RNA–Protein interactions for RNA: ENST00000461595.5

SCUBE1-204, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 3

Gene SCUBE1, Length 530 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-204ENST00000461595 FOXP4Q8IVH2 680 aaPredicted RBP9.39□□□□□ -0.91
SCUBE1-204ENST00000461595 ZC3H15Q8WU90 426 aaKnown RBP9.39□□□□□ -0.91
SCUBE1-204ENST00000461595 NEK1Q96PY6 1258 aa9.39□□□□□ -0.91
SCUBE1-204ENST00000461595 KRT23Q9C075 422 aa9.39□□□□□ -0.91
SCUBE1-204ENST00000461595 VEZTQ9HBM0 779 aa9.39□□□□□ -0.91
SCUBE1-204ENST00000461595 DDX4Q9NQI0 724 aaKnown RBP9.39□□□□□ -0.91
SCUBE1-204ENST00000461595 TSHZ2Q9NRE2 1034 aa9.39□□□□□ -0.91
SCUBE1-204ENST00000461595 SAP30BPQ9UHR5 308 aaKnown RBP9.39□□□□□ -0.91
SCUBE1-204ENST00000461595 PALD1Q9ULE6 856 aa9.39□□□□□ -0.91
SCUBE1-204ENST00000461595 COL2A1P02458 1487 aaPredicted RBP9.39□□□□□ -0.91
SCUBE1-204ENST00000461595 ATRNL1Q5VV63 1379 aa9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 PITPNM2Q9BZ72 1349 aa9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 ADAMTSL1Q8N6G6 1762 aa9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 EGFRP00533 1210 aa9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 FGRP09769 529 aa9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 CTDSPL2Q05D32 466 aa9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 TCP10Q12799 353 aa9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 RALYLQ86SE5 291 aaKnown RBP9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 ZSCAN29Q8IWY8 852 aaPredicted RBP9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 NCOA7Q8NI08 942 aa9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 TRPM4Q8TD43 1214 aa9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 STAG1Q8WVM7 1258 aa9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 DCPSQ96C86 337 aaKnown RBP9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 JAKMIP1Q96N16 626 aaKnown RBP9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 KIF2CQ99661 725 aa9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 EHD4Q9H223 541 aa9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 ZSWIM6Q9HCJ5 1215 aa9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 PI4KBQ9UBF8 816 aa9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 SWAP70Q9UH65 585 aa9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 CYP46A1Q9Y6A2 500 aa9.38□□□□□ -0.91
SCUBE1-204ENST00000461595 ROBO3Q96MS0 1386 aa9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 CYP2D7A0A087X1C5 515 aa9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 PLCD1P51178 756 aa9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 HIRAP54198 1017 aaPredicted RBP9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 RASA3Q14644 834 aa9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 ANGEL2Q5VTE6 544 aaKnown RBP9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 BLOC1S2Q6QNY1 142 aa9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 RUFY3Q7L099 469 aa9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 ZFPM1Q8IX07 1006 aa9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 CRACR2BQ8N4Y2 399 aaPredicted RBP9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 ESR2Q92731 530 aa9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 HOOK2Q96ED9 719 aa9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 TRIM34Q9BYJ4 488 aa9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 NBPF3Q9H094 633 aa9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 TAF1DQ9H5J8 278 aaPredicted RBP9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 MKNK2Q9HBH9 465 aa9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 PGAP2Q9UHJ9 254 aa9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 SERPINB13Q9UIV8 391 aa9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 PPP2R3BQ9Y5P8 575 aa9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 ECM29Q5VYK3 1845 aa9.37□□□□□ -0.91
SCUBE1-204ENST00000461595 WDR19Q8NEZ3 1342 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 SCN4AP35499 1836 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 FOCADQ5VW36 1801 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 DDTLA6NHG4 134 aaPredicted RBP9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 ORC4O43929 436 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 ST18O60284 1047 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 CYP2D6P10635 497 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 CASTP20810 708 aaKnown RBP9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 RPS6KB1P23443 525 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 MCM5P33992 734 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 NEK4P51957 841 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 ADCK5Q3MIX3 580 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 C16orf86Q6ZW13 317 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 DHX32Q7L7V1 743 aaKnown RBP9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 METTL16Q86W50 562 aaKnown RBP9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 TBC1D10CQ8IV04 446 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 ZNF444Q8N0Y2 327 aaPredicted RBP9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 CSRNP1Q96S65 589 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 MTA3Q9BTC8 594 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 DEFB129Q9H1M3 183 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 ALDH8A1Q9H2A2 487 aaPredicted RBP9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 TOMM22Q9NS69 142 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 GGA3Q9NZ52 723 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 HERC5Q9UII4 1024 aaKnown RBP9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 RBM19Q9Y4C8 960 aaKnown RBP9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 TAF6LQ9Y6J9 622 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 NAV1Q8NEY1 1877 aa9.36□□□□□ -0.91
SCUBE1-204ENST00000461595 TBC1D12O60347 775 aa9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 ANP32AP39687 249 aaKnown RBP9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 CDK8P49336 464 aa9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 EXOSC10Q01780 885 aaKnown RBP9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 GABPAQ06546 454 aa9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 ANKRD1Q15327 319 aa9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 SLC4A8Q2Y0W8 1093 aa9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 SUPT20HL1Q3ZLR7 823 aa9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 CCDC178Q5BJE1 867 aa9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 DDX60LQ5H9U9 1706 aaKnown RBP9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 RRP12Q5JTH9 1297 aaKnown RBP9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 STOX1Q6ZVD7 989 aa9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 SH3BP5LQ7L8J4 393 aa9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 SULF1Q8IWU6 871 aa9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 DYNLL2Q96FJ2 89 aa9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 TMEM39BQ9GZU3 492 aa9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 PDRG1Q9NUG6 133 aa9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 LAMA4Q16363 1823 aa9.35□□□□□ -0.91
SCUBE1-204ENST00000461595 ASTN2O75129 1339 aaPredicted RBP9.34□□□□□ -0.91
SCUBE1-204ENST00000461595 NEDD4P46934 1319 aa9.34□□□□□ -0.91
SCUBE1-204ENST00000461595 CDK5RAP2Q96SN8 1893 aa9.34□□□□□ -0.91
SCUBE1-204ENST00000461595 B4E1Z4 1266 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms