RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 GRIA4P48058 902 aa8.25□□□□□ -1.09
THUMPD3-207ENST00000461636 PDE3BQ13370 1112 aa8.25□□□□□ -1.09
THUMPD3-207ENST00000461636 MAP7Q14244 749 aa8.25□□□□□ -1.09
THUMPD3-207ENST00000461636 MSMPQ1L6U9 139 aa8.25□□□□□ -1.09
THUMPD3-207ENST00000461636 ZAR1Q86SH2 424 aa8.25□□□□□ -1.09
THUMPD3-207ENST00000461636 VSIG10LQ86VR7 867 aa8.25□□□□□ -1.09
THUMPD3-207ENST00000461636 CORO1BQ9BR76 489 aa8.25□□□□□ -1.09
THUMPD3-207ENST00000461636 RNF114Q9Y508 228 aa8.25□□□□□ -1.09
THUMPD3-207ENST00000461636 MROH2AA6NES4 1674 aa8.24□□□□□ -1.09
THUMPD3-207ENST00000461636 RIMS1Q86UR5 1692 aaKnown RBP8.24□□□□□ -1.09
THUMPD3-207ENST00000461636 ROCK1Q13464 1354 aa8.24□□□□□ -1.09
THUMPD3-207ENST00000461636 ERBINQ96RT1 1412 aa8.24□□□□□ -1.09
THUMPD3-207ENST00000461636 ZNF423Q2M1K9 1284 aa8.24□□□□□ -1.09
THUMPD3-207ENST00000461636 SPRED3Q2MJR0 410 aa8.24□□□□□ -1.09
THUMPD3-207ENST00000461636 KRTAP19-1Q8IUB9 90 aa8.24□□□□□ -1.09
THUMPD3-207ENST00000461636 RAD18Q9NS91 495 aa8.24□□□□□ -1.09
THUMPD3-207ENST00000461636 PRKAG2Q9UGJ0 569 aa8.24□□□□□ -1.09
THUMPD3-207ENST00000461636 ACTL7BQ9Y614 415 aa8.24□□□□□ -1.09
THUMPD3-207ENST00000461636 PRDM15P57071 1507 aaPredicted RBP8.24□□□□□ -1.09
THUMPD3-207ENST00000461636 KDM5DQ9BY66 1539 aa8.24□□□□□ -1.09
THUMPD3-207ENST00000461636 KIF15Q9NS87 1388 aa8.23□□□□□ -1.09
THUMPD3-207ENST00000461636 VWDEQ8N2E2 1590 aa8.23□□□□□ -1.09
THUMPD3-207ENST00000461636 BTBD11A6QL63 1104 aa8.23□□□□□ -1.09
THUMPD3-207ENST00000461636 CYP26A1O43174 497 aa8.23□□□□□ -1.09
THUMPD3-207ENST00000461636 B3GALT4O96024 378 aa8.23□□□□□ -1.09
THUMPD3-207ENST00000461636 RAB6AP20340 208 aa8.23□□□□□ -1.09
THUMPD3-207ENST00000461636 CYP27A1Q02318 531 aa8.23□□□□□ -1.09
THUMPD3-207ENST00000461636 KIAA0319Q5VV43 1072 aa8.23□□□□□ -1.09
THUMPD3-207ENST00000461636 FBXL18Q96ME1 805 aa8.23□□□□□ -1.09
THUMPD3-207ENST00000461636 EHD4Q9H223 541 aa8.23□□□□□ -1.09
THUMPD3-207ENST00000461636 ADGRE2Q9UHX3 823 aa8.23□□□□□ -1.09
THUMPD3-207ENST00000461636 PTPRMP28827 1452 aa8.23□□□□□ -1.09
THUMPD3-207ENST00000461636 C3P01024 1663 aa8.22□□□□□ -1.09
THUMPD3-207ENST00000461636 GCC2Q8IWJ2 1684 aa8.22□□□□□ -1.09
THUMPD3-207ENST00000461636 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.22□□□□□ -1.09
THUMPD3-207ENST00000461636 CPNE3O75131 537 aaKnown RBP8.22□□□□□ -1.09
THUMPD3-207ENST00000461636 PRNPP04156 253 aa8.22□□□□□ -1.09
THUMPD3-207ENST00000461636 TSPY4P0CV99 314 aa8.22□□□□□ -1.09
THUMPD3-207ENST00000461636 TSPY10P0CW01 314 aa8.22□□□□□ -1.09
THUMPD3-207ENST00000461636 RBM25P49756 843 aaKnown RBP8.22□□□□□ -1.09
THUMPD3-207ENST00000461636 AKAP4Q5JQC9 854 aa8.22□□□□□ -1.09
THUMPD3-207ENST00000461636 DYMQ7RTS9 669 aa8.22□□□□□ -1.09
THUMPD3-207ENST00000461636 CCDC39Q9UFE4 941 aa8.22□□□□□ -1.09
THUMPD3-207ENST00000461636 AP4E1Q9UPM8 1137 aa8.22□□□□□ -1.09
THUMPD3-207ENST00000461636 ANKRD30AQ9BXX3 1397 aa8.22□□□□□ -1.09
THUMPD3-207ENST00000461636 ZC3H13Q5T200 1668 aaKnown RBP8.21□□□□□ -1.09
THUMPD3-207ENST00000461636 ITPKAP23677 461 aa8.21□□□□□ -1.1
THUMPD3-207ENST00000461636 SERPINB4P48594 390 aa8.21□□□□□ -1.1
THUMPD3-207ENST00000461636 PDE4CQ08493 712 aa8.21□□□□□ -1.1
THUMPD3-207ENST00000461636 FAM50AQ14320 339 aaKnown RBP8.21□□□□□ -1.1
THUMPD3-207ENST00000461636 DUSP27Q5VZP5 1158 aa8.21□□□□□ -1.1
THUMPD3-207ENST00000461636 USPL1Q5W0Q7 1092 aa8.21□□□□□ -1.1
THUMPD3-207ENST00000461636 ABI1Q8IZP0 508 aa8.21□□□□□ -1.1
THUMPD3-207ENST00000461636 ZNF576Q9H609 170 aa8.21□□□□□ -1.1
THUMPD3-207ENST00000461636 NPHS2Q9NP85 383 aa8.21□□□□□ -1.1
THUMPD3-207ENST00000461636 BSDC1Q9NW68 430 aaPredicted RBP8.21□□□□□ -1.1
THUMPD3-207ENST00000461636 UNC13BO14795 1591 aa8.21□□□□□ -1.1
THUMPD3-207ENST00000461636 CLTCQ00610 1675 aaKnown RBP8.21□□□□□ -1.1
THUMPD3-207ENST00000461636 ABCC3O15438 1527 aa8.2□□□□□ -1.1
THUMPD3-207ENST00000461636 PATL2C9JE40 543 aaKnown RBP8.2□□□□□ -1.1
THUMPD3-207ENST00000461636 CTSBP07858 339 aa8.2□□□□□ -1.1
THUMPD3-207ENST00000461636 NFICP08651 508 aa8.2□□□□□ -1.1
THUMPD3-207ENST00000461636 ADMP35318 185 aa8.2□□□□□ -1.1
THUMPD3-207ENST00000461636 HNRNPUQ00839 825 aaKnown RBP eCLIP8.2□□□□□ -1.1
THUMPD3-207ENST00000461636 AP3B2Q13367 1082 aa8.2□□□□□ -1.1
THUMPD3-207ENST00000461636 CITED4Q96RK1 184 aa8.2□□□□□ -1.1
THUMPD3-207ENST00000461636 TRIM56Q9BRZ2 755 aaKnown RBP8.2□□□□□ -1.1
THUMPD3-207ENST00000461636 SEMA6CQ9H3T2 930 aa8.2□□□□□ -1.1
THUMPD3-207ENST00000461636 CNTLNQ9NXG0 1405 aa8.2□□□□□ -1.1
THUMPD3-207ENST00000461636 LMTK2Q8IWU2 1503 aa8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 SETD1BQ9UPS6 1966 aaKnown RBP8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 FAM170BA6NMN3 283 aa8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 IGSF3O75054 1194 aa8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 YBX3P16989 372 aaKnown RBP eCLIP8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 PTPN12Q05209 780 aaKnown RBP8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 PDE3AQ14432 1141 aa8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 TP53INP2Q8IXH6 220 aa8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 SHISA5Q8N114 240 aa8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 FAM129BQ96TA1 746 aa8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 ACSS3Q9H6R3 686 aa8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 FAM105AQ9NUU6 356 aa8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 CEP152O94986 1710 aa8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 ARID4BQ4LE39 1312 aaPredicted RBP8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 HFM1A2PYH4 1435 aa8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 NAIPQ13075 1403 aa8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 ANKRD50Q9ULJ7 1429 aa8.19□□□□□ -1.1
THUMPD3-207ENST00000461636 ASPAP45381 313 aa8.18□□□□□ -1.1
THUMPD3-207ENST00000461636 ARHGAP4P98171 946 aa8.18□□□□□ -1.1
THUMPD3-207ENST00000461636 ORC1Q13415 861 aa8.18□□□□□ -1.1
THUMPD3-207ENST00000461636 DNAJC25Q9H1X3 360 aa8.18□□□□□ -1.1
THUMPD3-207ENST00000461636 AGBL5Q8NDL9 886 aa8.17□□□□□ -1.1
THUMPD3-207ENST00000461636 FLCNQ8NFG4 579 aa8.17□□□□□ -1.1
THUMPD3-207ENST00000461636 TMC1Q8TDI8 760 aa8.17□□□□□ -1.1
THUMPD3-207ENST00000461636 GATA6Q92908 595 aa8.17□□□□□ -1.1
THUMPD3-207ENST00000461636 LRRC4CQ9HCJ2 640 aa8.17□□□□□ -1.1
THUMPD3-207ENST00000461636 RRP7BPQ9NSQ0 103 aa8.17□□□□□ -1.1
THUMPD3-207ENST00000461636 TRAK1Q9UPV9 953 aa8.17□□□□□ -1.1
THUMPD3-207ENST00000461636 DAGLAQ9Y4D2 1042 aa8.17□□□□□ -1.1
THUMPD3-207ENST00000461636 SYNGAP1Q96PV0 1343 aa8.17□□□□□ -1.1
THUMPD3-207ENST00000461636 CAMSAP1Q5T5Y3 1602 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms