-223ENST00000463004 KDM6AO15550 1401 aaPredicted RBP13.37□□□□□ -0.27
RBM39-223ENST00000463004 SLC1A4P43007 532 aa13.37□□□□□ -0.27
RBM39-223ENST00000463004 PODNQ7Z5L7 613 aa13.37□□□□□ -0.27
RBM39-223ENST00000463004 POTEJP0CG39 1038 aa13.37□□□□□ -0.27
RBM39-223ENST00000463004 SLC4A8Q2Y0W8 1093 aa13.37□□□□□ -0.27
RBM39-223ENST00000463004 CCDC112Q8NEF3 446 aa13.37□□□□□ -0.27
RBM39-223ENST00000463004 TMOD4Q9NZQ9 345 aa13.37□□□□□ -0.27
RBM39-223ENST00000463004 CLIP2Q9UDT6 1046 aa13.37□□□□□ -0.27
RBM39-223ENST00000463004 MMP10P09238 476 aa13.37□□□□□ -0.27
RBM39-223ENST00000463004 GPATCH4Q5T3I0 446 aaKnown RBP13.37□□□□□ -0.27
RBM39-223ENST00000463004 SP8Q8IXZ3 490 aa13.37□□□□□ -0.27
RBM39-223ENST00000463004 ADCY7P51828 1080 aa13.36□□□□□ -0.27
RBM39-223ENST00000463004 TBC1D9BQ66K14 1250 aa13.36□□□□□ -0.27
RBM39-223ENST00000463004 OSBP2Q969R2 916 aa13.36□□□□□ -0.27
RBM39-223ENST00000463004 IDEP14735 1019 aa13.36□□□□□ -0.27
RBM39-223ENST00000463004 PDIA3P30101 505 aaKnown RBP13.36□□□□□ -0.27
RBM39-223ENST00000463004 KLHL10Q6JEL2 608 aa13.36□□□□□ -0.27
RBM39-223ENST00000463004 LEO1Q8WVC0 666 aaPredicted RBP13.36□□□□□ -0.27
RBM39-223ENST00000463004 TPCN1Q9ULQ1 816 aa13.36□□□□□ -0.27
RBM39-223ENST00000463004 NRXN3Q9Y4C0 1643 aa13.36□□□□□ -0.27
RBM39-223ENST00000463004 TRAPPC10P48553 1259 aa13.36□□□□□ -0.27
RBM39-223ENST00000463004 HAUS3Q68CZ6 603 aa13.36□□□□□ -0.27
RBM39-223ENST00000463004 TTC14Q96N46 770 aa13.36□□□□□ -0.27
RBM39-223ENST00000463004 STRBPQ96SI9 672 aaKnown RBP13.36□□□□□ -0.27
RBM39-223ENST00000463004 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.36□□□□□ -0.271e-13■■□□□ 13.9
RBM39-223ENST00000463004 NWD1Q149M9 1564 aa13.36□□□□□ -0.27
RBM39-223ENST00000463004 ZNF445P59923 1031 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 TYRO3Q06418 890 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 ASPRV1Q53RT3 343 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 TTC38Q5R3I4 469 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 TTLL6Q8N841 843 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 AKAP12Q02952 1782 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 NOM1Q5C9Z4 860 aaKnown RBP13.35□□□□□ -0.27
RBM39-223ENST00000463004 RASEFQ8IZ41 740 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 KCNQ2O43526 872 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 PRDM1O75626 825 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 MARCKSP29966 332 aaPredicted RBP13.35□□□□□ -0.27
RBM39-223ENST00000463004 MCAMP43121 646 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 ATG9AQ7Z3C6 839 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 FMNL3Q8IVF7 1028 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 PNMA1Q8ND90 353 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 CLSTN2Q9H4D0 955 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 WWC3Q9ULE0 1092 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 PNPLA7Q6ZV29 1317 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 M0R2C6 588 aa13.35□□□□□ -0.27
RBM39-223ENST00000463004 HOXA7P31268 230 aaPredicted RBP13.35□□□□□ -0.27
RBM39-223ENST00000463004 MTIF2P46199 727 aaKnown RBP13.35□□□□□ -0.27
RBM39-223ENST00000463004 FAM177A1Q8N128 213 aaPredicted RBP13.35□□□□□ -0.27
RBM39-223ENST00000463004 NCOA5Q9HCD5 579 aaKnown RBP13.35□□□□□ -0.27
RBM39-223ENST00000463004 CCDC172P0C7W6 258 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 DESP17661 470 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 SPA17Q15506 151 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 ZNF589Q86UQ0 364 aaPredicted RBP13.34□□□□□ -0.27
RBM39-223ENST00000463004 PDCL3Q9H2J4 239 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 MYSM1Q5VVJ2 828 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 FOXP4Q8IVH2 680 aaPredicted RBP13.34□□□□□ -0.27
RBM39-223ENST00000463004 PIH1D3Q9NQM4 214 aaKnown RBP13.34□□□□□ -0.27
RBM39-223ENST00000463004 MTMR6Q9Y217 621 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 ZNF142P52746 1687 aaPredicted RBP13.34□□□□□ -0.27
RBM39-223ENST00000463004 NFIXQ14938 502 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 DGKHQ86XP1 1220 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 ANTXR1Q9H6X2 564 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 KCNG1Q9UIX4 513 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 BCL9O00512 1426 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 ZBED4O75132 1171 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 RXRAP19793 462 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms