RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 FCGRTP55899 365 aa7.36□□□□□ -1.23
COPS3-204ENST00000462236 TAF1CQ15572 869 aaPredicted RBP7.36□□□□□ -1.23
COPS3-204ENST00000462236 MAP4K3Q8IVH8 894 aa7.36□□□□□ -1.23
COPS3-204ENST00000462236 SVOPQ8N4V2 548 aa7.36□□□□□ -1.23
COPS3-204ENST00000462236 ASAP3Q8TDY4 903 aa7.36□□□□□ -1.23
COPS3-204ENST00000462236 DCAF11Q8TEB1 546 aa7.36□□□□□ -1.23
COPS3-204ENST00000462236 HHIPQ96QV1 700 aa7.36□□□□□ -1.23
COPS3-204ENST00000462236 CEP44Q9C0F1 390 aa7.36□□□□□ -1.23
COPS3-204ENST00000462236 CLEC4MQ9H2X3 399 aaPredicted RBP7.36□□□□□ -1.23
COPS3-204ENST00000462236 ZNF576Q9H609 170 aa7.36□□□□□ -1.23
COPS3-204ENST00000462236 TRIM33Q9UPN9 1127 aa7.36□□□□□ -1.23
COPS3-204ENST00000462236 C1orf167Q5SNV9 1468 aa7.36□□□□□ -1.23
COPS3-204ENST00000462236 PRAG1Q86YV5 1406 aa7.35□□□□□ -1.23
COPS3-204ENST00000462236 TRPA1O75762 1119 aa7.35□□□□□ -1.23
COPS3-204ENST00000462236 DGKGP49619 791 aa7.35□□□□□ -1.23
COPS3-204ENST00000462236 LDLRAD1Q5T700 205 aa7.35□□□□□ -1.23
COPS3-204ENST00000462236 DTWD1Q8N5C7 304 aa7.35□□□□□ -1.23
COPS3-204ENST00000462236 NEDD1Q8NHV4 660 aa7.35□□□□□ -1.23
COPS3-204ENST00000462236 DDX54Q8TDD1 881 aaKnown RBP7.35□□□□□ -1.23
COPS3-204ENST00000462236 WHAMMQ8TF30 809 aa7.35□□□□□ -1.23
COPS3-204ENST00000462236 NUDT8Q8WV74 236 aa7.35□□□□□ -1.23
COPS3-204ENST00000462236 DDX17Q92841 729 aaKnown RBP7.35□□□□□ -1.23
COPS3-204ENST00000462236 NOC4LQ9BVI4 516 aaKnown RBP7.35□□□□□ -1.23
COPS3-204ENST00000462236 SOX17Q9H6I2 414 aaPredicted RBP7.35□□□□□ -1.23
COPS3-204ENST00000462236 IGSF5Q9NSI5 407 aa7.35□□□□□ -1.23
COPS3-204ENST00000462236 TRPC5Q9UL62 973 aaPredicted RBP7.35□□□□□ -1.23
COPS3-204ENST00000462236 PPME1Q9Y570 386 aa7.35□□□□□ -1.23
COPS3-204ENST00000462236 KIF1BO60333 1816 aa7.35□□□□□ -1.23
COPS3-204ENST00000462236 RLBP1P12271 317 aa7.34□□□□□ -1.23
COPS3-204ENST00000462236 INSM1Q01101 510 aaPredicted RBP7.34□□□□□ -1.23
COPS3-204ENST00000462236 SPRED3Q2MJR0 410 aa7.34□□□□□ -1.23
COPS3-204ENST00000462236 TSNAXIP1Q2TAA8 658 aa7.34□□□□□ -1.23
COPS3-204ENST00000462236 MSL1Q68DK7 614 aa7.34□□□□□ -1.23
COPS3-204ENST00000462236 GDF6Q6KF10 455 aaPredicted RBP7.34□□□□□ -1.23
COPS3-204ENST00000462236 FAM117BQ6P1L5 589 aa7.34□□□□□ -1.23
COPS3-204ENST00000462236 SV2BQ7L1I2 683 aa7.34□□□□□ -1.23
COPS3-204ENST00000462236 VN1R5Q7Z5H4 357 aa7.34□□□□□ -1.23
COPS3-204ENST00000462236 WFDC8Q8IUA0 241 aa7.34□□□□□ -1.23
COPS3-204ENST00000462236 IL22RA1Q8N6P7 574 aa7.34□□□□□ -1.23
COPS3-204ENST00000462236 TMEM87AQ8NBN3 555 aa7.34□□□□□ -1.23
COPS3-204ENST00000462236 NWD2Q9ULI1 1742 aa7.34□□□□□ -1.23
COPS3-204ENST00000462236 ANKRD50Q9ULJ7 1429 aa7.34□□□□□ -1.23
COPS3-204ENST00000462236 METP08581 1390 aa7.33□□□□□ -1.24
COPS3-204ENST00000462236 NEXMIFQ5QGS0 1516 aa7.33□□□□□ -1.24
COPS3-204ENST00000462236 ABCA3Q99758 1704 aa7.33□□□□□ -1.24
COPS3-204ENST00000462236 H3BRJ5 948 aa7.33□□□□□ -1.24
COPS3-204ENST00000462236 B3GALT4O96024 378 aa7.33□□□□□ -1.24
COPS3-204ENST00000462236 NID1P14543 1247 aa7.33□□□□□ -1.24
COPS3-204ENST00000462236 TCF3P15923 654 aa7.33□□□□□ -1.24
COPS3-204ENST00000462236 HOXB4P17483 251 aaPredicted RBP7.33□□□□□ -1.24
COPS3-204ENST00000462236 BAG6P46379 1132 aa7.33□□□□□ -1.24
COPS3-204ENST00000462236 USP21Q9UK80 565 aa7.33□□□□□ -1.24
COPS3-204ENST00000462236 AKAP2Q9Y2D5 859 aa7.33□□□□□ -1.24
COPS3-204ENST00000462236 BLMP54132 1417 aaPredicted RBP7.33□□□□□ -1.24
COPS3-204ENST00000462236 RGPD8O14715 1765 aaPredicted RBP7.33□□□□□ -1.24
COPS3-204ENST00000462236 SLIT2O94813 1529 aa7.32□□□□□ -1.24
COPS3-204ENST00000462236 PXDNQ92626 1479 aa7.32□□□□□ -1.24
COPS3-204ENST00000462236 SPDYE3A6NKU9 549 aa7.32□□□□□ -1.24
COPS3-204ENST00000462236 METTL12A8MUP2 240 aa7.32□□□□□ -1.24
COPS3-204ENST00000462236 PPP2R3AQ06190 1150 aa7.32□□□□□ -1.24
COPS3-204ENST00000462236 PCDH1Q08174 1060 aa7.32□□□□□ -1.24
COPS3-204ENST00000462236 COL9A3Q14050 684 aaPredicted RBP7.32□□□□□ -1.24
COPS3-204ENST00000462236 ZSCAN1Q8NBB4 408 aa7.32□□□□□ -1.24
COPS3-204ENST00000462236 LACRTQ9GZZ8 138 aa7.32□□□□□ -1.24
COPS3-204ENST00000462236 OSGEPQ9NPF4 335 aa7.32□□□□□ -1.24
COPS3-204ENST00000462236 PLCH1Q4KWH8 1693 aa7.32□□□□□ -1.24
COPS3-204ENST00000462236 PPLO60437 1756 aa7.31□□□□□ -1.24
COPS3-204ENST00000462236 GNB5O14775 395 aa7.31□□□□□ -1.24
COPS3-204ENST00000462236 RGPD1P0DJD0 1748 aa7.31□□□□□ -1.24
COPS3-204ENST00000462236 ESRRAP11474 423 aaPredicted RBP7.31□□□□□ -1.24
COPS3-204ENST00000462236 ZNF76P36508 570 aa7.31□□□□□ -1.24
COPS3-204ENST00000462236 ARL4DP49703 201 aa7.31□□□□□ -1.24
COPS3-204ENST00000462236 IKBKEQ14164 716 aa7.31□□□□□ -1.24
COPS3-204ENST00000462236 RRAGCQ9HB90 399 aa7.31□□□□□ -1.24
COPS3-204ENST00000462236 TNS1Q9HBL0 1735 aaKnown RBP7.31□□□□□ -1.24
COPS3-204ENST00000462236 TMEM39AQ9NV64 488 aa7.31□□□□□ -1.24
COPS3-204ENST00000462236 MKL2Q9ULH7 1088 aa7.31□□□□□ -1.24
COPS3-204ENST00000462236 TTF2Q9UNY4 1162 aaKnown RBP7.31□□□□□ -1.24
COPS3-204ENST00000462236 CLTCL1P53675 1640 aa7.3□□□□□ -1.24
COPS3-204ENST00000462236 USP32Q8NFA0 1604 aa7.3□□□□□ -1.24
COPS3-204ENST00000462236 CDC42BPGQ6DT37 1551 aa7.3□□□□□ -1.24
COPS3-204ENST00000462236 EPHA1P21709 976 aa7.3□□□□□ -1.24
COPS3-204ENST00000462236 FANCCQ00597 558 aa7.3□□□□□ -1.24
COPS3-204ENST00000462236 PWP1Q13610 501 aa7.3□□□□□ -1.24
COPS3-204ENST00000462236 SCARA3Q6AZY7 606 aa7.3□□□□□ -1.24
COPS3-204ENST00000462236 ADAMTSL4Q6UY14 1074 aa7.3□□□□□ -1.24
COPS3-204ENST00000462236 LINC00114Q6XXX2 140 aa7.3□□□□□ -1.24
COPS3-204ENST00000462236 KLHL23Q8NBE8 558 aa7.3□□□□□ -1.24
COPS3-204ENST00000462236 RNF34Q969K3 372 aa7.3□□□□□ -1.24
COPS3-204ENST00000462236 NECAB3Q96P71 396 aaPredicted RBP7.3□□□□□ -1.24
COPS3-204ENST00000462236 SEC31BQ9NQW1 1179 aa7.3□□□□□ -1.24
COPS3-204ENST00000462236 SH2B1Q9NRF2 756 aaPredicted RBP7.3□□□□□ -1.24
COPS3-204ENST00000462236 SAMM50Q9Y512 469 aa7.3□□□□□ -1.24
COPS3-204ENST00000462236 RALGAPBQ86X10 1494 aa7.3□□□□□ -1.24
COPS3-204ENST00000462236 NRAPQ86VF7 1730 aa7.3□□□□□ -1.24
COPS3-204ENST00000462236 CHD4Q14839 1912 aa7.29□□□□□ -1.24
COPS3-204ENST00000462236 LORP23490 312 aaPredicted RBP7.29□□□□□ -1.24
COPS3-204ENST00000462236 CCDC85BQ15834 202 aaPredicted RBP7.29□□□□□ -1.24
COPS3-204ENST00000462236 ZNF423Q2M1K9 1284 aa7.29□□□□□ -1.24
COPS3-204ENST00000462236 MEI1Q5TIA1 1274 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms